Cervus canadensis (wapiti): 122432554
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Entry
122432554 CDS
T07554
Symbol
MSR1
Name
(RefSeq) macrophage scavenger receptor types I and II isoform X1
KO
K06558
macrophage scavenger receptor 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122432554 (MSR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122432554 (MSR1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ccad04090
]
122432554 (MSR1)
Membrane trafficking [BR:
ccad04131
]
Endocytosis
Phagocytosis
Scavenger receptors
122432554 (MSR1)
CD molecules [BR:
ccad04090
]
Proteins
122432554 (MSR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
Macscav_rec
Collagen
SRCR_2
Motif
Other DBs
NCBI-GeneID:
122432554
NCBI-ProteinID:
XP_043310502
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All DBs
Position
31:19336793..19412935
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AA seq
453 aa
AA seq
DB search
MAQWHDFPDQQEDTDSCTESVKFDARSMTALLPPSPKNGPTLQERMKSYKAALITLYLIV
FVVLVPIIGIVAAQLLRWEMKNCTVGSVNADVSPSLEGRGNGSEDEMRFREVVMERMSNM
EKRIQYLSDNEANLLDSKNFQNFSITTDQRFNDVLFQLNSLLSSIQGHENIIGDISKSLV
GLNTTLLDLQLSIETLTGRVQEHAFKQQEEMRKLEERVYNASAEIKSLDEKQVHLEQEIK
GEVKLLNNITNDLRLKDWEHSQTLKNITLFQGPPGPPGEKGDRGPAGDIGLPGIPGPIGP
PGLKGDRGLFGFPGSRGFPGPVGKTGKPGINGQKGQKGEKGSGSMQRLSNTVRLVGGSGP
HEGRVEIFHEGQWGTVCDDRWELRGGLVVCRSLGYKGVQSVHKGAYFGKGTGPIWLNEVF
CFGKESSIEECRIRQWGVRVCSHDEDAGVTCTT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtggcatgactttcctgatcagcaggaggacactgacagctgtacagagtct
gtgaagttcgatgctcgctcaatgacagctttgcttcctcccagtcctaaaaatggccca
actcttcaagagaggatgaagtcttataaagctgcactgatcaccctttatctcattgtg
tttgtagttctcgtgcccatcattggcatagtggcagctcagctcctgagatgggaaatg
aagaattgcacagttggttcagttaatgcagatgtatctccaagtctggaaggcagagga
aatggcagtgaagatgaaatgagatttcgagaagtcgtgatggaacgcatgagcaacatg
gaaaagagaatccagtatctttcagacaatgaagccaatctcctagattctaagaatttc
cagaatttcagcataacaactgatcagagatttaacgatgttcttttccagctaaattcc
ttactttcctccatccagggacatgagaatatcataggtgatatctccaagtcattagta
ggtctgaacaccacattacttgatttgcagctcagtattgaaacactgactggcagagtc
caggagcatgcatttaaacaacaagaggagatgcgtaaattagaggagcgtgtatacaat
gcatcagcagaaattaagtctctagatgaaaaacaagtgcatttggaacaggaaataaaa
ggggaagtgaaactgttgaataatatcactaatgatctgaggctgaaggattgggaacat
tctcagacattgaaaaatatcactttattccaaggtcctcctggacctccaggagaaaaa
ggagatagaggccctgctggagacattggtctaccaggcatcccaggtccaataggtcct
ccaggtcttaaaggtgatcgggggctctttggttttcctggaagtcgaggattcccagga
ccagtggggaagaccgggaagccaggaattaatggacaaaaaggccagaagggagaaaaa
gggagtgggagcatgcaaagactctctaatacagtccgattggtgggtggcagtggccct
cacgaaggcagagtggagattttccacgaaggccagtggggtacggtgtgtgacgaccgc
tgggaactgcgtggaggactggtcgtctgtaggagtttgggatacaaaggtgttcaaagt
gtgcataagggagcttattttggaaaaggtacaggtccaatatggctgaatgaagtattt
tgttttgggaaagagtcatccattgaagagtgcagaattagacagtggggtgtgagagtc
tgttcgcacgacgaagatgctggggtcacttgcactacataa
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