Cervus canadensis (wapiti): 122430875
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Entry
122430875 CDS
T07554
Symbol
NFRKB
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122430875 (NFRKB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccad03036
]
122430875 (NFRKB)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
122430875 (NFRKB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
122430875
NCBI-ProteinID:
XP_043307732
LinkDB
All DBs
Position
29:complement(33850618..33881411)
Genome browser
AA seq
1298 aa
AA seq
DB search
MDSLDHMLTDPLELGPCGDGHGSRIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWQE
VLSDSQREHLQQFLPHFPEDSMEQQNQLILALFSGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFRSQYKRYLSSQQQYFHRLLKQILASRSDLLEMARRSGPAFPCRQKRPWPSRA
PEEREWRTQQRYLKVLREVKEECGDTALSSDEEDLSSWLPSSPARSPSPAVPLRVVPTLS
TTDMKTADKIELGDSDLKIMLKKHHEKRKYQPDHPDLLTGDLTLNDIMTRVNAGRKGSLA
ALYDLAVLKKKVKEKEERKKKKIKLIKSEVEDLAESLSGPEGLPPLSQAPSPLAIPAIKE
EPLEDLKPCLGINEISSSFFSLLLEILLLEGQASLPLLEERVLDWQSSPASSLNSWFSAA
PNWAELVLPALQYLAGESRAVPSSFSPFVEFKEKTQQWKLLGQSQDNEKELAALFQLWLE
TKDQAFCKQETEDSSDATTPVPRVRTDYVVRPSTGEEKRVFQEQERYRYSQPHKAFTFRM
HGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEI
CELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEEFE
RIHQAQAAAAKARKALQQKPKPPSKVKSSSKEGPVKVLSGGPSEQSQLSLSDSSMPPTPV
TPVTPTTPALPATPISPPPVPPVNKSGPTTVSEPAKSTSGVLLVSSPTMPQLGTMLSPAS
SQTPPSSQAAARVVSHSGSAGLPQVRVVAPPSLPSVTQPAGPAPALPPMPTGTQIRMPAP
GAQAKGGPQTVLATVPVKAQTATATVQRPGPGSAGLTVTSLSAAANPASKPATSSPGGSA
PSTPTAAVLQNVAGQNIIKQVAITGQLGVKPQTGSSVPLTATNFRIQGKDVLRLPPSSIT
TDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGTGAGATGKGISATLHVTSNPVHATD
SPAKAGVAAAPSSTPTGTTVVKVTPDLKPAEASSSAFRLMPALGVSVADQKGKNTVASSE
AKPAATIRIVQGLGVMPPKAGQTITVAAHTKQGPSVAGGSGTVHTSAVSLPSVNAAVSKT
VAVASGAASAPISIGTGAPAVRQVPVSSAVVSTSQAGKLPTRITVPLSVISQPMKGKSVV
TAPIIKGNLGANLGGLGRNIILTTMPAGAKLIAGNKPVSFLTAQQLQQLQQQGQATQVRI
QTVPASHLQQGTASGSSKAVSTVVVTTAPSPKQAPEQQ
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggattccttggaccatatgctgacggatcccttggaactgggcccgtgtggggatggc
cacggctcacggatcatggaggactgcctcctggggggcaccagggttagtctgcctgag
gaccttctggaggaccctgagatcttcttcgatgtagtcagcctctcaacgtggcaggaa
gtgctgagcgactcgcagcgtgaacatctccagcagtttctgccccactttcctgaagac
agcatggagcagcagaatcagctcatcctcgccctgttcagtggcgagaacttccgcttt
gggaaccctctgcacatcgcccagaagcttttccgagacggacacttcaaccccgaggtg
gtcaagtaccggcagctgtgcttccggtcgcagtacaagcgctacctcagctcccagcag
cagtacttccaccggctgctgaagcagatcctggcctcgcgcagtgacctgctggagatg
gcccggcggagcggccccgccttcccatgccggcagaagcggccctggccgtcgcgcgca
cccgaggagcgggagtggcgcacccagcagcgctacctgaaggtcctgcgggaggtgaag
gaggagtgtggggacacggcgctgtcctccgacgaggaggatctcagctcgtggcttcca
agctccccagcacgctccccgagccctgctgttcctctcagggtggtgcccacgctctcc
accacggacatgaaaaccgcagataaaatagagctgggggacagcgacctgaagatcatg
ttaaagaagcaccacgagaagcggaaataccaaccagatcatccggacctgttgacaggg
gacttgactctgaatgacatcatgactcgagtgaacgccggcaggaagggctcgctagca
gccctatatgacttggctgtccttaaaaaaaaggttaaagaaaaagaggaaaggaagaag
aagaaaataaaattgatcaagtcagaggtagaggacctggccgaatccctgagcggtccc
gaagggctcccacccctctcgcaggctccatcccctctggccatacctgccatcaaggaa
gagcctctcgaagatctcaagccttgccttggaatcaatgaaatatcttccagcttcttc
tccctcctgctggagatcctgctgctggagggacaggctagccttcctttgctagaagag
cgggttttggattggcagtcctctccagccagctccctcaatagctggttctccgcggcc
cccaactgggcagagttggtattaccagccctgcagtatcttgctggagaaagccgtgct
gtgccatccagcttctctccgtttgttgaattcaaggagaaaacccagcagtggaaactg
ctcggccagtcccaagataatgaaaaggagttagctgcactcttccagctgtggctggaa
accaaagaccaggccttctgtaagcaagaaactgaagacagctcagatgccacaacgcct
gttcctcgggtaaggactgactatgtggtgcggcccagcacgggggaggagaagcgagtt
tttcaggagcaggagcgctaccggtacagccagccccacaaagcctttaccttccgcatg
cacggcttcgagtccgtggtggggcccgttaagggtgtgttcgacaaggagacctcgctc
aacaaggcacgggagcactccctgctgcgctctgaccggcccgcctacgtcaccatcctg
tccctggttcgtgatgcggcagcacggctgcccaacggggagggcacgcgggcggagatc
tgtgagctgctcaaggactcccagttcctggcacccgacgtcaccagcacgcaggtgaac
acagtggtgagcggcgccctggaccggctgcattatgagaaggacccatgcgtgaagtat
gacatcgggcggaagctgtggatctacttgcatcgggaccgcagcgaggaggagtttgag
cggatccaccaagcccaagcagctgcagccaaagccaggaaagccctccagcagaagccc
aagcctccgtccaaggtgaagtccagcagcaaggagggtccggtgaaggtcctgagcggc
ggcccgtccgagcagagccagctgagcctcagcgactccagcatgcccccgaccccggtc
acgcccgtgacgcccaccacgcctgctctacctgccacgccgatctccccaccgccagtg
ccgccagtgaacaagagtggccccacgacagtctcagaaccggccaagtctacgtcaggt
gttcttctcgtgtcctcaccaaccatgccgcagctgggaaccatgctgtccccagcatcc
agccagaccccgccgagctctcaggctgctgcccgtgtcgtgagccactcgggctcggct
gggctcccccaggtgcgggtggtggccccacccagccttccctccgtgacgcagccagcg
gggccagccccggcacttccaccgatgcctacgggaacgcagatccgcatgccggcccct
ggcgcacaggccaaaggcgggccccagacagtcctggccaccgttccggtcaaagcgcag
acagcgacggccaccgtgcagcggccgggacccgggtcggcggggctcacggtgacaagt
ctctctgcagcggccaatcctgcgagcaagcccgccaccagctctcctgggggctctgct
cccagcacccccacggcggccgttcttcagaacgtcgcaggacagaacattatcaagcag
gtggcgatcactgggcagcttggcgtgaagccccagacgggcagcagtgtccccctcaca
gccaccaacttccggatccagggcaaggatgtgctgcgtctcccgccctcctccatcacc
acggacgccaagggccagacggtgctgcgcatcaccccagacatgatggccacgctggcc
aagtcccaggtcaccacagtcaaactgacccaggacctctttgggacaggcgccggcgcc
acgggcaaaggcatctcggcgaccctccacgtcacatccaaccccgttcatgccactgac
agccctgccaaggccggtgtggctgctgccccgtcatccactccgacagggaccactgtg
gtcaaagtgactcctgatctcaagccggcggaagcctcgagttcagcttttcgcttgatg
ccagcgcttggcgtgagcgtggccgaccagaaggggaaaaacacagtggcctcatcggaa
gcgaaaccagctgccaccattcgcatcgtgcagggcctgggggtgatgccccccaaagca
ggccagaccatcacggtcgcagcccacaccaagcaggggccctcagtggccggtgggtct
ggaactgttcatacgtcggccgtgtccttgcccagcgtgaacgctgccgtgtccaagacc
gtggctgtggcttctggggcggccagcgcccccatcagcatcgggaccggagcgcctgcc
gtgcggcaggtcccagtcagctccgcggtcgtctccacttcgcaggccgggaagctgcct
acacggatcacagttccgctgtctgtcatcagccagcccatgaagggcaagagtgtggtc
acagcccccatcatcaaaggcaacctgggggccaacctcggtgggttgggccgcaacatc
atccttactaccatgccggcgggtgcgaagctcatcgcgggcaacaagccggtcagcttc
ctcacggcccagcagctgcagcagctccagcagcagggtcaggccacgcaggtgcgcatc
cagacagtccccgcatcccacctccagcagggaacagcctccggttcctccaaggccgtc
tccactgtcgtcgtgaccacggccccatctcctaagcaggcgcctgagcagcagtga
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