Cervus canadensis (wapiti): 122429961
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Entry
122429961 CDS
T07554
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122429961 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccad04121
]
122429961 (NHLRC1)
Enzymes [BR:
ccad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122429961 (NHLRC1)
Ubiquitin system [BR:
ccad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122429961 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
Baculo_IE-1
zf-C3HC4_4
Prok-RING_4
Beta-prop_EML_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
122429961
NCBI-ProteinID:
XP_043306620
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All DBs
Position
28:complement(12375479..12376894)
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AA seq
394 aa
AA seq
DB search
MGAEASGSRPELRELLREAETSLLECKVCFERFGHRQQRRPRNLSCGHVVCLACVAALAH
PRTLALECPFCRRACRGCDTSDCLPVLHLLELLGSALRPGPAAPRAAPAAPGVLTCQHAF
GGWGTLVNPTGLALCPKTGRVVVVHDGKRRVKVFDSGGGCAHQFGEKGDAAQDLRYPLDV
TVTNDCHVVVTDAGDRSLKVFDFFGQIKLVLGGHFCLPWGVETTPQNGVLVTDAEAGSLH
LLEVDFPEGILRRTERLQAHLRRPRGVAVSWLTGAIAVLEHPLGPGACSSTTVKVFSATM
QLIGQVDSFGLSLFFPSKITASAVAFDHQGNVVVADTSSPAVLCLGKPEEFPVLKPIITH
GLSHPVALTFTKESSLLVLDSAAHSVKVYKVDWG
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgaggcctcagggagccggccggagctgcgggagctgctgcgcgaggccgag
accagcctgctcgagtgcaaggtgtgcttcgagcggttcggccaccgccagcagcggcgc
ccgcgcaacctgtcctgcggccacgtggtctgcctggcctgcgtggccgccctggcgcac
ccgcggacgctggccctcgagtgccccttctgccggcgggcctgccgcggctgcgacacc
agcgactgccttccggtgctccacctcctggagctcctgggctccgcgctgcgccccggc
ccggccgccccgcgcgccgcccccgccgccccgggggtcctcacctgccagcacgccttc
ggcggctgggggaccctggtcaaccccaccgggctggcgctgtgtcccaagacggggcgg
gtcgtggtggtgcacgacggcaagaggagagtcaaggtcttcgactccgggggaggctgt
gcgcatcagtttggagagaagggggatgctgcccaggaccttcggtacccgcttgacgtc
acggtcaccaacgactgccacgtggtcgtcaccgacgccggcgaccgctccctcaaagtg
tttgactttttcggccagatcaaactcgtcttgggaggccacttctgcttgccgtggggt
gtggagaccaccccgcagaatggggtcttggtcacggacgcggaggcggggtccctgcac
ctcctggaagtcgactttcccgaagggatcctccggaggaccgaacggttgcaggctcac
ctgcgtcgcccgcggggggtggcggtgtcctggctcaccggggccatcgcggtcctcgag
cacccgctggggcccggcgcctgcagcagcaccacggtgaaggtgttcagcgcgaccatg
cagctcatcggccaggtggactccttcgggctgagcctctttttcccttccaagatcacc
gcctccgccgtggccttcgatcaccagggcaacgtcgtggttgcggatacttccagtccg
gctgtcctctgtctaggcaaacccgaggagtttccagtgctgaagcccatcatcacccac
ggtctttcgcatcccgtggcgctgaccttcaccaaggagagttctcttcttgtgctggac
agcgcggcccattctgtaaaagtctacaaggttgactgggggtga
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integrated database retrieval system
