Cervus canadensis (wapiti): 122433144
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Entry
122433144 CDS
T07554
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccad01002
]
122433144 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccad04121
]
122433144 (USP42)
Enzymes [BR:
ccad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122433144 (USP42)
Peptidases and inhibitors [BR:
ccad01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122433144 (USP42)
Ubiquitin system [BR:
ccad04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122433144 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
122433144
NCBI-ProteinID:
XP_043311692
LinkDB
All DBs
Position
32:31577996..31617292
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AA seq
1324 aa
AA seq
DB search
MTIVDKASESSDPSTYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVAGA
VVYSSSSVPEKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTC
FANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVI
NEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRS
RVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVL
VHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGE
LPHSAHSPGQSSPRPVISQRVVSSKQAASGFIGPQLPSHMMKNPPHLNGTGPLKETPSSP
LSGPSGNSSVSRTGPVNASPSVQNWSVNRPSVIPEHPKKQKITISIHNKLPVRQGQSQSN
LHSNSLEHPNKPAPSSTITTSSAIQSTSSAPTPPASSKVPKQMAPREACSRPVMNGRSRL
SAGVLVPYGAESSEESDEEAKGLGQENGLSLTESACSPAPDAEDSEASLHELREPVALNG
ATGPDSDPAENGLPSDGAPCPGQPALHSEHPFPKANGLAGKLMPAPLPPLPEDKILETFK
LGSKAKGLAEETRTPGSEERPLEHPEAELEASHSPPDDARDNLESVSSLSSKFKKALPPS
DPSIKPTKEEVSERVLAEPEEAVPSVSTFCNPDKDALGDDQLPAPCDPGNLTDDQSKPSP
DVAGMLPERPQDPVATEAMGRLSPGPSVPSEGDREPEPLGHSGRDRGSDAEGPAKSTGVS
TDEVPSPQLDTITENHPEGPPERSSGERGEDSKAGQKAPEPCPVQEKVSSLRKVDRGHYR
SRRDRSSSGERARESRSRTEVQHRRKRPHREHERPRPERPRLEPCAPAPQPPCLSSLARS
GHHHSRSRGAPDQEWGRYHHAEGEHTWAREKYYPDRLRWERCRYHHDRSPLYPSREPRDW
RPFHAEREYERAGPYGGRPYKDHYRGRKGYELTAKERDRHRFSSPRAGMAHAPPPHPAAK
YAHDRLSFGAEDGSCDLAGRFHEHNIKSRKRRYDSLENDSHVEKKAWRSLQKDPLEEPKV
KKHKKSKKKKKSKDKHRDRDSRHQQDSDLSVAHSDADLHRHKKKKKKKKRHSRKSEDFGR
DSEPRLPKAASCETVDHFRRAEGTFPLADGLPLEGAAPFCEKTKHFRMESREVRCRLSEC
GQGD
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagcttctgaatcttcagacccatcaacctatcagaaccagcct
ggcagttctgaggccgtctcacctggagacatggatgcaggttctgccagctggggtgct
gtgtcttcgttaaatgatgtttcaaatcacacactttctttaggaccagtagctggtgct
gtagtttattcaagttcatctgtacctgaaaaatcaaaaccatcaccacaaaaggatcaa
gccctaggtgatggcattgctcctccacaaaaagttctcttcccatctgagaagatttgt
cttaaatggcaacagactcatagagtaggagccgggctccagaatttgggcaatacctgt
tttgcaaacgcagcactgcagtgtttaacttacacgccacctctcgccaactacatgctt
tcacacgagcactccaagacatgtcatgcagaaggattttgcatgatgtgtacaatgcaa
gcacatatcacccaggcactcagtaatcctggggatgttattaaaccgatgtttgtcatt
aatgagatgcggcgtatagccaggcacttccgctttggaaaccaagaagacgcccacgaa
ttccttcagtacactgttgatgctatgcaaaaagcatgcttgaacggcagcaataaattg
gacagacacacccaggccaccacactcgtctgtcagatatttggaggctacctaagatct
agagtcaaatgtttaaattgcaaaggtgtttcagatacttttgatccatatctcgatata
actttggagataaaggccgctcagagtgtcaacaaggcattggagcagtttgtaaagccg
gaacagctcgacggggaaaactcatacaaatgcagcaagtgtaaaaagatggttccagct
tcaaagagattcactatacatagatcttctaatgttcttacactttctctgaaacgtttt
gcaaattttactggtggaaaaattgctaaggatgtgaaataccctgagtatcttgatatt
cgaccgtacatgtctcaaccaaacggagagccgatcatttatgttttgtatgcagtcctg
gtacacactggttttaattgccatgctggccattacttctgctacataaaagctagcaac
ggcctctggtaccaaatgaacgactccatcgtgtctactagtgatatcagatcggtactg
agccagcaagcttacgtcctcttttatatcaggtcccatgatgtgaaaaacggaggtgaa
cttcctcattccgcccacagccccggccagtcctcaccccgaccggtcatcagtcagcgg
gttgtcagcagcaaacaggcagcctcgggattcattggcccacagctcccctctcacatg
atgaagaacccccctcacctgaacgggacgggaccgctgaaggaaacgccgagcagcccc
ctgtcaggtcccagcggaaattccagtgtcagcaggactggtcctgtgaacgcctccccg
tctgttcagaactggtcagttaacaggccctcagttattccagaacaccccaagaaacag
aaaatcacgatcagtattcacaacaagttacctgtgcgccaaggtcagtctcagtctaac
cttcacagcaattctttggagcaccccaacaagcccgccccctcttctaccattaccact
tcttctgcaatacagtctacctcgagtgcccccacgccgcccgcctctagtaaggtccca
aagcagatggccccgagggaggcctgctccaggcccgtgatgaacggcaggtccaggctg
agcgctggcgtgctggtcccctacggcgccgagtcctccgaggagtctgatgaggaggcc
aagggcctcggtcaggagaatggcctcagcctgaccgagagcgcgtgctcccctgctcca
gacgccgaagatagcgaggcctccctgcacgagctccgagagcccgtggctctaaatggt
gctactggtccggacagcgacccggcggaaaacggcctgccgtcggacggggccccttgc
ccaggccagcccgcgctgcactcagaacacccctttcccaaggcaaacggcctcgctggg
aagttgatgcctgctcctttgccacctcttccagaagacaaaatcttagagaccttcaaa
ctcggcagcaaagccaaaggcttggcagaggagacgaggacacctggctcagaggagagg
cctctggagcatccggaggcagagctggaggccagccactcccctcccgacgacgcccgg
gacaacctggagtctgtctcgagtctcagcagcaaattcaagaaggctttgccgccctcg
gaccccagcatcaaacctaccaaagaagaagtctctgaacgtgttttggcagaacccgag
gaggccgtgccgagtgtcagcaccttttgtaaccccgacaaggatgccctcggggacgat
cagcttccagcaccctgtgaccctgggaacttaacagacgatcagagcaaaccgtccccg
gacgtggcagggatgttaccagagcggccccaggacccggtggctacggaagccatgggg
aggctgagcccgggtccctctgtgccttccgagggcgaccgtgagcccgagcccttgggt
cacagcggtcgggacagaggctcggatgcggagggtcccgctaagagcacaggggtgtct
acagacgaggtgccctctccgcagctagacacgatcacagaaaaccatcccgaggggccc
cctgagcgcagcagcggtgagagaggggaagacagtaaggctgggcagaaggccccggag
ccgtgtccggtccaggagaaggtcagcagcctcagaaaggtcgaccgaggacattaccgc
agccgaagagaccgctcatccagcggcgagcgtgcacgggagagccggagcaggactgag
gtgcaacatcggcggaagcggccccaccgggagcacgagcggccgcggcccgagcggccc
cgactggagccctgcgccccagccccacagcccccctgcctcagctccctggccaggtcg
ggccaccaccactcccggagcaggggcgcccccgaccaggagtggggccgctaccaccac
gctgagggcgagcacacctgggcccgggagaagtactacccggacaggctgcgctgggag
cgctgccggtaccaccacgacaggtcccccctgtaccccagccgggagccccgggactgg
cggcccttccacgctgagcgagagtatgagcgggccgggccctacggtggccggccctac
aaggaccactacagaggccgcaagggctacgagctcacggccaaagagagggaccggcac
cgcttcagcagcccccgggcaggcatggcccatgcgccccctccacaccccgccgccaag
tacgcccacgacaggctcagcttcggggctgaagacggcagctgcgacctggccgggcgg
tttcatgaacacaacattaagtcacggaaacggagatatgatagcctagagaatgacagt
catgtagaaaagaaagcctggagaagcttacagaaggaccctttagaggagcccaaagta
aagaagcacaaaaaatcaaagaaaaagaagaaatccaaagacaaacaccgggaccgagac
tccaggcatcagcaggattcagacctttccgtagcgcactctgacgctgacctccacaga
cacaagaagaagaagaagaaaaagaagagacactcgaggaaatcagaggactttgggcga
gattcagaaccgcgcttgcccaaggcagccagctgtgagactgtggaccatttccggaga
gccgagggcaccttcccccttgcagacggcctgccgctggagggcgcggcacctttctgt
gagaaaaccaaacacttcaggatggagagccgggaggtcaggtgtcgtctgtccgagtgc
ggccagggtgattga
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