Cervus canadensis (wapiti): 122429599
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Entry
122429599 CDS
T07554
Symbol
POU5F1
Name
(RefSeq) POU domain, class 5, transcription factor 1
KO
K09367
POU domain transcription factor, class 5
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
122429599 (POU5F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122429599 (POU5F1)
03021 Transcription machinery [BR:
ccad03021
]
122429599 (POU5F1)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
122429599 (POU5F1)
Transcription machinery [BR:
ccad03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
122429599 (POU5F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
AcnX
HOCHOB
Motif
Other DBs
NCBI-GeneID:
122429599
NCBI-ProteinID:
XP_043306007
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All DBs
Position
28:19919014..19923850
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AA seq
360 aa
AA seq
DB search
MAGHLASDFAFSPPPGGGGDGPGGSEPGWVDPRTWMSFQGPPGGSGIGPGVVPSAEVWGL
PPCTPPYDLCGGMAYCAPQVGVGPVPPGGLETPQPESKAGAGVESNSEGASPDPCAAPAG
AAKLEEEKLEPNPEESQDIKALQKDLEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFS
QTTICRFEALQLSFKNMCKLRPLLQKWVEEADNNENLQEICKAETLVQARKRKRTSIENR
VRGNLESLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSNDYSQREDFEA
AGSPFAGRPVSFPLAPGPHFGTPGYGGPHFTTLYSSVPFPEGEAFPSVSVTALGSPMHSN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacacctcgcttctgacttcgccttctcgcccccgccgggcggtggaggtgat
gggccgggagggtcagagccgggctgggttgatcctcggacctggatgagcttccaaggg
cctcccggtgggtcggggatcgggccgggggttgtgcccagcgccgaggtgtgggggctt
cctccgtgcaccccgccctatgacttgtgcggagggatggcctactgtgcgccgcaggtt
ggagtggggccggtgcccccaggcggcctggagacccctcaacccgagagcaaggcggga
gccggggtggagagcaactccgagggggcctccccggacccctgcgccgcccccgcaggc
gccgcgaagctggaggaggagaagctggagccgaaccctgaggagtcccaggacatcaaa
gctcttcagaaagaccttgaacaatttgccaagctcctaaagcagaagaggatcacccta
ggatatacccaggccgatgtggggctcaccctgggggttctctttggaaaggtgttcagc
caaacgactatctgccgttttgaggctttgcagctcagtttcaagaacatgtgtaagctg
cggcccctgctgcagaagtgggtggaggaagctgacaacaacgagaatctgcaggagata
tgcaaggcagagacccttgtgcaggcccggaagagaaagcggacaagtattgagaaccga
gtgagaggcaacctggagagtctgttcctgcagtgcccaaagcccaccctgcagcaaatt
agccacatcgcccagcagctcgggctggagaaggatgtggtccgagtgtggttctgcaac
cgtcgccagaagggcaaacgatcaagcaatgactactcccaacgagaggattttgaggct
gctgggtctcctttcgcagggagacccgtatcctttcctctggcgccagggccccatttt
ggtaccccaggctacgggggccctcacttcactacgctgtactcttcggtcccattccct
gagggtgaggcctttccctcggtgtctgtcaccgctctgggctctcctatgcattcaaac
tga
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