Cervus canadensis (wapiti): 122430797
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Entry
122430797 CDS
T07554
Symbol
SF1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122430797 (SF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccad03041
]
122430797 (SF1)
Spliceosome [BR:
ccad03041
]
Complex A
Other components
Complex A specific factors
122430797 (SF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
zf-CCHC_3
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
122430797
NCBI-ProteinID:
XP_043307586
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All DBs
Position
29:complement(40463638..40477570)
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AA seq
764 aa
AA seq
DB search
MATGANATPLGKLGPPGLPPLPGPKGGFEPGLPTAPGPGAGLLVSGPLPPPPVGSVGALT
AAFPFAALPPPPPPPPPPPPPQQPPPPPPPSSGSSYSPPQPPPPPPLYQRVSPPQPPPPQ
PPRQDQQPGPAGGGGDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQ
LQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITE
MVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKI
MIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPED
QNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQ
RPGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPP
PSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQH
NPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM
GMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTS
AGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGM
MYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaggagcgaacgctacgccgctgggtaagctgggccccccaggcctccctccc
ctccctggccccaaagggggcttcgagccgggactaccgactgcccccgggcctggggcg
gggctgctggtgtccgggccgctgccgcccccgcccgtgggctcggtgggggccctgacc
gcggccttcccctttgcggcgctacctccgccgccgccgccgccgccgccccccccgcct
ccccagcagccgccgccgccaccgcccccctcctcgggctcctcgtactcgccgccgcag
ccgccccctccgccgccgctctaccagcgcgtgtcgccaccacagccaccgccaccccag
ccgccgcgtcaggaccagcagccgggcccggccggcggcggaggagacttccccagtaag
aagcggaagaggagccgctggaaccaagacacaatggaacagaagacggtgattccagga
atgcctacagtcatcccccctggacttactcgggaacaagaaagagcttatatagtgcaa
ctgcagatagaagacctgactcgtaaactgcgcacaggagacctgggcatcccccctaac
cctgaggacaggtccccttcccctgagcccatctacaatagtgaggggaagaggcttaac
actcgcgagttccgtacccgcaagaaacttgaggaggaacggcacaatctcatcacggaa
atggttgccctcaaccctgatttcaagccacctgcagattacaaacctccagcaacacgt
gtgagcgataaagtaatgatcccacaagatgagtatccagaaatcaattttgtggggttg
ctgattgggccaagagggaacaccttgaaaaacatagagaaggagtgtaatgccaagatc
atgatccgggggaagggttctgtgaaagaaggaaaagttgggcgcaaagatggccagatg
ctgccaggagaagatgagccgcttcacgccctggtcactgccaataccatggagaatgtg
aagaaagccgtagaacagataagaaacatcctgaagcagggtatcgagacccctgaggac
cagaacgacctacggaagatgcagcttcgagagttggctcgcttgaatggaacccttcgg
gaagatgataacaggatcttaagaccctggcagagctctgagacccgcagcattaccaat
accacagtgtgtaccaagtgtggaggggctggccacattgcttccgattgcaagttccaa
aggcctggtgacccccagtcagctcaggataaagcacggatggataaagagtacttgtcc
ctcatggctgaactgggggaggcgcctgtgcccgcatctgtgggctccacctctgggcct
gccaccacaccactggccagtgcccctcggcctgctgctcccgccaacaacccacctcca
ccgtctctcatgtccactacccagagccgcccaccctggatgaattctgggccgtcagag
agtcggccctaccatggcatgcacggaggtggccctggtgggcccggaggtggcccccac
agcttcccacacccgctgcccagcctcacaggtgggcatggtggacatcccatgcagcac
aaccctaatggacccccgcccccctggatgcagccgccaccaccaccgatgaaccagggc
ccccacccacctgggcaccatggccctcctccaatggatcagtacctgggaagtacgcct
gtgggctctggggtctatcgcctgcatcaaggaaaaggtatgatgccgccgccgcctatg
ggcatgatgccgccgccgccgccgcctcccagtgggcagcctccgccccctccctctggt
cctcttcccccatggcaacagcagcagcagcagcctccgccaccccctccgcccagcagc
agtatggcttccagtacccccttgccatggcagcaaaatacgacgactaccaccacgagc
gctggcacagggtccatcccgccatggcaacagcagcaggcggctgccgcagcttctcca
ggagcccctcagatgcaaggcaaccccactatggtgcccctgcccccaggggtccagccg
cctctgccgcccggggcccctccccctccgccgcctccgccgcctggttccgccggcatg
atgtatgccccgccccctcctcctccgcctcccatggacccttctaactttgtcaccatg
atgggcatgggggtggcgggcatgccacccttcgggatgcctccagctcccccaccgcct
ccaccacagaactag
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