Cervus canadensis (wapiti): 122433152
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Entry
122433152 CDS
T07554
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccad04121
]
122433152 (TRIM56)
Enzymes [BR:
ccad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122433152 (TRIM56)
Ubiquitin system [BR:
ccad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122433152 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-C3HC4_4
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
122433152
NCBI-ProteinID:
XP_043311705
LinkDB
All DBs
Position
32:complement(29182772..29191783)
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AA seq
755 aa
AA seq
DB search
MVSQGSSPSLLEALSSDFLACKICLEQLQVPKTLPCLHTYCQDCLAQLAEGGRLRCPECR
ESVPVPPAGVAAFKTNFFVNGLLDLVKARAGGDLRAGKPACALCPLMGGASAGGPATARC
LDCADDLCQACADGHRCTRQTHSHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
CQPCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLEELLAGVDNNLAELEATRLAEKEA
LARLREQAAKVVMQVEEAAEGVLRALLAQKQEVLGQLRAHVEAAEEAARERLGELEGREQ
VAREAAAFARRVLSLGREAEILSLEGAIAQRLRQLQDCPWVPGPAPCQLPQLELHPGLLD
KNCHLLRLSFEEQQLQKDSRKDGARSPGGDATQPQSSDGVQTPNQDRAQTPQEDEAQLLK
AERAETPQEDGAKTPKEGRAQTPQEDGGTQAARGGRCNKKRKFKGRLKSVSREPSPAPGP
NLEGSGLLPRPIFFCSFPTRMPGDKRAPRITGLCPFGSREILVADEQNRALKRFSLNGDY
RGAVPVPEGCSPCSVAALQDAVAFSAAARLYLINHNGEVQWRRALSLCQASHAVAAMPSG
DRVAVSVSGHVEVYNMEGSLATRFIPGGKANRGLRALVFLTTSPQGHFVGSDWQQNSLVV
CDGLGQVVGEYRGPGLHGCQPGSISVDKKGYIFLTLREVNKVVILDPKGALLGDFLTAYH
GLEKPRVTTMVDGRYLVVSLSNGTIHVFRVRPLDS
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccagggctcctcaccctccctcctggaggccctgagcagcgacttcctggcc
tgtaaaatctgcctggagcaactgcaggtgcccaaaacactcccctgcctgcacacctac
tgccaggactgcctggcacagctggccgagggcggccgcctccgatgccccgagtgccgc
gagtccgtgcccgtgccgcccgccggcgtggccgccttcaagaccaacttctttgtcaac
ggactcctggatttggtgaaggcccgggccggcggcgacctgcgggcggggaagccggcc
tgtgccctgtgccccctgatggggggcgccagcgccggggggccggccactgcccgctgc
ctggactgcgccgatgacctgtgccaggcctgtgccgacgggcaccggtgcacccggcag
acccacagccaccgggtggtggacctggtgggctaccgggcggggtggtacgatgaggag
gcccgggagcgccaggcggcccagtgtccccagcaccccggggaggccctgcgcttcctg
tgccagccctgctcccagctgctgtgccgagagtgtcgcctggaccctcacctggaccac
ccctgcctgcccctggctgaggctgttcgcgcccggaggccaggcctcgaggagctgctg
gccggcgtggacaacaacctggccgagctggaggccacccggctggccgaaaaggaagcc
ttggcccggctgcgggagcaggcggccaaggtagtcatgcaggtggaggaggcggccgag
ggggtcctcagggccctcctggcccagaagcaggaggtgctcgggcagctgcgggcccac
gtggaggctgccgaggaggctgctcgggagcggctgggggagctggagggccgggagcag
gtggccagggaggcggccgcctttgcccgtcgggtgctcagcctggggcgcgaggctgag
atcctctcgctggagggggcgatcgcccagcggctccgacagctgcaagactgtccctgg
gtgcctgggcctgctccctgccagctgccccagctggaactgcatcctgggctcctggac
aagaactgccacctgctgaggctctcctttgaggagcagcagctgcagaaggacagcagg
aaggatggagcccgaagcccgggaggtgacgcaacccagccccagagcagcgatggagtt
cagaccccaaatcaggacagagcgcagacaccccaagaagatgaagcccagctcctcaag
gcggagagagctgagacgccccaggaagatggagccaagaccccaaaagagggcagagcc
cagacaccccaagaagatggaggaacccaggctgcgaggggcggcagatgcaacaagaag
aggaagttcaaaggcagactcaagtccgtctcccgggagcccagccccgcccccgggcca
aacctggagggctctggcctcctgcccaggcccatctttttctgcagcttccccacgcgg
atgccgggggacaagcgcgccccccggatcactgggctctgtccctttggctcccgggag
atcctggtggcggatgagcagaacagggccctgaagcgcttctctctcaatggcgactac
aggggcgcggtgcccgtgcccgagggctgctccccatgcagcgtggccgccctgcaggat
gccgtggccttctcagcggccgcgcggctctatctcatcaaccacaacggcgaggtgcag
tggcgccgggcgctgagcctctgccaggccagccacgccgtggccgccatgccgagcggg
gaccgggtggcggtcagcgtatccggccacgtggaggtgtacaacatggaaggcagcctg
gccacgcgattcatccccgggggcaaggccaaccggggcctgcgggcgctggtgttcctg
accaccagcccccagggccatttcgtagggtctgattggcagcagaatagcttggtggtc
tgtgatgggctgggtcaggtggttggggagtaccggggacccggcctgcacggctgccag
ccgggctccatatccgtggataagaaaggctacatctttctgacccttcgcgaggtcaac
aaggtagtgatcctcgatccaaagggcgcgctgcttggcgacttcctgacggcctatcac
ggcctggaaaagccccgggtgaccaccatggtggacggcaggtacctggttgtgtccctc
agtaacgggaccatccacgtctttcgggtccgccctcttgacagttaa
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