Cervus canadensis (wapiti): 122431693
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Entry
122431693 CDS
T07554
Symbol
WHRN
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccad03037
]
122431693 (WHRN)
Cilium and associated proteins [BR:
ccad03037
]
Primary cilia and associated proteins
USH complex and associated proteins
122431693 (WHRN)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
USH1C_N
CCM2_C
HHD_RTEL1
PAH_ZNF598
WIV_dom_3
Motif
Other DBs
NCBI-GeneID:
122431693
NCBI-ProteinID:
XP_043308984
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All DBs
Position
30:complement(35607491..35696498)
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AA seq
918 aa
AA seq
DB search
MNAPLDGLSVGSSSTGSLGSAAGAGGGGGAGLRLLSANVRQLHQALTALLSEAEREQFTH
CLNAYHARRNVFDLVRTLRVLLDSPVKRRLLPMLRLVIPRSDQLLFDQYTAEGLYLPATT
PSRQPAWGGPDGAGPGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKE
GLRVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVYSAGRIPGGYVTNHIYTWVDPQ
GRSISPPSGLPQPHGSALRQHEGDRRSTLHLLQGGDEKKVNLLLGDGRSLGLTIRGGAEY
GLGIYVTGVDPGSEAESSGLKVGDQILEVNGRSFLNILHDEAVRLLKSSQHLILTVKDVG
RLPHARTTVDETKWIASSRIGDAAASCSGFPGDLTAEGTNKLGFYKGPAGSQVTLSSLGN
QTRGLLEEQARHLLTEQERATLAYYLEEYRGGSVSVEALVMALFELLNTHAKFSLLSEVR
GTISPQDLDRFDHLVLRREIESMKARQPPGPAGGDTYSTVSYSDTGSSIGSHGTSTTVSS
ARERLLWLIDLMENTLDLEETGEAVQGNVNTLSDVSLDDVKFTSKGLPSYKPPPPPPPLT
QGHDHLLIQPRKPGREDLQPPSSASSHSGIVFSAPRNCSPPAGTAPVPEAPAAQDSPSSP
LYASISPANPGSKRPLDTHLALVNQHPIGPFPRVQSPPHLKSSPAEATLAGGGLPPPCPS
GRPDQAGTNQHFVLVEVHRPDSEPDVNEVRALPQTRTASTLSQLSDSGQTLSEDSGVDAG
EAEASAPGRGRQTASTKSRSSKETPRNERTPEGATKPPGLLEPTSTLIRVKKSAATLGIA
IEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFK
TKERDYIDFLVTEFNVLL
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccgctggacggcctgtcggtgggctcgtcctccaccggctcgctgggctcg
gcggccggggcgggcggcggcgggggcgcggggctgcgactgctatctgccaacgtgcgc
cagctgcaccaggcgctgaccgcgctgctgagcgaggcggagcgggagcagttcacgcac
tgcctgaacgcctaccacgcgcgccgcaacgtcttcgacctggtgcgcaccctgcgcgtg
ctgctggacagcccggtcaagcggcgcctgctgccgatgctgcggctggtcatcccgcgc
tccgaccagctgctcttcgaccagtacacggcggagggcctctacctgcccgccaccacc
ccctccaggcagcccgcctggggcggccccgacggcgcggggcccggggaggtgcgtctg
gtgagcctgcggcgcgccaaggcccacgagggcttgggcttcagcatccgcgggggctcg
gagcatggcgtgggcatctatgtgtcgctggtggagccgggctctctggccgagaaggag
gggctgagagtcggggaccagattctgcgtgtcaacgacaaatccctggcccgagtgacc
cacgctgaggccgtcaaggctctcaagggctccaagaagctggtgctatccgtgtactca
gcggggcgcatccccggcggctacgtcaccaaccacatctacacctgggtggacccccag
ggccgcagcatctcgccgccctcaggcctgccccagccccacggcagtgccctgcggcag
catgagggtgaccggaggagcaccctacacctcctgcaaggcggggatgagaaaaaggtg
aacctgctgctgggggacggccggtccctgggcctcaccatccgcgggggagcggagtac
ggcctgggcatttacgtcaccggcgtggacccaggctccgaagcagaaagcagcgggctc
aaggtcggggaccagattctggaggtgaatgggcggagctttctcaacatcctgcacgac
gaggcggtcaggctgctcaagtcatcccagcatctcatcctgaccgtgaaggacgtcggg
cggctgccccacgcccgcaccaccgtggacgagaccaagtggatcgccagttcccggatc
ggggacgctgccgccagctgctcagggtttcccggggatctcacagcagaagggaccaac
aagctggggttttacaaggggccagccggctcccaggtgaccctgagcagcctggggaac
cagacgcgggggctgctggaggagcaggcgcggcacctgctgaccgagcaggagcgtgcc
accctggcctactacctggaggagtaccgcggcggcagcgtgtccgtggaggccctagtc
atggccctgttcgagctgctcaacacccatgccaagttctcgctcctctccgaggtgaga
ggcaccatctccccccaagacctggaccgcttcgaccacctggtgctgagacgggagatc
gagtccatgaaggcgcggcagcccccgggtcctgcaggcggggacacctactccacggtc
tcctacagcgacacgggctcgtccataggcagccacggcacctccaccaccgtcagctca
gccagggagcgactgctgtggctcatagacctgatggagaacactctggacctggaggag
accggggaggccgtccagggcaatgtgaacaccctctcagacgtttctctggatgatgtc
aagttcacctccaaggggctgcctagctacaagccaccgcctcccccgccccctctcacc
caaggccacgaccacctcctcatccagccgaggaagccgggcagagaggacctccagccg
ccttcctccgcatcttcccactcgggcatcgtcttctcggctccgcggaactgcagtccg
ccagcaggcactgctcctgtgccggaggcccccgcagcacaggactcaccctcctccccc
ctctatgcctccatctccccggccaacccgggctccaagaggccgctggacacccacctg
gccctggtcaaccagcaccccatcggccccttcccgcgggtccagtcacccccgcacctg
aaaagctcccccgcagaggccacgctggccggcggtggccttcccccaccctgcccctcc
ggccgcccggaccaggcgggcacgaaccagcattttgtcctggtggaggtgcaccgcccg
gacagcgagccggacgtgaatgaagtgagggcgctgccccagacacgcaccgcctccacg
ctctcccagctctcagacagcgggcagacgctgagcgaggacagcggcgtggacgccggc
gaggcagaggccagcgccccaggccgaggcagacagactgcgtccaccaagagcaggagt
agcaaggagacgcctcggaatgagaggacccccgagggggccaccaaacctcccgggctc
ttggagcccacgtccaccctcatccgcgtgaagaaaagtgcggccaccctgggcatcgcc
atcgagggtggtgccaacacccgccagcccctgcctaggatcgtcacgattcagcgaggc
ggctcagcccacaactgcgggcagctcaaggtggggcacgtgatcctggaagtgaacggg
ctgacgcttcggggcaaggagcaccgggaggccgcgcgcatcatcgcggaggccttcaag
accaaggagcgagactacatcgactttctggtcaccgagttcaacgtgctgctctag
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