Cervus canadensis (wapiti): 122431656
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Entry
122431656 CDS
T07554
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad02010
ABC transporters
ccad04148
Efferocytosis
ccad04975
Fat digestion and absorption
ccad04979
Cholesterol metabolism
ccad05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122431656 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122431656 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
122431656 (ABCA1)
04979 Cholesterol metabolism
122431656 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
122431656 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccad02000
]
122431656 (ABCA1)
Transporters [BR:
ccad02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
122431656 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
122431656
NCBI-ProteinID:
XP_043308836
LinkDB
All DBs
Position
30:complement(26971084..27104238)
Genome browser
AA seq
2263 aa
AA seq
DB search
MAYWSQLRLLLWKNLTFRRRQTCQLFLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDARRLLLYSHRDT
SMKDIRKVLKTLYQIERSSSRLKLQDFLVDNETFSEFLHLNLSLPRPTVDKMLGADVSLR
KVFLQGYQLHLTNLCNGSKLGEVIRLGDQEVSRLCSLPREKLNAAEQVLHSNLDILKPIL
TKLNSTSLFPSEELAEATKALLDSLGNLAQELFSMRSWSDMRQEVMFLTNMNNSGSSTQI
YQAVSRIICGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEDDAGTFYDNSSSPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPVTRQLMTEVNKTFQELAVFHDLEGMWQELS
PKIWTFMESSSEMDLVRTLLDSRGNDDFWEQRLEGLDWKAKDIVAFLAKHPEDVQSTNGS
VYTWREAFNETNQAIQTISRFMECVNLNKLEPVATEVLLINKSMELLDERKFWAGVVFTG
IAPGSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKKTGVYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFV
FLCVFATVTILQCFLISTLFSRANLAAACGGIIYFMLYLPYVLCVAWQDYVGFTLKIFMS
LMSPVAFGFGCEYFALFEEQGIGVQWDNLFESPTKEDGFNLTTSVSMMLFDTFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSSQKGASEICMEEEPTHLKLGVS
IQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKVVSELPPAGQSGGTGGEVQRLVALTQDVSAISNLIRKHVAEARLVE
DIGHELTYVLPYEAAREGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVD
AETSDGTLPARRNRRVFGDKQSCLRPFTEDDAMDPNDSDIDPESRETDLLSGVDGKGSYQ
VKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLE
LQPWMYNEQYTFVSNDAPEDVSTQELLNALTGTPGFGTRCMEGNPIPERPCLVGEEKWTT
APVPQTITDLFRNGNWTMENPSPTCQCSSDKIKKMLPVCPLGAGGLPPPQRKQNTADILQ
NLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSQSLPPSEEVNDAIKQM
KKHLKVVKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANL
QKGANPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQ
ERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVL
ALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNN
INDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAV
EGVVFFLITVLIQYRFFIRPRPVKAKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELT
KVYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTKGDAFLNKNSIL
SDIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYG
EKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVV
LTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEF
FELAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFV
NFAKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atggcttattggtctcagctgagattgctgctctggaagaacctcactttcagaagaaga
caaacatgtcagctgtttctggaagtggcctggcctctattcatcttcctgatcctgatc
tccgtgcggctgagctacccaccctacgaacaacatgaatgccactttccaaacaaagcc
atgccctctgcaggaacacttccttgggttcaggggattatctgtaatgccaataacccc
tgtttccgttatccaactcctggtgaggctccgggagttgttggaaactttaacaagtcc
attgtatctcgcctgttctcagacgctcggcggcttctcttgtacagccacagagacacc
agcatgaaggacatacgcaaagttttgaagacgttataccagatcgagcgttccagctca
cgcttgaaacttcaggacttcctggtagacaatgaaaccttctctgaattcctgcatctc
aacctctctctgccaaggccaactgtggacaagatgctgggggctgatgtcagtctccgc
aaggtatttttgcaaggctaccagttacatttgaccaatctctgcaacggatcaaaattg
ggagaggtgattcgacttggtgaccaagaagtctccaggctttgcagcctgccgagggag
aaattgaacgcagcagaacaggtgcttcattccaacctggatatcctgaagccaatcctg
acaaaactaaactctacatctctcttcccgagtgaggagctggctgaagccacaaaagct
ttgctggatagtcttgggaatctggcccaagagctgttcagcatgaggagctggagtgat
atgcggcaggaggtgatgtttctgaccaacatgaacaactcaggctcctccacccagatc
taccaggctgtgtcccgcatcatctgcggccatcccgagggcgggggcctgaagatcaag
tccctgaactggtacgaggacaacaactacaaagccctcttcgggggcaatggcacggaa
gacgacgccggcaccttctacgacaactcttcatctccttattgcaatgatttgatgaag
aatctggagtccagtcctctttcccgcatcatatggaaagctctcaagcccctgcttgtt
ggaaagatcctgtatacacctgacactcctgtcacaaggcagcttatgactgaggtgaat
aagaccttccaggaactggctgtgtttcatgatctagaaggcatgtggcaagagctcagc
cccaagatctggacctttatggagagcagctcagaaatggaccttgtccggacactgttg
gacagcagaggcaatgatgacttttgggaacagcgattggaaggcttagactggaaggcc
aaagatatcgtggcatttctggccaaacacccagaggatgtgcagtccaccaatggctcc
gtgtacacctggagagaagccttcaatgagaccaaccaggcaatccagaccatctctcgt
ttcatggagtgtgtcaacctgaacaagctagaaccagtagcgacagaggttctgctcatc
aacaagtccatggaactcttagatgagcgcaagttctgggctggcgtcgtgttcactgga
atcgctcctggcagtgtcgagttaccgcatcatgtcaagtacaagatccggatggacatc
gacaatgtggagaggacgaataagatcaaggacgggtactgggaccctggtcctcgggct
gacccctttgaagatatgcggtatgtctggggaggcttcgcttacttgcaggacgtggtg
gagcaggcaatcatcagggtgctgacgggcacagagaagaaaactggcgtgtacatgcag
cagatgccttacccctgttatgttgatgacatcttcctgcgggtcatgagccggtccatg
cctctcttcatgacgctggcctggatctactcagtggctgtgatcatcaagggcattgtg
tacgagaaggaggcgcggctgaaggagaccatgcgcatcatgggcctggacaacggtatc
ctctggttcagctggttcatcagtagcctcatccctctgcttgtgagcgccggcctactg
gtggtcatcctgaaattgggaaacctgctaccctacagcgaccccagcgtggtgtttgtc
tttctgtgtgtgttcgccacggtgaccatcctgcagtgcttcctgattagcacgctcttc
tccagagccaacctggcggccgcctgtgggggcatcatttacttcatgctatacctgccg
tatgtcctgtgcgtggcgtggcaagactacgtgggctttaccctcaagatcttcatgagc
ctgatgtctcctgtggcttttgggttcggctgtgagtacttcgcccttttcgaggagcag
ggcattggggtacagtgggacaacctctttgagagccccacaaaggaggatggcttcaac
ctcaccacctccgtctccatgatgttgtttgacaccttcctctacggggtgatgacgtgg
tacatcgaggctgtgtttccaggccagtatggaatccccaggccttggtattttccttgt
actaagtcctactggttcggcgaggaaagtgatgagaagagccaccctggttccagccag
aagggagcatcagaaatctgcatggaggaggaacccacccatctgaaactaggtgtgtcc
attcagaacctgatgaaggtttaccgagatggcatgaaggtggctgttgatggcctggcc
ttgaatttctacgaggggcagatcacctccttcctgggccacaatggagctggcaagacc
accaccatgtccatcctgactgggctgttccctcccacctcgggcactgcctacatccta
gggaaagacatccgctccgagatgagcaccatccggcagaacctgggggtctgtccgcag
cataatgtgctgttcgacatgctgactgtcgaggagcacatttggttctatgcccgcctg
aaagggctctccgagaagcatgtgaaagctgagatggagcagatggccttggatgttggt
ttgccaccaagcaaactgaaaagcaaaacaagtcagctgtcaggtggaatgcagagaaag
ctgtctgtggctttggcctttgttgggggatccaaggttgtcattctggatgagcccaca
gctggtgtggacccttactcccgcagggggatatgggagctgctgctgaaataccgacaa
ggccgcaccatcatcctgtccacacaccacatggatgaggcggacatcctgggggacagg
atcgccatcatttcccacgggaagctctgctgcgtgggctcctccctgttcctaaagaac
cagctggggacaggctactacctgaccctggtcaagaaggacgtggagtcttccctcagc
tcatgcagaaatagcagtagcactgtgtcatacctgaaaaaggtggtgtctgagcttccc
ccagctgggcagagtggaggcacaggaggagaggtgcagaggctggtggcgctgactcaa
gatgtctccgcgatctccaacctcatcaggaagcatgtggccgaggcccggctggtggaa
gacatcgggcatgagctgacctatgtgctgccctatgaggcagccagagagggagccttt
gtggaactcttccacgaaattgacgaccggctctcagacctaggcatctccagttacggc
atctcagagactactctggaagaaatatttctcaaagtggctgaagagagtggagtggat
gccgagacctcagatggcaccttaccagcaagacgaaacagacgagtctttggggacaag
cagagctgtcttcgcccttttactgaagacgatgctatggatccaaatgattccgacata
gatccagaatccagagaaacagacctgctcagtggggtggacggtaaaggttcctaccag
gtgaagggctggaagctcacacagcagcagtttgtggcccttttgtggaagagactgctg
attgccagacggagtcggaagggattctttgctcagattgtcctgccagctgtgtttgtc
tgcatcgccctggtgttcagcttgattgtgccgccctttggcaagtaccccagcctggaa
cttcagccctggatgtacaatgaacagtacacgtttgtcagtaatgatgcacctgaggat
gtgagcacccaggagctcttaaatgctcttaccggaacgcctggctttgggacccgatgt
atggaaggaaacccgatcccagaaaggccctgcttggtgggagaggagaagtggaccacc
gccccagtcccccagaccatcacggacctcttccgaaatggaaactggacgatggagaac
ccctcgcccacctgccagtgtagcagtgacaaaatcaagaagatgctgcctgtgtgcccc
ctgggggcaggggggctgcctcctcctcaaagaaaacagaatactgccgacatccttcag
aacctcacaggaagaaacatttcggattatctggtgaagacatacgtgcagatcatagcc
aaaagcttaaagaacaagatctgggtgaatgagtttaggtatggtggattttccctgggt
gccagtaattctcagtcacttcctccgagtgaagaagttaatgatgccatcaagcaaatg
aagaaacacttgaaggtggtcaaggacagttctgcagaccgatttctcagcagcttggga
aggttcatgacaggactggacacgaaaaataacgtcaaggtgtggttcaacaacaagggc
tggcatgccatcagctctttcttgaatgtcatcaacaatgccattctccgggccaatctg
cagaagggagcaaaccccagccagtatgggattactgctttcaatcacccactgaacctc
accaagcagcagctctcagaagtggctctgatgaccacatcagtggacgtccttgtgtct
atctgtgtcatctttgcgatgtccttcgtcccggccagctttgtcgtgttcctgatccag
gagcgcgtcagcaaagcaaagcacctgcagttcatcagtggagtgaagcctgtcatctac
tggctctccaattttgtctgggacatgtgcaactacgtggttcctgccacgctggtcatt
atcatcttcatctgcttccagcagaagtcctatgtgtcctctaccaacctgcctgtgctc
gctcttctgcttctgctgtatgggtggtccatcacgcctctcatgtacccagcctccttt
gtgttcaagatccccagcacggcctacgtggtcctcaccagcgtgaacctcttcatcggc
atcaatggcagtgtggccacgtttgtgctggagctcttcaccaacaataagctgaataac
atcaatgatatcctgaagtcagtgttcttgatcttcccacatttttgcctgggacggggg
ctcattgacatggtgaaaaaccaggcgatggctgatgccttggaaaggtttggggagaat
cgctttgtctcaccactgtcttgggacttagtgggacgaaatctcttcgccatggctgtg
gaaggggtggtgttcttcctcatcactgtgctgatccagtaccgattcttcatcaggccc
agacctgtaaaggcaaagcttcctcctctgaatgatgaggatgaagatgtgaggcgggaa
agacagagaattcttgatggtggaggacagaatgacatcttggaaatcaaagagttgact
aaggtatacagaagaaagaggaaacctgctgttgacaggatttgcgttggcattcctccc
ggtgagtgctttggacttctgggtgttaatggagctgggaaatcatcaacttttaagatg
ttaacgggagataccactgttaccaagggagatgctttccttaacaaaaatagtatctta
tcagacatccatgaagtgcatcagaacatgggctattgccctcagtttgatgccattaca
gagctgctgactggaagagaacatgtggaattctttgcccttttgagaggagtcccggag
aaagaagtaggcaaggttggcgagtgggcgattcggaaactgggccttgtgaagtatgga
gaaaaatatgctgggaactacagtggaggcaataaacgcaagctctcaacagccatggct
ttgattggtgggcctccagtggtgtttctggatgaaccaaccacaggcatggaccccaaa
gcccggcgcttcctgtggaattgtgccctaagtatcatcaaggaagggagatcagtagtg
ctcacctctcacagtatggaagaatgtgaagctctttgcactaggatggcaattatggtc
aatgggcggttcaggtgtcttggcagtgttcaacatctgaaaaataggtttggagatggt
tatacaatagtcgtacgaatagcagggtcgaaccctgacctgaagcctgtacaggagttc
tttgaactcgcctttccaggaagcgtcctgaaggagaagcaccggaacatgttgcagtac
cagcttccgtcttcactgtcttccctggccaggattttcagcatcctttcccagagcaaa
aagcgactccacatagaagactactctgtctctcagacaacacttgaccaagtatttgta
aactttgccaaggaccaaagtgatgatgaccacttaaaggacctgtcattacacaaaaac
cagacggtagtggatgttgcagtcctcacatctttcctgcaggatgagaaagtcaaagaa
agttatgtatga
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integrated database retrieval system
