KEGG   Cervus canadensis (wapiti): 122431966
Entry
122431966         CDS       T07554                                 
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    122431966 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccad03400]
    122431966 (APTX)
Enzymes [BR:ccad01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     122431966 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     122431966 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     122431966 (APTX)
DNA repair and recombination proteins [BR:ccad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     122431966 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     122431966 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA FtsK_SpoIIIE_N
Other DBs
NCBI-GeneID: 122431966
NCBI-ProteinID: XP_043309569
LinkDB
Position
30:complement(8393314..8408906)
AA seq 347 aa
MWSRVMTRVCWLVRQDNRHQRIKLPHLEAVMVGRSPETKITDKKCSRQQVQLKAECNKGY
VKVKQVGVNPTSIDSAIIGKDQEVKLQPGQVLYLVNELYPYIIEFEEETKSPGLETHRKR
RRSGSSDPAERRAAPEAEPRPGLEPGSSPRQWCMPPKKEKDASTRKESLGHWSQGLKISM
EDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWASIPSLKAVTREHLELLRHMHTVGEKVI
ADFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVVE
MVQEAGRVTVRDGMPELLKLPLRCHECRQLLPSIPQLKEHLRKHWSK
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgtggtccagagtaatgacgcgggtgtgctggctggtgagacaggacaaccggcaccag
cgaatcaaactcccacatttggaagctgtcatggttgggcgcagcccagagaccaagatc
accgacaagaagtgttctcgacagcaagtacagttgaaagcagagtgtaacaaaggctat
gtcaaggtaaagcaggtaggggtcaatcccaccagcattgactcagccataattgggaag
gaccaggaggtgaagctgcagcctggccaggtcctctacctggtgaatgaactttatccg
tatattatagagtttgaggaagagacaaagagccctggcctggagactcacaggaagaga
aggaggtcaggcagtagtgatcctgcagaaaggcgtgctgccccggaagctgagccccgc
ccaggactggaacctgggagcagccctcgccagtggtgtatgcctccaaagaaggagaag
gatgcctccaccagaaaggaatccttgggccactggagtcaaggcttgaagatttctatg
gaggaccctaaaatgcaggtttacaaagatgaacaggtggtggtgataaaggataaatac
cccaaggctcgctaccactggctggtcttaccttgggcctccattcccagtctgaaggct
gtgaccagagaacatcttgagctcctcagacacatgcacactgttggggaaaaagtgatt
gctgacttcgctgggtctagcaaactccgcttccgtttgggctaccacgccattcccagc
atgagccatgtacatctccatgtgatcagccaggattttgattctccttgccttaaaaac
aaaaaacactggaattctttcaatactgaatacttccttgaatcacaagctgtggttgag
atggtgcaagaggctgggagagtgaccgtccgagatgggatgcccgagctcctgaagctg
cccctccgttgtcacgagtgccggcagctgctgccttccatccctcagctgaaggagcac
ctcaggaagcactggtccaagtga

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