KEGG   Cervus canadensis (wapiti): 122431693
Entry
122431693         CDS       T07554                                 
Symbol
WHRN
Name
(RefSeq) whirlin isoform X1
  KO
K21879  whirlin
Organism
ccad  Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ccad03037]
    122431693 (WHRN)
Cilium and associated proteins [BR:ccad03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   122431693 (WHRN)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 USH1C_N CCM2_C HHD_RTEL1 PAH_ZNF598 WIV_dom_3
Other DBs
NCBI-GeneID: 122431693
NCBI-ProteinID: XP_043308984
LinkDB
Position
30:complement(35607491..35696498)
AA seq 918 aa
MNAPLDGLSVGSSSTGSLGSAAGAGGGGGAGLRLLSANVRQLHQALTALLSEAEREQFTH
CLNAYHARRNVFDLVRTLRVLLDSPVKRRLLPMLRLVIPRSDQLLFDQYTAEGLYLPATT
PSRQPAWGGPDGAGPGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKE
GLRVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVYSAGRIPGGYVTNHIYTWVDPQ
GRSISPPSGLPQPHGSALRQHEGDRRSTLHLLQGGDEKKVNLLLGDGRSLGLTIRGGAEY
GLGIYVTGVDPGSEAESSGLKVGDQILEVNGRSFLNILHDEAVRLLKSSQHLILTVKDVG
RLPHARTTVDETKWIASSRIGDAAASCSGFPGDLTAEGTNKLGFYKGPAGSQVTLSSLGN
QTRGLLEEQARHLLTEQERATLAYYLEEYRGGSVSVEALVMALFELLNTHAKFSLLSEVR
GTISPQDLDRFDHLVLRREIESMKARQPPGPAGGDTYSTVSYSDTGSSIGSHGTSTTVSS
ARERLLWLIDLMENTLDLEETGEAVQGNVNTLSDVSLDDVKFTSKGLPSYKPPPPPPPLT
QGHDHLLIQPRKPGREDLQPPSSASSHSGIVFSAPRNCSPPAGTAPVPEAPAAQDSPSSP
LYASISPANPGSKRPLDTHLALVNQHPIGPFPRVQSPPHLKSSPAEATLAGGGLPPPCPS
GRPDQAGTNQHFVLVEVHRPDSEPDVNEVRALPQTRTASTLSQLSDSGQTLSEDSGVDAG
EAEASAPGRGRQTASTKSRSSKETPRNERTPEGATKPPGLLEPTSTLIRVKKSAATLGIA
IEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFK
TKERDYIDFLVTEFNVLL
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgaacgcgccgctggacggcctgtcggtgggctcgtcctccaccggctcgctgggctcg
gcggccggggcgggcggcggcgggggcgcggggctgcgactgctatctgccaacgtgcgc
cagctgcaccaggcgctgaccgcgctgctgagcgaggcggagcgggagcagttcacgcac
tgcctgaacgcctaccacgcgcgccgcaacgtcttcgacctggtgcgcaccctgcgcgtg
ctgctggacagcccggtcaagcggcgcctgctgccgatgctgcggctggtcatcccgcgc
tccgaccagctgctcttcgaccagtacacggcggagggcctctacctgcccgccaccacc
ccctccaggcagcccgcctggggcggccccgacggcgcggggcccggggaggtgcgtctg
gtgagcctgcggcgcgccaaggcccacgagggcttgggcttcagcatccgcgggggctcg
gagcatggcgtgggcatctatgtgtcgctggtggagccgggctctctggccgagaaggag
gggctgagagtcggggaccagattctgcgtgtcaacgacaaatccctggcccgagtgacc
cacgctgaggccgtcaaggctctcaagggctccaagaagctggtgctatccgtgtactca
gcggggcgcatccccggcggctacgtcaccaaccacatctacacctgggtggacccccag
ggccgcagcatctcgccgccctcaggcctgccccagccccacggcagtgccctgcggcag
catgagggtgaccggaggagcaccctacacctcctgcaaggcggggatgagaaaaaggtg
aacctgctgctgggggacggccggtccctgggcctcaccatccgcgggggagcggagtac
ggcctgggcatttacgtcaccggcgtggacccaggctccgaagcagaaagcagcgggctc
aaggtcggggaccagattctggaggtgaatgggcggagctttctcaacatcctgcacgac
gaggcggtcaggctgctcaagtcatcccagcatctcatcctgaccgtgaaggacgtcggg
cggctgccccacgcccgcaccaccgtggacgagaccaagtggatcgccagttcccggatc
ggggacgctgccgccagctgctcagggtttcccggggatctcacagcagaagggaccaac
aagctggggttttacaaggggccagccggctcccaggtgaccctgagcagcctggggaac
cagacgcgggggctgctggaggagcaggcgcggcacctgctgaccgagcaggagcgtgcc
accctggcctactacctggaggagtaccgcggcggcagcgtgtccgtggaggccctagtc
atggccctgttcgagctgctcaacacccatgccaagttctcgctcctctccgaggtgaga
ggcaccatctccccccaagacctggaccgcttcgaccacctggtgctgagacgggagatc
gagtccatgaaggcgcggcagcccccgggtcctgcaggcggggacacctactccacggtc
tcctacagcgacacgggctcgtccataggcagccacggcacctccaccaccgtcagctca
gccagggagcgactgctgtggctcatagacctgatggagaacactctggacctggaggag
accggggaggccgtccagggcaatgtgaacaccctctcagacgtttctctggatgatgtc
aagttcacctccaaggggctgcctagctacaagccaccgcctcccccgccccctctcacc
caaggccacgaccacctcctcatccagccgaggaagccgggcagagaggacctccagccg
ccttcctccgcatcttcccactcgggcatcgtcttctcggctccgcggaactgcagtccg
ccagcaggcactgctcctgtgccggaggcccccgcagcacaggactcaccctcctccccc
ctctatgcctccatctccccggccaacccgggctccaagaggccgctggacacccacctg
gccctggtcaaccagcaccccatcggccccttcccgcgggtccagtcacccccgcacctg
aaaagctcccccgcagaggccacgctggccggcggtggccttcccccaccctgcccctcc
ggccgcccggaccaggcgggcacgaaccagcattttgtcctggtggaggtgcaccgcccg
gacagcgagccggacgtgaatgaagtgagggcgctgccccagacacgcaccgcctccacg
ctctcccagctctcagacagcgggcagacgctgagcgaggacagcggcgtggacgccggc
gaggcagaggccagcgccccaggccgaggcagacagactgcgtccaccaagagcaggagt
agcaaggagacgcctcggaatgagaggacccccgagggggccaccaaacctcccgggctc
ttggagcccacgtccaccctcatccgcgtgaagaaaagtgcggccaccctgggcatcgcc
atcgagggtggtgccaacacccgccagcccctgcctaggatcgtcacgattcagcgaggc
ggctcagcccacaactgcgggcagctcaaggtggggcacgtgatcctggaagtgaacggg
ctgacgcttcggggcaaggagcaccgggaggccgcgcgcatcatcgcggaggccttcaag
accaaggagcgagactacatcgactttctggtcaccgagttcaacgtgctgctctag

DBGET integrated database retrieval system