Cervus canadensis (wapiti): 122431044
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Entry
122431044 CDS
T07554
Symbol
SHANK2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
122431044 (SHANK2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
SAM_2
Ank_3
Ank_4
Ank_5
SH3_2
SH3_9
PDZ_6
PDZ
FERM_f0
SH3_1
SAM_4
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
122431044
NCBI-ProteinID:
XP_043308022
LinkDB
All DBs
Position
29:46762026..47322120
Genome browser
AA seq
1844 aa
AA seq
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MPRSPTSSEDEMARSYSGSSEESNSDSSKEETIYDTIRATAQKPGGARAEEGQAHTLVLR
IVIEDLQQTKCIRFNPDATVWVAKQRILCSLNQSLKDVLNYGLFQPASDGRDGKFLDEER
LLREYPQPTGKGIPSLEFRYKKRVYRQTNLDEKQLAKLHTKTNLKKCMDHIQHRSVEKIV
KMLDRGLDPNFHDLETGETPLTLAAQLDDPVEMIKALRNGGAHLDFRAKDGMTALHKAAR
TRNLLALKTLLELGASPDYKDSYGLTPLYHTAVVGGDPCCCELLLHEHAAVSCKDENGWH
EIHQACRYGHVQHLEHLLFYGADMGAQNASGNTALHVCALYNQDSCARVLLFRGGDKELK
NYNSQTPFQVAIIAGNFELAEYIKNHKETDIVPFREAPAYSNRRRRPPSTLAAPRLLLRS
NSDNNLNAGAPDWAVCAAASHLSLSPQLLQQTPSKADGAAKTLGSYTPGPRSRSPSLNRL
GGAGEDAKRPRQPWHVGPAFPPGANKDTLSAFEYPGPRRKLYSAVPGRLFVVIKPYQPQV
DGEIPLHRGDRVKVLSIGEGGFWEGSSRGHIGWFPAECVEEVHCKPRDSQAETRADRSKK
LFRHYTVGSYDSFDASSDCVIEEKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFPA
LQYLESVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVTMIRQGGNHLVLKVVTVTR
SLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELASVRKKKDKPEEIVPASKPSRA
AESVALESRVATIKQRPTSRCFPSVSDVNSVYERQGIAVMTPTVPGSPKGPFLGLPRGTM
RRQKSIDSRIFLSGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQSVPPSPPPPSPT
AYNCPKSPTPRVYGTIKPAFNQNPAAKVSPAARSDTVATMVREKGLYHRREVDRYSLDSE
DLYSRGAGPQANFRGKRGQMPENPYSEVGKIASKAVYVPAKPARRKGMLVKQSNVEDSPE
KTCSIPIPTIIVKEPSTSSSGKSSQGSSVETDPQAPEQPGQLRPDDSLTVSSPFAAAIAG
AVRDREKRLEARRNSPAFLSTDLGDEDVGLGPPAPRAHPSKFPEEGGFGEEDGGEPLSSP
APREPENHFVGAGEAGAQGEAGRLPNAPGQAKAPEGSPVAPPRSGSAAGPENYVHPLTGR
LLDPSSPLALALSARDRALKESQQGPKGEAPKADLNKPLYIDTKMRPSGEAGFPPVGRQS
GRGPLRRQETENKYETDPGKDRRDDKKGVLVNIVDASQQKSAGLLMVHTVDAARPEDFLQ
EEDEKADPETQPDHPPSEAPEGAPETEGAFPTPAGPEPTAATAAAPGRTIVAAGSVEEAV
ILPFRIPPPPLASVDLDEDFIFTEPLPPPLEFANSFDIPDDRVASVPALSDLVKQKKNDT
SQSPSLNSSQPTNSADSKKPASLSNCLPTSFLPPPESFDAVTDSGIEEVDSRSSSDHHLE
TTSTISTVSSISTLSSEGGENADTCTVYADGQAFMVDKPPVPPKPKMKPIIHKGNTLYHD
ALLEEDVDSFVIPPPAPPPPPGGAQPGPTKAIQPRTSRLWGDVSEVKSPILSGPKANVIS
ELNSILQQMNREKSAKPGEGLDLTPGTKPAGLAPRGPEVMSTVSGTRSTTVTFTVRPGTS
QPITLQSRPPDYESRNSGPRRAPSPVVSPTELSKEVLPNPLPTATAAPSPTLSDVFSLPS
QPPPGDLFGLNPAGRSRSPSPSILQQPISNKPFTTKPVHLWTKPDVADWLESLNLGEHKE
AFMDNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcagccccacgtccagcgaggacgagatggcccggagctactcaggctcctcg
gaggagtcgaactcagacagttccaaggaggagaccatctacgacaccatccgggccaca
gcccagaagccgggcggcgccagggcagaggagggccaggcccacacgctggtgctgcgc
attgtcatcgaggatctgcagcaaacgaagtgcattcgattcaacccggatgctacggtg
tgggtcgcaaagcagcggattctgtgctcactgaaccagagcctgaaggacgtcctgaac
tacgggctgttccagccggccagtgacgggcgcgacggcaagttcctggacgaggagcgg
ctgttgcgcgagtacccgcagcccacgggcaagggcatcccgtccctggagtttcgctac
aagaagcgggtgtatagacagaccaacctggacgagaaacagctggccaagctgcacacg
aagaccaatttgaaaaaatgcatggatcacatccagcatcggtcagtggagaaaatcgtc
aagatgctggaccgaggcctggatccgaatttccacgacctggagaccggagagactccc
ctgaccttggctgctcagctggacgaccccgtggagatgatcaaggccctccggaacggc
ggggcccacctggacttccgcgccaaggatggcatgacagccctgcacaaagccgcccgc
accaggaacctgctggccctgaagaccctcttggagcttggcgcgtccccggattacaag
gacagctacggcctgaccccgctgtatcacacggcggtggtcgggggcgacccctgctgc
tgtgagctgctgctccacgagcacgcggccgtgagctgcaaggacgagaacggctggcac
gagatccaccaggcctgcaggtacggccacgtgcagcatctggagcacctgctcttctac
ggggccgacatgggggcccagaatgcctcggggaacaccgccctgcacgtctgcgccctc
tacaaccaggacagctgtgcgcgcgtgcttctgtttcgaggtggagataaagaactgaag
aactacaacagccagaccccgttccaggtggcgatcattgccggcaacttcgagctggcc
gagtacatcaagaaccacaaggagaccgacatcgtgcccttccgagaggccccggcgtac
tccaaccgcaggcggcggccccccagcacgctggccgccccccggctcctgctgcgatcc
aacagtgacaacaacctcaacgccggcgcgcccgactgggctgtctgtgcggccgcctcc
cacctcagcctctcgccccagctgctgcagcagacgcccagcaaggccgacggggctgcc
aagaccctcgggagctacacccccgggccccgcagccggtccccctcgctcaacaggctg
ggcggagccggcgaggatgccaagaggccccggcagccctggcacgtcggcccagctttc
ccaccaggagccaacaaggacacgctgtctgccttcgagtacccggggcccagaaggaag
ctgtacagtgcggtgcctgggaggctcttcgttgtcatcaagccataccaaccccaggtc
gatggcgagatccccctgcaccgtggcgacagggtcaaagtgctgagcatcggcgaaggt
ggcttctgggaaggcagctcccgcggccacatcggatggttccccgctgagtgtgtggag
gaggtccactgcaagccccgggacagccaggcagaaactcgtgcagaccgcagcaagaag
ctcttccggcactacacagtcggctcctacgacagcttcgatgcctccagcgactgcgtt
atcgaggagaagaccgtggtcctgcagaagaaagacaatgagggcttcggattcgtgctc
cgaggggcgaaagcggatacgcccatcgaagaattcacgcccacaccggccttcccggcc
ctgcagtacctggaatctgtggatgaaggcggggtggcgtggcaagccggactgaggacc
ggggacttcttgattgaggtgaacaacgagaacgtcgtcaaggtcggccaccggcaggtg
gtgaccatgatccgccagggcgggaaccacttggtcctcaaggtggtcacggtcaccagg
agtctggacccggatgacaccgcccggaagaaagctcctccgcctccgaagcgcgctccg
accacggccctcacccttcgatccaagtccatgacctcggagctggaggagctcgcctcc
gtccggaagaagaaggataaacccgaggagatcgtcccggcctccaagccatcccgggcc
gctgagagcgtggcgctggagtccagggtggccaccatcaagcagcggcccaccagccgg
tgcttcccctccgtctcggacgtgaactccgtgtacgaacgccagggcatcgccgtgatg
acgcccaccgtccccgggagcccgaagggcccgttcctgggcctccctcgaggtacgatg
cgaaggcagaagtcaatagacagcagaatctttctatcagggataacggaggaggagcgt
cagtttctggccccgcccatgctcaagttcaccagaagcctgtccatgccggacacctcc
gaggacatcccgcctccgccgcagtcggtgcccccgtcgccgccgccaccctcccccacc
gcctacaactgccccaagtccccgactccgcgagtctacgggacgatcaagcccgccttc
aaccagaaccccgccgccaaggtgtccccggccgcccgctccgacacggtggccaccatg
gtgcgggagaaggggctctaccaccggcgggaggtcgaccgctactcactggactccgag
gacctctacagtcgcggcgccgggccccaggccaacttccgcggcaagaggggccagatg
cccgagaacccgtactccgaggtggggaagatcgccagcaaagccgtgtacgtgccggcc
aagcccgcccggcggaagggtatgctggtgaagcagtccaacgtggaggacagccccgag
aagacgtgctccatccccatccccaccatcatcgtcaaggagccctccaccagcagcagc
ggcaagagcagccaaggcagcagcgtggagaccgacccgcaggccccggagcagcccggc
cagctgcggccggacgacagtctgaccgtcagcagccccttcgccgccgccatcgccggg
gccgtccgcgaccgcgagaagcggctggaggcccggaggaactccccggccttcctgtcc
acggacctgggggacgaggacgtgggcctcgggccgcccgccccccgggcgcacccctcc
aagttccccgaggagggcggcttcggcgaggaggacggcggggagccgctgtcgtcaccg
gcgccccgggagcccgagaaccactttgtgggtgcgggtgaggccggagctcagggtgag
gctggcaggctgccgaacgccccgggccaggccaaggcgccggagggcagccccgtggcg
cccccccggagcggcagcgcggcgggccctgagaactacgtgcaccctctcaccgggcgg
ctgctggaccccagctccccgctggctctggcgctgtcagcgagggaccgggccctgaag
gagtcccagcagggccccaaaggggaggcccccaaggccgacctcaacaagcctctctac
atcgacaccaaaatgcggcccagtggggaagcgggcttccctccggtcggcaggcagagc
gggcgggggcccctgcggcggcaggagacggagaacaagtacgagaccgacccgggcaag
gaccgcagggacgacaagaagggcgtgctcgtcaacatcgtggacgcatcccagcagaag
tcagctgggctgctgatggtccacacagtggacgcggccaggccggaggacttcctgcag
gaagaggacgagaaagccgacccggaaacgcagccagaccatccgccatccgaggcgcct
gaaggcgcccccgaaaccgaaggtgctttcccgacccccgcgggccccgagcccacggcc
gccaccgccgccgcgcccggcaggaccatcgtagcggcgggctctgtggaggaggcggtg
atcctgccgttccgcatccctcctccgcctctggcatccgtggacctggacgaggatttt
attttcacagagccattgcctcctcccctggaatttgccaatagttttgatatccccgat
gaccgggttgcttctgtccccgctctctcagacctggtcaagcagaaaaaaaatgacacc
tcccagtccccttccttgaactccagccagccaaccaactctgcagacagtaagaagccg
gctagtctctcaaactgtctgcccacctcattcctgccgccccctgaaagctttgatgcc
gtcacggactccgggatcgaggaggtggacagccggagcagcagcgaccaccacctcgag
acgaccagcaccatctccacggtgtccagcatctccaccctgtcctccgagggcggggaa
aacgcggacacctgtacagtctatgcagacgggcaagcctttatggttgacaaaccccca
gtacctcccaagccaaaaatgaagcccataatccacaagggcaacaccctctaccacgac
gcgctgctggaggaggacgtggacagcttcgtgatccccccccctgcacctccgccgccg
cctggcggggcccagcctggccccacgaaggccatccagccaaggacctccaggttgtgg
ggggacgtctcggaggtcaaaagtccgattctctcaggcccaaaggcgaacgtgattagt
gagttaaactcaatcctgcagcaaatgaaccgagagaaatcggcaaagccaggggaagga
ctggacctgacaccgggaaccaagcccgccggcctcgcccccagaggccccgaggtcatg
agcaccgtctcaggtacgcggagcacaacggtcaccttcaccgttcgccctgggacctcc
cagcccatcaccctgcagagccggcccccggactacgagagcaggaactcgggacccaga
cgcgcccccagccctgtggtctcgccaacagagctgagcaaagaggtcctgcccaacccc
ctgcccaccgccactgcggccccctcacccaccctctcggatgtcttcagccttccgagc
cagcccccgcccggggacctgtttggcttgaacccagcgggacgcagcaggtcaccgtcc
ccctccatcctgcaacagccaatctccaataagccttttacaactaagcctgtccacctg
tggactaaacccgatgtggcagactggctggaaagtctaaacctgggtgaacataaagag
gccttcatggacaatgagatcgacggcagccacctcccaaacctccagaaagaagacctc
atagatctgggcgtgactcgagtcgggcacaggatgaacatagaaagggctctcaaacag
ctgctggacagataa
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