Cervus canadensis (wapiti): 122430564
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Entry
122430564 CDS
T07554
Symbol
LRP5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04150
mTOR signaling pathway
ccad04310
Wnt signaling pathway
ccad04928
Parathyroid hormone synthesis, secretion and action
ccad05010
Alzheimer disease
ccad05022
Pathways of neurodegeneration - multiple diseases
ccad05200
Pathways in cancer
ccad05224
Breast cancer
ccad05225
Hepatocellular carcinoma
ccad05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122430564 (LRP5)
04150 mTOR signaling pathway
122430564 (LRP5)
09150 Organismal Systems
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
122430564 (LRP5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122430564 (LRP5)
09162 Cancer: specific types
05225 Hepatocellular carcinoma
122430564 (LRP5)
05226 Gastric cancer
122430564 (LRP5)
05224 Breast cancer
122430564 (LRP5)
09164 Neurodegenerative disease
05010 Alzheimer disease
122430564 (LRP5)
05022 Pathways of neurodegeneration - multiple diseases
122430564 (LRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122430564 (LRP5)
Membrane trafficking [BR:
ccad04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
122430564 (LRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
EGF_LRP2
SGL
Insulin_TMD
EGF
Motif
Other DBs
NCBI-GeneID:
122430564
NCBI-ProteinID:
XP_043307137
LinkDB
All DBs
Position
29:43172435..43291161
Genome browser
AA seq
1626 aa
AA seq
DB search
MEAAPPRSPAPPPPPPLLLLLALCCSLAPAAASPLLLFANRRDVRLVDAGGVKVESTIVV
SGLEDAAAVDFQFSKGAVYWTDVSEEAIKQTYLNQTGAAVQNVVISGLVSPDGLACDWVG
KKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGETPRIERA
GMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTH
PFALTLSGDTLYWTDWQTRSIHACNKRTGDKRKEILSALYSPMDIQVLSPERQPYYHTRC
EEDNGGCSHLCLLSPREPFYACACPTGVQLQDNGQTCKAGAEEVLLLARRTDLRRISLDT
PDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEINDPD
GIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGLMYWTDWG
ENPKIECANLDGQERHVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVINVDGTKRRT
LLEDKLPHIFGFTLLGDFIYWTDWQRRSIERVHKVKASRDVIIDQLPDLMGLKAVNVAKV
VGTNPCADGNGGCSHLCFFTPRATKCGCPIGLELLSDMKTCIVPEAFLVFTSRAAIHRIS
LDTNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEHVIEFGLDY
PEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPTKGYIYWTE
WGGKPRIVRAFMDGTNCMTLVDKVGRANDLTIDYADQRLYWTDLDTNMIESSNMLGQERV
VIADDLPHPFGLTQYSDYIYWTDWNLHSIERADKTSGRNRTLIQGHLDFVMDILVFHSSR
QDGLNDCMHNNGQCGQLCLAIPSGHRCSCASHYTLDPSSRNCSPPTAFLLFSQKCAISRM
IPDDQRSPDLILPLHGLRNVKAIGYDPLDKFIYWVDGRQNIKRAKDDGTQPFVLTSPGQS
QNPDRQPHDLSIDVYSRTLFWTCEATNTINVHRLNGDAMGVVLRGDRDKPRAIVVNAERG
YLYFTNMQDRAAKIERAALDGTEREVLFTTGLIRPVALVVDNTLGKLFWVDADLKRIESC
DLSGANRLTLEDANIVQPVGLTVLGKHLYWIDRQQQMIERVDKTTGDARTRVQGRVAHLT
GIHAVEDISLEEFSAHPCARDNGGCSHICIAKGDGTPRCSCPAHLVLLQNLLTCGEPPTC
SPDQFACATGEIDCIPGAWRCDGFPECDDQSDEEGCPVCSAAQFPCARGQCVDLRLRCDG
EADCQDRSDEADCDASLNARPLLAAVCLPNQFRCASGQCVLIKQQCDSFPDCVDGSDELM
CEITKLPADDGPAHSSAIGPVIGIILSLFIMGGVYFVCQRVVCQRYAGASGPFPHEYVSG
TPHVPLNFIAPGGSQHGPFTGISCGKSMMSSVSLMGGRAGVPLYDRNHVTGASSSSSSST
KATLYPPILNPPPSPATDPSLYNVDVFYSSNIPAAARPYRPYIIRGVAPPTTPCSTDVCD
SDYSASRWKASKYYLDLNSDSDPYPPPPTPHSQYLSAEDSCPPSPATERSYFHLFPPPPS
PCTDSS
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgccgccccggtctcccgctcctcctcctccgccgccgctgctgctgctg
ctcgcgctctgctgcagcctggcccccgccgcggcctcgccgctcctcctgtttgccaac
cgccgggacgtgcggctggtggacgccggcggagtcaaggtggagtccaccatcgtggtc
agcggcctggaggacgcagccgccgtggatttccagttctccaagggagccgtgtattgg
acagacgtgagtgaggaggccatcaagcagacctacctgaaccagacgggcgccgctgtg
cagaacgtggtcatctccggcctggtgtcacccgatggcctggcctgcgactgggtcggc
aagaagctgtactggacagactcggagaccaaccgcatcgaggtggccaacctcaatggg
acgtcccggaaggtcctcttctggcaggaccttgaccagccgcgggccatcgccttggac
cccgcgcacgggtatatgtactggacagactggggagagacgcctcggatcgagcgggca
gggatggatggcagcacccggaagatcatcgtggactcggacatttactggcccaacggg
ctgaccattgacctggaggagcagaagctgtactgggccgacgccaagctcagcttcatc
caccgtgccaacctggacggctccttccggcagaaggtcgtggagggcagtctgacacac
ccctttgccctgacgctctctggagacaccctgtactggacggactggcagacccgctcc
atccacgcctgtaacaagaggactggagacaagaggaaggagatccttagcgctctctac
tcgcccatggatattcaagtgctcagcccagagcggcagccttattatcacacgcggtgt
gaggaggacaacggcggctgctcccatctgtgcctgctgtccccgagggagcccttctac
gcctgcgcctgccccacgggcgtgcagcttcaggacaacggccagacgtgcaaggcaggg
gcggaggaggtgctgctgctggcccggcggacggacctgcggaggatctcgctggacacg
ccggacttcacggacatcgtgctgcaggtggacgacatccggcacgccatcgccatcgac
tacgaccccctggagggctacgtctactggacggacgacgaggtgcgggccatccgcagg
gcgtacctggacgggtcgggggcgcagacgctggtcaacactgagatcaatgaccctgac
ggcatcgcggttgactgggtggcccgcaacctctactggaccgacaccggcaccgaccgc
atcgaggtgacgcgcctcaacggcacctcccgcaagatcctggtgtccgaggacctggac
gagccacgagccatcgtgctgcaccccgtgatgggcctcatgtactggacagactggggg
gaaaaccccaaaatcgagtgcgccaacctggacgggcaggaacggcacgttctggtcaat
acctccctgggctggcccaatggcctggcgctcgacctgcaggagggcaagctctactgg
ggagatgccaagacggacaaaatcgaggtgatcaatgtcgacgggacgaagcggcggacg
ctcctggaggacaagctcccgcacattttcgggttcacgctgctgggggacttcatctac
tggaccgactggcagcggcgtagcatcgagcgtgtgcacaaggtcaaggccagcagggac
gtcatcatcgaccagctgcctgacctgatggggctcaaggccgtgaatgtggccaaggtc
gtcggaaccaacccgtgtgcggacgggaacgggggctgcagtcatctgtgcttcttcacg
ccccgcgccaccaagtgcggctgtcccattggcctggagctgctcagcgacatgaagacc
tgcattgtgcccgaggccttcctggtgttcaccagccgggccgccatccaccggatctcc
ctggacaccaacaacaacgacgtggccatcccgctcacgggcgtcaaggaggcgtccgcc
ctggacttcgacgtgtccaacaatcacatctactggaccgacgtcagcctgaagaccatc
agccgggccttcatgaacgggagctccgtggagcacgtgattgagtttggccttgactac
ccggaaggcatggccgtcgactggatgggcaagaacctctactgggcagacaccgggacc
aacaggatcgaagtggcccggctggacgggcagttccggcaggtcctcgtgtggagggat
ctagacaacccacggtcgctggccctggaccccaccaaaggctacatctactggaccgag
tggggcggcaagcccaggatcgtgcgggctttcatggacgggaccaactgcatgacgctg
gtggacaaggtgggccgggccaacgaccttaccatcgactacgctgaccagcgtctctac
tggacggacctggacaccaacatgatcgagtcatccaacatgctgggtcaggagcgggtc
gtgatcgcggatgatctcccgcaccccttcggcctgacccagtacagtgattacatctac
tggacagactggaacctgcacagcatcgagcgggccgacaagaccagcggccggaaccgc
accctcatccagggccacctggacttcgtgatggatatcctggtgttccactcctcccgc
caggacggcctcaacgactgcatgcacaacaacgggcagtgtggccagctgtgcctggcc
atccccagcggccaccgctgcagctgcgcctcgcattataccctggaccccagcagccgc
aactgcagcccgcccaccgccttcctgctgttcagccagaagtgcgccatcagcaggatg
atccctgacgaccagcgcagcccagacctcatcctgccgctgcacggcctgcgcaatgtc
aaggccatcggctacgacccgctggacaagttcatctactgggtggacgggcgccagaac
atcaaacgagccaaggacgacgggacccagcccttcgttctgacctctccgggccaaagc
cagaacccagacaggcagccgcacgacctcagcatcgacgtctacagccggacgctgttc
tggacgtgtgaggccaccaacaccatcaacgtccaccggctcaacggggacgccatgggc
gtggtgctgcggggggaccgcgacaagccgagggccatcgtcgtcaacgccgagcgcggg
tacctatacttcaccaacatgcaggaccgcgccgccaagatcgaacgcgccgccctggac
ggcacggagcgcgaggtcctcttcaccacgggcctcatccgccccgtggccctcgtggtg
gacaacacgctgggcaagctcttctgggtggacgccgacctgaagcgcattgagagctgt
gacttgtcaggggccaaccgcctgaccctggaggacgccaacatcgtgcagcctgtgggc
ctgactgtgctgggcaaacacctctactggattgaccggcagcagcagatgatcgagcgt
gtggacaagaccacgggggacgcacggacacgagtccagggccgcgtcgcccacctgacc
ggcattcatgctgtggaggacatcagcctggaggagttctcagcccacccttgcgcccgc
gacaacggaggctgttctcacatctgcatcgccaagggcgatgggacgccacgatgctcg
tgcccagcccacctcgtgctcctgcagaacctgctgacttgtggtgagcctcccacgtgc
tcccccgaccagttcgcctgtgctactggggagatcgactgcatccccggggcctggcgc
tgtgacggcttccccgagtgtgacgaccagagcgatgaggagggctgcccagtgtgctcg
gccgcgcagttcccctgtgcgcggggccagtgcgtggacctgcggctgcgctgtgatggc
gaggcggactgccaggaccgctcggatgaggcggactgcgacgcctctctgaacgcaagg
cccctccttgcagccgtctgcctgcccaaccagttccgctgtgccagtggccagtgcgtc
ctcatcaaacagcaatgcgattcctttccggactgcgtggatggctccgacgagctcatg
tgcgaaatcaccaagctgcccgcggacgacggcccggcccacagcagcgccatcgggccg
gtcatcggcatcatcctgtcgctcttcatcatgggcggggtctacttcgtgtgccagcgc
gtggtatgccagcgctacgccggcgctagcgggcccttcccgcacgagtacgtcagcggg
accccccacgtgcccctcaacttcatcgcccccggcggctcccagcacggtcccttcacc
ggcatttcgtgcggcaagtccatgatgagctccgtgagcctgatgggcggccgggccggg
gtgcccctctacgaccggaaccacgtcaccggggcctcgtccagcagctcgtccagcacc
aaggctacactgtacccgccgatcttgaacccgccgccgtcccccgccacggacccctcc
ctgtacaacgtggacgtgttctactcttccaacattcccgccgccgccaggccgtacagg
ccctacatcatccgaggcgtggcgcccccgaccacgccctgcagcacggacgtgtgcgac
agtgattatagcgccagccgctggaaggccagcaagtactacctggatctgaactcggac
tcagacccctacccgcctccgcccacaccccacagccagtacctgtcggcggaggacagc
tgcccgccgtcgcccgccacggagagaagctacttccacctcttcccgcccccgccgtcc
ccctgcacggactcctcctga
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