Cervus canadensis (wapiti): 122432774
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Entry
122432774 CDS
T07554
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03430
Mismatch repair
ccad03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122432774 (PMS2)
03460 Fanconi anemia pathway
122432774 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccad03400
]
122432774 (PMS2)
DNA repair and recombination proteins [BR:
ccad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122432774 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
UfSP_MPN_N
Motif
Other DBs
NCBI-GeneID:
122432774
NCBI-ProteinID:
XP_043310842
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Position
32:complement(31502542..31524520)
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AA seq
864 aa
AA seq
DB search
MERADGPSSELAKAIKPIDRKSVHQICSGQVVLGLSTAVKELVENSVDAGATSIDLRLKD
YGVELIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDV
TISTCHTSVKVGTRLVFDHNGKILQKTPYPRPRGTTVSVQQLFYTLPVRHKEFQRNIKKE
FAKMVQVLQAYCIISAGVRISCTNQVGQGKRQPVVCTSGSSSMKENIGLVFGQKQLQSLI
PFVQLPPSDSICEEYGLSCSQALHNLFCISGFISHCAHGVGRSSTDRQFFFINRRPCDPA
KVSRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLI
GMFESDVNKLQVSQQPLLDVEGHLIKRPSAEMENPEPEKRDDPAPLRTHGEEKRAVTISR
LREAFSLRHSTENKSRGPKATDPRRVSLRQKSSAQVPRASGPPCSQKHISEPGEEGRTSA
QGPHDLMGRVEMEEDSGHGSASASSEEASSTPETSGHPSTDRAASSPEGRFSQENVESRE
KLPETDCRLSGTKCHLDQESGSTSRVLPQPTKLSSPNAKRFKKEGIPLNPDVLPESVKTQ
SASASEVDVAVTINKKIVPLDFSMSSLAKRIKQSCQQEQQRDSQQNYRKFRAKICPGENQ
AAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTVL
QGQRLIAPQTLNLTAVNEAILIENLEIFRKNGFDFVIDEHAPVTERAKLISLPTSKNWTF
GPQDIDELLFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTPLNTSEMKKLITHMGEMD
HPWNCPHGRPTMRHIANLDVISQS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagcagacgggccgagttcagaacttgctaaggccatcaaacctatcgatcgg
aagtcagtccatcagatttgttctgggcaagtggtacttggtctaagcactgctgtgaaa
gagttggtagaaaatagtgtggatgccggtgcaactagtattgatctcaggcttaaagac
tatggagtggagctcatcgaagtttcagacaatggatgcggggtagaagaagaaaatttt
gaaggcttaactctgaaacatcacacttcgaagattcaggagtttgctgacctcactcag
gttgaaacttttggctttcgaggggaagctctgagctcactctgtgcactgagcgatgtg
actatttctacctgccacacgtctgtgaaggttgggactcgattggtgtttgatcacaat
ggaaaaatcctccagaaaaccccctacccacgacccagggggacgacggtcagcgtgcag
cagctattttatacgcttcctgtgcgccataaggagtttcaaaggaatattaagaaggag
ttcgccaagatggttcaggtgttacaggcatactgcatcatttcagcgggtgtccgtata
agttgcaccaatcaggttgggcagggtaagcggcagcctgtggtgtgcaccagcggaagc
tccagcatgaaggaaaacatcggattggtgtttgggcagaagcagctgcaaagcctcatc
ccttttgtgcagctgccccctagtgactccatctgcgaagaatacgggctgagctgttcc
caggctctgcataacctgttttgtatctcaggttttatttcgcactgtgctcatggcgtg
ggaagaagttcaacggacagacagtttttctttatcaatcggcggccttgtgatccagca
aaggtttccagacttgtgaatgaggtctatcacatgtataatcgacatcagtacccattt
gttgttcttaatatttctgttgattcggaatgtgtcgacatcaacgttactccagataaa
aggcaaattttactgcaagaggagaagcttttgttggcagttttaaagacgtctttgata
ggaatgttcgagagtgatgttaacaaactccaggtcagccagcagccgctgctggatgtg
gaaggtcacttaataaaaaggccttcagcagagatggagaatcccgagccagaaaagcgg
gatgatcctgctccattaaggactcacggagaagagaaaagggcagtgaccatttctagg
ctgagagaggccttttcccttcgtcactcgactgagaacaagtcccggggtccgaaggcc
accgatccaaggcgggtttctctgaggcagaaaagcagtgcccaggtccctagggcttcg
gggcccccctgctcccagaagcacatctctgaacctggggaggaagggaggacttctgct
caggggccccatgacttgatgggcagagtggagatggaggaggactcggggcacggcagt
gcatctgccagctctgaggaggcgtccagcacccctgagacgagcggccaccccagcact
gaccgggcggcaagctcccccgaaggtaggttttcccaagaaaatgtggagtctcgggaa
aagttacctgaaactgactgtcgtctttcaggcacaaagtgccatttagaccaagaaagc
ggctccacatctagagtcttgccacagcccacgaagctctcatccccaaacgcaaagcgt
tttaaaaaagaagggattcctttaaaccccgacgtccttccagagtcggtgaaaacccag
agtgcatcggcgtccgaggtggatgtagctgtgacaattaataagaaaatagtgcccctt
gatttttccatgagttctttagccaaacgaataaagcagtcgtgtcagcaagaacagcaa
cgagacagtcaacagaattataggaagtttcgggcaaagatttgccctggagaaaatcaa
gcagcagaagacgaactaagaaaagagatcagcaaaacgatgtttgcagaaatggaaatc
attggtcagtttaacttggggtttattatcaccaagctgaatgcagatatcttcatagtg
gaccagcatgccacggacgagaaatacaacttcgagatgcttcagcagcacactgttctc
cagggtcaaaggcttatagcacctcagactctcaacctaacagctgtcaatgaagcgatt
ctaatagaaaatctggaaatattcaggaagaatggctttgactttgttatcgatgaacac
gcgccagttactgaaagagccaagctgatttccttgccaaccagtaagaactggaccttt
ggaccccaggacatagacgagctgctcttcatgctgagcgacagccccggggtcatgtgc
cggccctcccgcgtccggcagatgttcgcctccagagcctgtcgcaagtctgtgatgatt
ggaacccctctaaacacaagcgagatgaagaaactcatcacgcacatgggggagatggac
catccctggaactgtccccatggaaggcccaccatgagacacattgccaacctggatgtc
atttctcagagctga
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