Cervus canadensis (wapiti): 122430620
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Entry
122430620 CDS
T07554
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03022
Basal transcription factors
ccad03420
Nucleotide excision repair
ccad05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122430620 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
122430620 (GTF2H1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
122430620 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccad03021
]
122430620 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
ccad03400
]
122430620 (GTF2H1)
Transcription machinery [BR:
ccad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122430620 (GTF2H1)
DNA repair and recombination proteins [BR:
ccad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122430620 (GTF2H1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
122430620
NCBI-ProteinID:
XP_043307283
LinkDB
All DBs
Position
29:complement(24359196..24391234)
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLNVNAAESSSTSNHKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSTSNSKSIRENSN
AAIIKRFNHHSAMVLAAGLRKQEAQKEQNGEPSSIDGNSGDVDCFQPAIKRAKLQESIEY
EDLGKNNSIKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIREEMEAYTPRLTQ
VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ
SRRLMKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcatctgaagaagttctgttgattgtaaagaaggtgcgacagaagaagcag
gatggagctctgtacctcatggcagaaagaattgcttgggcacctgaaggcaaagataga
tttaccatcagccatatgtatgcagatatcaaatgccagaaaatcagtccagaaggaaaa
gcgaaaattcagcttcagctggtcctgcatgcaggggacacaactaacttccatttttcc
aatgaaagcacagcagtgaaagagcgagatgcagtgaaagaccttcttcagcaactgctt
cccaaattcaagaggaaagcaaataaagaactggaagagaaaaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagaccttgttgtgagtcaagtcatcagtgccgag
gaattctgggccaaccgtttaaatgtgaacgcagcagagagttcttccacatctaatcat
aagcaggatgttggcatttctgcagcatttctggctgatgtccgaccccagacagatgga
tgtaatggtttgagatacaatttaacatctgatatcattgagtccatttttaggacctat
ccagcagtaaaaatgaaatatgcagaaaatgttccccacaacatgacagaaaaggaattc
tggacacgtttctttcagtcccattatttccacagggaccggctgaatacagggtcaaag
gacctctttgcagaatgtgccaaaatagatgagaaagggttaaaaacaatggtttcatta
ggagtgaaaaacccgctacttgacttaacagctttggaagataaaccattagatgagggc
tatggcatttcctccgtgccatctacttctaattctaaatccatcagagagaatagtaat
gctgccatcatcaagagatttaaccatcacagtgccatggtcctggcagcaggtctcagg
aaacaagaagcacaaaaggagcaaaatggtgagcccagcagcattgatggaaattccgga
gatgtagattgctttcagccagcaatcaaaagggcgaagttacaagaatccattgaatat
gaagacttgggaaaaaataattccataaaaacaattgcactaaacctcaagaagtcagat
aggtattatcatggtccaactccaatccagtcgctgcagtatgcaacaagtcaggacatt
attaattcttttcaaagtattagagaagaaatggaagcttatacacccagattaactcag
gttctctccagtagtgctgccagtagcaccatcacagccctgtcccctggaggagcactg
atgcagggagggacgcagcaagccataaaccagatggtgccaaatgatattcagtctgaa
ttaaaacacctatatgtggctgttggggaacttctgcggcacttctggtcctgttttcct
gttaatacgccattcctagaagaaaaggtagtgaaaatgaaaagtaatttggaacgattc
caagttacaaagctctgcccattccaagaaaaaattcggagacagtatttaagcacaaat
ttggttagtcacatagaggagatgctccagacagcctacaacaagctccacacgtggcag
tcacggcgtctgatgaagaaaacgtga
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