KEGG   Cervus canadensis (wapiti): 122433045
Entry
122433045         CDS       T07554                                 
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad05014  Amyotrophic lateral sclerosis
ccad05017  Spinocerebellar ataxia
ccad05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    122433045 (ATXN2L)
   05017 Spinocerebellar ataxia
    122433045 (ATXN2L)
   05022 Pathways of neurodegeneration - multiple diseases
    122433045 (ATXN2L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccad03019]
    122433045 (ATXN2L)
Messenger RNA biogenesis [BR:ccad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122433045 (ATXN2L)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 DUF5415
Other DBs
NCBI-GeneID: 122433045
NCBI-ProteinID: XP_043311399
LinkDB
Position
32:complement(19816789..19828907)
AA seq 1078 aa
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLASTSAPPGPPAAASPCLG
PAAAAGSGLRRGAEGILAPQPPPPQQQHQERQGAAAIGSARGQSTGKGPPQSPVFEGVYN
NSRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKVSEPAGGPRREDI
VDTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSD
DYDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQL
AREIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLAAREGKYIPLPQRVREG
PRGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGA
KSLSSPSSRPSGEASVPPPPAVGRMYPPRSPKSAAPAPISASCPEPPIGSAVPTSSASIP
VTSAVGDPGVGSVSPASPKISLAPTDVKELPAKEPGRTLESQELSRIAGKVPGLQNEQKR
FQLEELRKFGAQFKLQPSSSPETSLDPFPPRILKEEAKGKEKEVDGLLASEPLGSPVSSK
AESVSDKEDKPPLPPAGGAEGPEQPPPPCPSQTGSPPVGLIKGDDKDEGPVAEQVKKSTL
NPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHM
GPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAAGPPL
VAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSS
TPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPPSQHAAPSPVQHQA
GQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQLPHGF
TNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSAST
PSPYPYIGHPQGEQPGQAPGFPGGADDRIREFSLAGGIWHGRADGLQVGQDARVLGGE
NT seq 3237 nt   +upstreamnt  +downstreamnt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgtcggcctcccgggggcaccagcccgcccaacggcggtctcccgggg
cccctggcctccacctcggctcccccaggacctcctgcggccgcctccccctgcctaggg
cctgcagccgctgccgggagcgggctccgtcggggagcggagggcatcttggcgcctcaa
ccgccgccaccacagcagcaacatcaggagagacaaggggcagcggccatcggcagcgcc
aggggacaaagcacaggaaagggacctccacagtcaccggtgtttgagggtgtctacaac
aattccagaatgctgcattttcttaccgctgttgtgggttccacttgtgatgtaaaggtg
aagaatggtaccacctatgaaggtatcttcaagacgctgagctcaaagtttgaactagca
gtggacgctgtgcaccggaaggtatcggagccagcaggtggccctcgtcgggaagacata
gtggacaccatggtgtttaagccgagtgatgtcatgcttgtccacttccgaaatgtcgac
ttcaattatgctactaaagataagttcactgactcagccattgccatgaactcgaaggtg
aatggggaacacaaagagaaggtgcttcagcgctgggaggggggcgacagcaacagtgat
gactacgacctggaatctgacatgtctaatggatgggaccccaacgaaatgttcaagttc
aatgaggagaactatggtgtaaagaccacctatgacagcagtctctcttcttacacggtg
cccttagagaaggacaattcagaagaattccgtcagcgggagcttcgtgctgcccagttg
gcccgagagattgaatcgagcccccagtaccgcctgcggatcgccatggagaatgatgat
gggcgcacagaggaggagaagcacagtgcggttcagcgacagggctcagggcgtgagagc
cccagcttggcagccagggaggggaagtatatccctctaccccagcgagttcgggaaggt
ccccggggaggcgttcgctgcagtagttctcggggcggccggcctggccttagctctttg
ccgcctcgtggccctcaccatcttgacaatagcagccctggcccaggttctgaggcacgc
ggtatcaatggaggcccttcccgcatgtcccctaaggcccagcgacctctgagaggtgcc
aagagtctgtcttcccccagcagcaggccttctggagaagcttctgttccacctcctcct
gcagtgggccgtatgtacccgccacgctctcccaaatcagctgcccccgccccaatctca
gcttcctgtcctgagcctcccattggctcagcagtaccgacctcttcagcttccatccca
gtgacgtcagcagttggggatcctggagtgggctccgtttccccagcttctccaaagatc
tcactggcccccacagatgtaaaagaacttccggccaaggaacctggaaggacgctggag
tcccaggagttgtcccggattgcagggaaagtccctggccttcagaacgaacagaagcgt
tttcagctggaagaactgagaaagtttggggcccagtttaagcttcagcccagtagctcc
cctgagaccagcttggatccttttcctccacggatcctgaaagaggaggccaaagggaag
gagaaggaggtggatggtcttttggcttcagagcccctggggtctcctgtttcctcaaag
gccgaatcagtatcagacaaggaggacaaaccccccttgccaccagcagggggtgccgag
gggccggagcagcctcccccaccttgcccaagccaaactggcagccccccagtgggcctc
atcaagggagatgacaaggatgagggcccagttgctgaacaagtgaagaagtcgacattg
aaccccaatgccaaggagttcaatcccactaagcccctgctctctgtgaataaatccacc
agtactccgacttctcctgggccccggactcattcaactccctccatcccggtgctgaca
gcaggccagagtgggctctatagcccccagtacatttcctacatacctcagatccacatg
ggaccagctgttcaggcacctcagatgtatccgtaccctgtgtccaactctgtgcctgga
cagcagggcaagtaccggggcgccaaaggctccctgcccccccagcgctcggaccaacac
cagccagcctccgcccctcccatgatgcaggccgctgctgccgccgctggtccacctctg
gtggccgccaccccttactcttcctacatcccctacaacccacagcagttcccaggccag
cccgccatgatgcagcccatggcccactacccctcgcagccggtgtttgcccccatgctt
caaagcaacccacgcatgctgacgtcggggagccatccccaggccatcgtgtcatcctcc
acccctcagtacccttctgcagagcagcccaccccccaggccctttatgccaccgttcac
cagtcctatccacaccatgccacgcagctccatgcccaccagccgcagccggccaccacg
cctactgggagccagccgccgtcccagcatgcggcccccagtcctgtccagcaccaggcg
gggcaggccccacacctgggcagtggacagccgcagcagaacctgtaccacccaggggcc
ctgacaggcacgccgccttctctgccaccgggaccttctgcccagtcccctcagagcagc
ttcccccaaccagccgctgtatatgccatccatgcccaccagcagctgccccacggcttc
accaacatggcccatgttacccaggcccatgtccaaactggaatcacagcagccccgccc
cctcaccctggggctccccacccgccccaggtgatgctgctgcacccaccccagagccat
gggggccccccccaaggcgcggtgccccagagtggggtgcctgcactctcagcttccaca
ccctcaccctacccctacatcggacacccccaaggtgagcagcctggccaggcgcctgga
tttccaggaggagccgatgacaggattcgtgagttctcgttagctgggggtatttggcat
ggaagagctgatgggctgcaggtggggcaggatgcacgggttctgggcggggagtga

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