Cervus canadensis (wapiti): 122433142
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Entry
122433142 CDS
T07554
Symbol
WIPI2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04136
Autophagy - other
ccad04140
Autophagy - animal
ccad05010
Alzheimer disease
ccad05014
Amyotrophic lateral sclerosis
ccad05016
Huntington disease
ccad05017
Spinocerebellar ataxia
ccad05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122433142 (WIPI2)
04136 Autophagy - other
122433142 (WIPI2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
122433142 (WIPI2)
05014 Amyotrophic lateral sclerosis
122433142 (WIPI2)
05016 Huntington disease
122433142 (WIPI2)
05017 Spinocerebellar ataxia
122433142 (WIPI2)
05022 Pathways of neurodegeneration - multiple diseases
122433142 (WIPI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122433142 (WIPI2)
03029 Mitochondrial biogenesis [BR:
ccad03029
]
122433142 (WIPI2)
Membrane trafficking [BR:
ccad04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
122433142 (WIPI2)
Mitochondrial biogenesis [BR:
ccad03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122433142 (WIPI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
DUF7165
Beta-prop_RSE1_2nd
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_IFT140_1st
DUF7099
RMC1_N
VID27
Motif
Other DBs
NCBI-GeneID:
122433142
NCBI-ProteinID:
XP_043311688
LinkDB
All DBs
Position
32:complement(32477255..32500869)
Genome browser
AA seq
436 aa
AA seq
DB search
MNLASQSGEAGASQLLFANFNQDVTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPTGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
DGMFLSASSNTETVHIFKLETVKEKPQEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGR
AFATVRLPFCGHKNICALATIQKIPRLLVGASDGYLYMYNLDPQEGGECTLMKQHQLDGS
METTNEILDSTSQDCPLVAQAYSAAVAKGPLAPSSPTALAYTDELGAAGGSGLEDEASAL
RLEDDSEHPPMILRTD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgagtcagagcggtgaggccggcgctagccagctgctcttcgccaacttc
aaccaggacgtcacgtctctagctgttggtagtaaatccgggtataaatttttctccctt
tcttctgtggataaactggaacagatctatgaatgcactgacacggaagacgtgtgcatc
gtggagagattgttctcgagcagcctggtggccatcgtcagcctcaaggctcccaggaag
ctgaaggtttgccactttaagaaggggaccgagatctgcaactacagctactccaacacc
atcctggccgtgaagctcaacaggcagaggctgatcgtgtgcctggaggagtctctctat
atccacaatatccgggacatgaaggtgctgcacaccatccgggagacgcccccaaacccc
actggcttgtgtgcgctgtccatcaacaacgacaactgttacctggcctatccaggcagc
gccaccattggggaggtgcaggtcttcgacaccatcaacctgagagctgcgaacatgatc
ccggctcatgacagcccgttagcagccctggccttcgacgccagcggaaccaaactcgcc
actgcttccgagaaggggaccgtgattagggtattttccattccagaaggacagaaactc
tttgagttccggagaggagtgaagaggtgtgtgagcatctgctccctggccttcagcatg
gatggcatgttcctgtctgcctccagcaacaccgagactgtgcacatcttcaaactcgag
actgtgaaagaaaagcctcaggaggagcccaccacctggaccggctacttcgggaaggtg
ctcatggcgtccaccagctacttgccctcgcaagtgacagagatgttcaaccagggcagg
gccttcgccacggtgcgcctgcctttctgtggccacaagaacatctgtgcgctggccaca
atccagaagattccccgattgctggtgggtgcctcggacgggtacctgtacatgtacaac
ctggacccccaggaaggtggcgaatgcaccctcatgaagcagcaccagttggacggcagc
atggagacaaccaacgagatcctggactccacgtcccaggactgccccctggtggcgcag
gcgtacagcgcagccgtggccaagggcccgctcgcgccttcgtcccccacggcgctggcc
tacacggacgagctgggcgccgcgggcggctcggggctggaggacgaggccagcgccctg
cggctggaggatgacagcgagcacccccccatgattctgcggacggactga
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