Cervus canadensis (wapiti): 122433183
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Entry
122433183 CDS
T07554
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122433183 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122433183 (RABGEF1)
Membrane trafficking [BR:
ccad04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122433183 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
122433183 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CID_GANP
SSTK-IP
Motif
Other DBs
NCBI-GeneID:
122433183
NCBI-ProteinID:
XP_043311779
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All DBs
Position
32:21961727..22011917
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AA seq
492 aa
AA seq
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MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHRARQKQIQEDWELAER
LQREEEEAFASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRVGAKKAEIQE
AKAPSPSINRQTSIETDRVSKEFIEFLKTFHKTGQEIYKQTKLFLEAMHYKRDLSIEEQS
ECTQDFYQNVAERMQTRGKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQ
KRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSKHIF
NAIKITKSEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL
CCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQESESWSPDACLGVKQMYKNLDLLSQ
LNERQERIMNEAKKLEKDLIDWTDGIAKEVQDIVEKYPLEIRPPNQSVAAIDSENVENDK
LPPPLQPQVYAG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagccttaagtctgaacgccgaggaattcatgtggatcaatcagaactcctatgcaag
aaaggatgtggttactacggcaaccctgcttggcagggtttctgctccaagtgctggagg
gaggagtaccacagagccaggcagaagcagattcaggaggactgggagctggcagagcgt
ctgcagcgggaggaagaagaggcctttgccagcagtcagagcagccaaggggcccaatcc
ctcacattttccaagtttgaagagaagaaaaccaatgagaagacccgcaaggttaccaca
gtgaagaaattcttcagtgcttcatccagggttggagcaaagaaggcagaaattcaggaa
gcaaaagctcccagtccttccataaaccggcaaaccagcattgaaacggatagagtgtct
aaagagttcatagaatttctcaagaccttccacaagacaggccaagaaatctataagcag
accaagctgtttttggaagcaatgcattacaaaagggacttaagcattgaggagcagtca
gaatgtactcaggatttttaccagaatgtggctgaaagaatgcagactcgtggaaaagtg
cctccagaaagagttgagaagataatggatcagattgaaaagtacatcatgactcgtctc
tataaatacgtgttctgcccagaaactactgatgatgagaagaaagatcttgctattcag
aagaggatcagagccctgcactgggttacacctcagatgctttgtgtccctgttaatgaa
gaaattccagaagtgtccgacatggtggtgaaagcaattacagatatcattgagatggat
tcgaagcgtgtgccccgggataagctggcctgcatcaccaggtgcagcaagcacatcttc
aatgccatcaagatcaccaagagcgagccggcttcagccgatgacttcttacccacgctc
atctacattgtcttgaagggcaaccccccacgccttcagtccaacattcagtacatcacc
cgcttctgcaacccaagccgactgatgacgggcgaggatggctactatttcaccaatctg
tgctgtgccgtggctttcattgagaaattagatgctcagtctttgaatttaagtcaggaa
gattttgatcgatacatgtctggccagacttctcccaggaagcaggaatctgagagttgg
tctcctgatgcttgcttaggtgtgaagcagatgtacaagaatttggacctcctgtctcag
ttgaatgaacgacaggaaaggattatgaatgaagctaagaaacttgagaaagacctcata
gattggacggatggaatcgcaaaagaggttcaagacattgttgagaaatacccacttgaa
attagacccccaaatcagtctgtagcagctattgactctgaaaatgttgaaaatgataaa
cttcctccaccgttgcaacctcaagtttatgcaggatga
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