Cervus canadensis (wapiti): 122430944
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Entry
122430944 CDS
T07554
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04141
Protein processing in endoplasmic reticulum
ccad04210
Apoptosis
ccad04217
Necroptosis
ccad04218
Cellular senescence
ccad04382
Cornified envelope formation
ccad05010
Alzheimer disease
ccad05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122430944 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
122430944 (CAPN1)
04217 Necroptosis
122430944 (CAPN1)
04218 Cellular senescence
122430944 (CAPN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122430944 (CAPN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
122430944 (CAPN1)
05022 Pathways of neurodegeneration - multiple diseases
122430944 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccad01002
]
122430944 (CAPN1)
Enzymes [BR:
ccad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
122430944 (CAPN1)
Peptidases and inhibitors [BR:
ccad01002
]
Cysteine peptidases
Family C2: calpain family
122430944 (CAPN1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
122430944
NCBI-ProteinID:
XP_043307849
LinkDB
All DBs
Position
29:40855634..40882676
Genome browser
AA seq
818 aa
AA seq
DB search
MGKLRPRGAGTHPRSRSQPGSGTPIPRAPPGCREPLKRGGDAASLRPGARGRGRGGGGEP
AQPGSPAAARTRRGGAAVCRASGRGLPAAGPAPPPSSCRSPRMAEEFITPVYCTGVSAQV
QKQRAKGLGLGRHENAIKYLGQDYEQLRVHCLQSGALFRDEAFPPVPQSLGFKELGPNSS
KTYGIKWKRPTELFSNPQFIVDGATRTDICQGALGDCWLLAAIASLTLNDTLLHRVVPHG
QSFQDGYAGIFHFQLWQFGEWVDVVVDDLLPTKDGKLVFVHSAQGNEFWSALLEKAYAKV
NGSYEALSGGSTSEGFEDFTGGVTEWYELRKAPSDLYNIILKALERGSLLGCSIDISSIL
DMEAVTFKKLVKGHAYSVTGAKQVNYQGQMVNLIRMRNPWGEVEWTGAWSDGSSEWNGVD
PYVREQLRIKMEDGEFWMSFRDFMREFTRLEICNLTPDALKSQRFRNWNTTLYEGTWRRG
STAGGCRNYPATFWVNPQFKIRLEETDDPDHDDYGGRESGCSFLLALMQKHRRRERRFGR
DMETIGFAVYEVPPELVGQPAVHLKRDFFLANASRARSEQFINLREVSTRFRLPPGEYVV
VPSTFEPNKEGDFVLRFFSEKCAGTQELDDQVQANLPDEQVLSEEEIDENFKSLFRQLAG
EDMEISVKELRTILNRIISKHKDLRTTGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNR
IRNYLSIFRKFDLDKSGSMSAYEMRMAIEFAGFKLNKKLYELIITRYSEPDLAVDFDNFV
CCLVRLETMFRFFKTLDTDLDGVVTFDLFKWLQLTMFA
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggggaaactaaggccgagaggggcagggactcatccaaggtcacgcagccagcccggg
tccgggacaccgattccccgagccccgcctggatgccgcgagccgctaaaacggggtggc
gacgctgcgagcctgcgccccggggcgcgggggcgggggcggggtgggggcggggaaccg
gcccagcccgggagcccggctgcagcgaggacccggcggggtggggctgccgtttgcaga
gcgtccggcaggggtctgcccgccgccggcccggcccctcctccgagcagctgccgcagc
ccgaggatggccgaggagttcatcactccggtgtactgcactggggtgtctgcacaagtg
cagaagcagcgggccaaggggctgggcctgggccgccatgaaaatgccatcaagtacctg
ggccaggattacgagcagctgcgggttcactgcctgcaaagcggggccctcttccgtgac
gaggctttccccccagtgccccagagcctgggtttcaaggagctgggccccaactcctcc
aaaacctatggcatcaagtggaagcgtcccacggagctgttctcaaacccccagttcatc
gtggatggagccacccgcacggacatctgccagggcgcgctgggggactgttggctcctg
gctgccatcgcctcccttaccctcaatgacaccctcctgcaccgagtagttccacatggc
caaagcttccaggatggctacgctggcatcttccatttccagctgtggcagtttggtgag
tgggtggacgtggtggtggatgacctgctgcccaccaaggatgggaagctggtgttcgtg
cactctgcccaaggcaatgaattctggagcgccctgctggagaaggcctacgccaaggtg
aatggcagctacgaggccctctcaggaggcagtacctctgagggctttgaggacttcacc
ggcggagtcaccgagtggtatgagctgcggaaggcacccagcgacctctacaacatcatc
ctcaaggccctggagcgtggctccctgctgggctgctccatcgatatctccagcattctg
gacatggaggctgtcaccttcaagaagctggtgaagggccacgcctactctgtgactggg
gccaagcaggtgaactaccagggccagatggtgaacctgatccggatgcggaacccctgg
ggcgaggtggagtggacgggagcctggagtgacggctcctcggagtggaatggcgtggac
ccttacgtgcgggagcagctccggatcaagatggaggatggggagttctggatgtcattc
cgagacttcatgcgtgaattcacccgcctggagatctgcaacctgacgcccgacgcgctc
aagagccagaggttccgcaactggaacaccaccttgtacgagggcacctggcggcggggg
agcaccgcggggggctgccgcaactacccagccactttctgggtgaacccccaattcaag
atccggctggaggagacggatgacccggaccacgacgactacgggggtcgcgagtcaggc
tgcagcttcctgctcgccctcatgcagaagcaccgccgtcgggagcgccggttcggccgt
gacatggagaccataggcttcgccgtctacgaggtccctccagagctggtgggccagccg
gccgtgcacctgaagcgagacttcttcctggccaatgcatcccgggcccggtccgagcag
ttcatcaacctgcgggaggtcagcacccgcttccgcctgccgccaggggagtacgtggtg
gtgccctccaccttcgagcccaacaaggagggcgactttgtgctgcgtttcttctcagag
aagtgcgcggggacccaagagctggatgaccaggtccaggccaatctccccgacgagcaa
gtgctctcagaagaggagattgatgagaacttcaagtccctcttcagacaactggcaggg
gaggacatggagatcagtgtcaaggagctgcggaccatcctcaacaggatcatcagcaaa
cacaaagacctgaggaccacgggcttcagcctggagtcctgccgcagcatggtcaacctc
atggatcgcgacggcaatggcaaattgggcctggtggagttcaacatcctatggaaccgg
atccggaattacctgtccatcttccggaagtttgacctggacaagtctggcagcatgagt
gcctatgagatgcggatggccattgagtttgcaggcttcaagctcaacaagaagctctac
gagctcatcatcacccgctactcggagcccgacctggccgtggacttcgacaacttcgtg
tgctgcctggtgcggctggagaccatgttccggtttttcaaaactctggacaccgatctg
gatggagtggtgacctttgacttgtttaagtggttacagctgaccatgtttgcatga
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