Cervus canadensis (wapiti): 122432847
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Entry
122432847 CDS
T07554
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccad04121
]
122432847 (RBBP6)
Enzymes [BR:
ccad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122432847 (RBBP6)
Ubiquitin system [BR:
ccad04121
]
Ubiquitin ligases (E3)
U-box type E3
122432847 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
122432847
NCBI-ProteinID:
XP_043311019
LinkDB
All DBs
Position
32:16191620..16223471
Genome browser
AA seq
1798 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPIPPPRPLIQRNLQPLMRS
PISRQQDPLMIPVTSSSTHPAPSMSSLTSNQSSLAPPVPGNPSSASAPVPDITATVSISV
HSEKSDGPFRDSDNKILPAAALASEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQSLL
HGQLIPTTGPVRINAARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSE
RSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLAPGVPPPQFSPQFPPGQPPPAGYSVP
PPGFPPAPANLSAPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDE
FTNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFS
RSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQS
PNKRNVPQGETEREYFNRFREVPPPYDMKAYYGRSVDFRDPFEKERYREWERKYREWYEK
YYKGYATGAQPRPSANRENFSPERFLPLNLRNSPFTRGRREDYSGGQSHRSRNVGGNYPE
KLSSRDSHNQKDNTKSKDKEGENAPGDGKGNKHKKHRKRRKGEESEGFLNPELLDTSRKS
REPTSGEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKREKDKPKAKGDKTK
RKNDGSTVSKKETVVKPAKGPQEKLDGEREKSPRSEPPLKKAKEETPKTDNVKSSSSSQK
DEKTVGTPRKAHSKSVKEHQETKPVKEEKVKKDYSKDIKSEKITSKEEKTRKPNEKSKPL
DSKGEKRKRKTEEKSVDKDFESTSMKVSKLEVTEIVKPSPKRKMELDIEKMDRTPEKDKT
SSSAAPAKKIKLNRETGKKIGSTENVSNTKEPSEKLESTSGKVKQEKIKGKVRRKVTGTE
GSSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQS
KWDKDDFESEEEDVKSTSQPVSSVGKPASVIKNVSTKPPNAVKYAEKESESSEKIQKLTK
EVSHEIAQHEVKSSKNSASSEKGKTKDREHSVLEKENPEKRKNNSTQPEKDGNLDRLNEQ
GNFKSLSQSSKETRTSGKEDKHDSIRGSSNKDFTPNRDKKTDYDNREYSSSKRRDERNEL
TRRKDSPSRSKDSASGQKAKPREERDLPKKGTGESKKSNSSPTRDKKPHDHKATYDTKRL
SEETKSVDKNPCKDREKHMLEAKNNKESSGNKSLYILNPPDPQIEKEQVTGQIDKNTIKP
KPQLSHSSRLSSDLTRETDEAAFEPDYNESDSESNVSIKEEETAGKVSKELKDKVVEKAK
ESLDTAAVSQAGVPRSQSQSSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKE
KKKHKKHKKHKKHKKHAGTEAELEKSQKHKHKKKKSKKSKDKEKEKEKDDQKVKSVTV
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataaattttcttctaaactcaactatgataccgtcacctttgat
gggctccacatctccctctgcgacttaaagaagcagattatggggagagagaagctgaaa
gctgccgactgcgacctgcagatcaccaacgcacagacgaaagaagaatatactgatgat
aatgctctaattcctaaaaattcatctgtaattgttagaagaattcctattggaggtgtt
aaatctacaagcaagacatatgttataagtcgaactgaaccagtgatgggaacttcaaaa
gcaattgatgactcttctgcgtctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccaatcaattacatgaagaaacctctgggtccaccacctccgtcttatact
tgtttccgttgtggtaaacctggccattatattaagaattgcccaacaaatggggataag
aactttgaatctggtcctaggattaaaaagagcactggaattcccagaagttttatgatg
gaagtgaaagatcctaacatgaaaggtgcaatgcttaccaacactggaaaatatgccata
ccaactatagatgcagaagcatatgcaattgggaagaaagaaaaaccaccttttttacca
gaggagccgtcgtcatcttcagaagaagatgatcctatcccagatgagttgttgtgtctc
atctgcaaagatattatgactgacgccgttgtcatcccctgctgtggaaacagttactgt
gatgaatgtataaggacagcgctcttggaatcagatgaacatacatgtccaacatgtcat
cagaatgacgtctctcctgatgctttaattgccaataagttcttacgacaggctgttaat
aacttcaaaaatgaaactggttatacgaaaagactaagaaaacagttacccccaccccct
cccccaataccacctccaagaccactcattcagcggaacctacaacctctgatgagatct
ccaatatcaagacaacaggatcctctgatgattccagtgacatcttcatcaactcacccg
gctccatctatgtcttcattaacctctaatcagtcttctttggcccctcctgtccctgga
aacccatcttctgcctcagcccccgtacctgatataactgcaacagtctccatatcagtc
cactcagaaaaatcagatggaccttttcgggattctgataataaaatactgccagctgca
gcacttgcatcagaacattcaaagggagcttcttcaattgcaattactgctcttatggaa
gagaagggttaccaggtgcctgtacttggaaccccctctttgctcggacagtcattattg
catggacagttgatccccacaactggtccagtaagaataaatgctgctcgtccaggtggt
ggtcgaccaggttgggaacattccaacaaacttggatacttggtttctccaccacagcaa
attagaagaggagagaggagttgctacagaagtataaaccgcggacgacatcacagcgaa
agatcacagagaactcaaggcccgtcactaccagcaaccccagtttttgtacctgtccca
ccccctcccttgtatcctcctcctccccacacacttcctctcgctccaggtgttcctcct
ccgcagttttctcctcagtttcctcctggccagccgccacctgctgggtatagtgttccc
cctccaggatttcctccagctccagccaatttatcagcaccttgggtgtcatctggagta
cagactgctcattctaataccatcccaacaacacaagcaccacctttgtccagggaagaa
ttctatagagagcaacgacgactaaaagaagaggaaaagaaaaagtccaagctagatgag
tttacaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtagg
cgctcattttccaggtccaagtctccctatagtggttcatcctattcaagaagttcgtat
acttattctaaatcaagatctggttcaacgcgatcacgttcttattcgcgatcatttagc
cgctcacattctcgttcttattcacgatcgcctccataccccagaagaggcagaggaaag
agtcgaaattaccgttcacggtctagatcacacgggtatcatcgatctaggtcaaggtca
cctccctatagacggtatcattcacgatcaagatctcctcaagcatttaggggacagtct
cctaataaacgtaatgtacctcaaggagaaacagagcgtgaatattttaacaggttcaga
gaagtcccaccaccttacgacatgaaagcttactacgggaggagtgtggacttcagagac
ccgtttgagaaagagcgttatcgggagtgggagagaaagtaccgagagtggtatgagaaa
tactacaaaggctatgctactggagcacagcctagaccatcagcaaatagagagaacttt
tctccagagaggtttttaccgcttaaccttaggaattctcccttcacaagaggccgcaga
gaggattactctggtggacagagtcatagaagtcgaaatgtaggtggcaactatccagaa
aagctttcatcaagagacagtcacaatcagaaggataatacaaagtcaaaagacaaggaa
ggtgaaaatgctccaggagatggtaaaggaaataaacataagaaacatagaaaaagaaga
aagggggaagaaagcgaaggctttctaaacccagagttactagacacttctaggaaatcg
agagagcctacaagtggtgaagaaaataaaacagactcattgtttgttctcccaagtaga
gatgatgctacacctgttagagacgaaccaatggatgctgaatctattacttttaaatca
gtgtctgaaaaagacaagagagaaaaggataaacctaaagcaaaaggtgacaagaccaaa
cggaaaaatgatgggtctactgtatccaaaaaagaaactgttgtaaaacctgctaaaggg
ccccaagaaaaactagatggagagcgtgaaaaatctcctcgatctgaacctccacttaaa
aaagccaaagaggagaccccgaagactgacaatgtgaaatcatcatcttcctctcaaaaa
gatgaaaagacagtcggtacccccagaaaagctcactcaaagtcagtaaaggaacaccag
gagacaaaaccagtcaaagaagaaaaagtgaagaaggactactccaaagacatcaagtca
gagaagataactagtaaagaagaaaagaccaggaagcctaatgagaaaagtaagccactt
gatagcaaaggagaaaaaaggaagagaaaaactgaagaaaaaagtgtagataaagatttt
gagtcaacttcaatgaaagtctctaaattagaagtgactgaaatagtgaaaccatcaccc
aagcgcaaaatggagcttgatattgaaaagatggacaggacacctgaaaaagacaaaact
tcatcatcagctgctccagccaaaaaaatcaaacttaacagagaaactggtaaaaaaatt
ggaagtacagaaaatgtatctaacacaaaagaaccctctgaaaaattggaatcaacatcc
ggcaaagtgaaacaagaaaaaatcaaaggaaaggtcaggcgaaaagtgactggaactgaa
ggatccagctcaacacttgtggattataccagtaccagttcaactggaggcagtcctgtg
cggaaatctgaagaaaaaacagatacaaagcgaactgtcattaaaacaatggaagaatat
aataatgataacacagctcctgctgaagatgttattattatgatccaggttccccaatcc
aaatgggataaagatgactttgaatctgaagaagaagatgttaaatccacctcacagcct
gtatcgagtgtgggaaaacctgccagtgttataaaaaatgttagcactaaaccaccaaac
gcagtcaagtatgctgaaaaagaaagtgagtcatcagagaaaattcagaaactcaccaag
gaggtgagccatgaaattgcacagcatgaggtcaaaagttcaaaaaactctgcatctagt
gaaaaagggaaaaccaaagatcgagagcactcagtattggaaaaggaaaacccagaaaag
aggaagaacaacagcactcagccagagaaagatggtaacctggaccgtctgaatgagcaa
ggaaattttaaaagtctgtctcagtcttccaaagagactagaacttctggaaaagaagat
aagcatgattccattcgaggttcctcaaataaagacttcactcccaacagagacaaaaaa
acagattatgacaacagagagtattcaagttccaaacgtagagatgaaaggaatgaatta
acaagaagaaaagactctccttctcggagtaaagactctgcatctggacaaaaagctaag
ccaagggaggagagagatttgcctaaaaaaggaacaggagagtccaaaaaaagtaattcc
agtcccacgagagacaaaaaacctcatgaccataaagccacttatgatactaaacgctta
agtgaagagacaaaatctgtagataaaaatccttgtaaagatcgtgagaaacatatgtta
gaggcaaagaacaataaagagtcaagtggcaataaatcactttatatacttaacccacct
gacccacagattgagaaagagcaagttactgggcaaattgataagaacaccatcaaacct
aagccccagttaagtcactcctctcgactgtcctctgacttaactagagaaactgatgaa
gctgcttttgaaccagactataatgaaagtgacagtgaaagcaatgtgtctataaaagag
gaagaaactgcaggaaaggtttctaaggaactgaaagataaagtagtggagaaagcaaag
gagagcctggacacggcagcagtcagccaggcaggcgtccccaggagccagagtcagagc
agcccgagtgtcagtccgagcagaagtcacagcccttctggaagccagacccggagccac
agcagcagtgccagttctgcagaaagtcaggacagcaagaagaagaagaaaaagaaggaa
aagaaaaagcacaagaaacataaaaaacataagaagcataagaagcatgcaggcactgaa
gcagaattggaaaaaagccaaaaacacaaacataagaaaaagaagtcaaagaagagcaaa
gataaagaaaaggagaaggagaaggatgaccaaaaagtgaaatctgtcactgtgtag
DBGET
integrated database retrieval system
