Cervus canadensis (wapiti): 122433226
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Entry
122433226 CDS
T07554
Symbol
ABCA3
Name
(RefSeq) phospholipid-transporting ATPase ABCA3 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122433226 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccad02000
]
122433226 (ABCA3)
Transporters [BR:
ccad02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
122433226 (ABCA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_22
AAA_15
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-GeneID:
122433226
NCBI-ProteinID:
XP_043311868
LinkDB
All DBs
Position
32:37982468..38023386
Genome browser
AA seq
1704 aa
AA seq
DB search
MAVLRQLALLLWKNYSLQKRKVLVTLLELFLPLLFSGILIWLRLKIQSENVPNATLYPSQ
SIRELPLFFSFPPPGATWELAYIPSQSEAVRTVVENVQRALVINLRARGFASEKDFEDYI
RYDNRSANVLAALVFEHTFNHSRDPLPLAVRYHLRFSYTRRNYMWTQTGSFFLKETEGWH
TTSLFPLFPNPGPREPTSPDGGEPGYIREGFLAVQHAVDRAIMHYHANASAHQLFEKLTV
IAKRFPYPPFISDPFLVAIQYQLPLLLMMSFTYTSLSIIRAIVQEKEKKLKEYMRMMGLS
SWLLWTAWFLLFFLLLLVAVSFMTLLFCVKVKKDVAVLAHSDPALVLVFLACFAVSSISF
SFMVSTFFSKANMAAAIGGFLYFFSYIPYFFVAPRYNWMTLSQKLFSCLLSNVAMAMGAQ
LIGKFEAKGTGIQWRDLLSPVNVDDDFTFGQVLGMLLLDSVLYGLVTWYVEAVLPGQFGV
PQPWYFFILPSYWCGRPRTALGKEEEDYDPEKVLRTEYFEAEPEDLVAGIKIKHVTKVFR
VGNKGKAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGRAYISGYEVSQD
MDQIRKSLGLCPQHDVLFDNLTVAEHLYFYAQLKGLPRQKCPEEVKRMLHVLGLEEKRDS
RSKFLSGGMRRKLSIGIALIAGSKVLMLDEPTSGVDAISRRAIWDLLQQHKSDRTILLTT
HFMDEADLLGDRIAIMAKGELQCCGSSLFLKEKYGAGYHMTLVKEPHCNPEGISRLVQHH
VPNATLESSAGAELSFILPKESTHRFESLFAKLEKKQKELGIASFGASVTTMEEVFLRVG
KLVDTSMDIQAIQLPALQYQHERRASDWAVDGHLCGTMDPTDGVGALIEEECTAVRLNTG
LALHCQQFWAMFLKKATYSWREWKVVAAQVLVPVTCLTLALLAINYSSEIFDDPLLKLTL
GEYGRTVVPFSVPGTSRLDQQLSEHLKDMLQAEGQEPREVLGDLEEFLIFRASVEGGGFN
ERCLVAASFRDTGEHTVVTALFNNQAYHSPATALAVVDNLLFKLLCGPRASITVSNFPQP
RSALQAAKDQFNEGRKGFDIALNLLFAMAFLASTFSILAVSERAVQAKHVQFVSGVHVAT
FWLSALLWDLLSFLVPSLLLLVVFKAFDVHAFTRDGHVADALLLLTLYGWAIIPLMYLMS
FFFSGAATAYTRLTIFNILSGIATFLVVTIMRIPAVKLEELSRTLDRVFLVLPNHCLGMA
VSNFYQNYETRRYCTSSDVAAHYCRKYNIQYQENFYAWSTPGVGRFVTSMAASGFAYLTL
LFLVEADLLWRLKTCLCAFRRRRALTEVYTRTAALPEDQDVMDERNRVLSPSLDSLLDTP
LIIKELSKVYEHRAPLLAVDKVSLAVQKGECFGLLGFNGAGKTTTFKMLTGEETITCGDA
FVGGYSISSDIGKVRQRIGYCPQFDALLDHMTGRETLVMFARLRGIPERHIGACVENTLR
GLLLEPHANKLVRTYSGGNKRKLSTGIALLGEPAVIFLDEPSTGMDPVARRLLWDTVARA
RESGKAIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLRAKIRSDGQ
QETLEEFKAFVGLTFPGSVLEDEHQGMVHYHLPGDDLSWAKVFGVLEKAKEKYGVDDYSV
SQTSLEQVFLSFAHLQPSTEDAGP
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctcaggcagctggcgctgctgctctggaagaactatagtctacagaagcgg
aaggtgctggtgaccctcttggagctctttctgcccctgctgttctctgggatcctgatc
tggctccgcctgaagatccagtcagagaacgtgcccaatgccaccctctaccccagccag
tccatccgagagctgcccctcttcttcagcttccctcccccgggggccacctgggagctg
gcctacatcccatcccaaagtgaggccgtgcgcacagtggtggagaacgtgcagagggcg
ctggtgatcaacctgcgagctcgcggcttcgcctccgagaaggacttcgaggactacatc
agatacgacaaccgctctgccaacgtgctggccgccctggtgttcgagcacaccttcaac
cacagccgggaccccctcccgctggcggtgagataccacttacgcttcagttacacgcga
agaaactacatgtggactcagacaggctcctttttcctgaaagagacagagggatggcac
accacttccctttttccactcttcccaaacccaggacccagggagcccacgtcccctgac
ggcggagaacctggttatatccgcgagggcttcctggccgtgcagcatgcagtggacagg
gccatcatgcattaccatgccaacgcctccgcgcaccagctgttcgagaagctcactgtg
atcgccaagcggttcccttacccgcctttcatctccgaccccttcctggtcgccatccag
taccagcttccactgctgctcatgatgagcttcacctacacctccctcagcatcatccgg
gccatcgtgcaggagaaggagaagaagctgaaggagtacatgcgtatgatggggctcagc
agctggctgctctggaccgcgtggttcctcctcttcttcctcctcctcctcgtcgccgtc
tccttcatgactctgctcttctgcgtcaaggtgaagaaggatgtggcggtgctcgcgcac
agcgaccccgcgctggtgctggtcttcctggcctgctttgccgtctcctccatctccttc
agcttcatggtcagcaccttcttcagcaaagccaacatggcagcggccatcggcggtttc
ctctacttcttctcctacatcccctacttcttcgtcgctcctcgctacaactggatgacg
ctgagccagaagctcttctcctgcctcctgtccaacgtcgccatggcgatgggagcccag
ctcatagggaaatttgaagccaaaggcacaggcatccagtggcgagacctcctgagtccc
gtcaacgtggatgatgacttcaccttcgggcaggtgctgggcatgctgctgctggactcc
gtcctgtacgggctggtcacctggtacgtggaggctgtgctcccgggccagttcggcgtg
ccccagccctggtacttcttcatcctgccttcgtactggtgcggacgcccaaggacggcg
ctcgggaaagaagaggaggactacgaccctgagaaagtactcaggactgagtactttgaa
gctgagcccgaggacctggtggccgggatcaagatcaagcacgtgaccaaggtgtttaga
gtggggaacaagggcaaggcggccgtcagagacctgaacctgaacctgtacgaaggccag
atcaccgtcctgctgggccacaacggcgcggggaagaccaccacgctctccatgctcacg
ggtctcttccccccgaccagcggacgagcgtacatcagcgggtacgaagtctcgcaggac
atggatcagatccggaagagcctgggcctgtgcccacagcacgacgtcttgtttgacaac
ctgaccgtcgccgagcacctgtacttctatgctcagctgaaaggcttgccgcgtcagaag
tgccctgaggaggtcaaacgcatgctgcacgtgctcgggctggaggagaagcgggactcc
cgaagcaagtttctgagtggcgggatgcggcgcaagctctccatcggcatcgccctcatc
gcgggctccaaggtgctgatgctggacgagcccacctcgggcgtggacgccatctccagg
agggccatctgggaccttctgcagcagcacaagagcgaccgcaccatcctgctgaccacc
cacttcatggacgaggccgacctgctgggggaccgcatcgctatcatggccaagggggag
ctgcagtgctgcgggtcgtcgctgttcctcaaggagaaatatggagcaggctaccacatg
acgctggtgaaggagcctcactgcaaccctgagggcatctcccggctggtccagcaccac
gtccccaacgccaccctggagagcagcgccggggcagagctgtcgttcattcttcccaag
gagagcacacacaggtttgaaagtctttttgctaaactggagaagaagcagaaggagttg
ggcatcgccagcttcggggcctctgtcaccaccatggaggaggtcttcctccgggttggc
aagctggtggacaccagcatggacatccaggccatccagctccctgccctgcagtaccag
cacgagaggcgggccagcgactgggctgtggacggccacctgtgcgggaccatggaccca
accgacggcgtcggcgcgctgattgaggaggagtgcaccgccgtcaggctcaacaccggg
ctggccctccactgccagcagttctgggccatgttcctgaagaaggccacctacagctgg
cgcgagtggaaggtggtggcggcccaggtcctggtgcctgtgacgtgcctcaccctggcc
ctcctggccatcaactactcctccgagatcttcgacgaccccctgctgaagctgaccctg
ggcgagtacggccgcaccgtcgtgcccttctcggtccccgggacctctcggctggatcag
cagctgtcggagcatctgaaagacatgctgcaggccgagggccaggagcctcgagaggtg
ctgggtgacctggaggagttcctgattttcagggcctcagtggaggggggcggcttcaac
gagcggtgcctggtggcagcatccttcagagacacgggcgagcacacggtcgtcactgcc
ctgttcaacaaccaggcgtaccactcccccgccaccgcgctggccgtcgtggacaacctc
ctgttcaagctgctgtgtggcccccgggcctccatcacggtgtccaacttcccccagccc
cggagtgccctgcaggctgccaaggaccagttcaatgagggccggaaaggcttcgacatc
gccctcaacttgctgttcgccatggcattcctggccagcacgttctccatcctagcagtc
agcgagagggccgtccaagccaagcatgtgcagttcgtgagcggcgtccacgtggctact
ttctggctctcggctctgctgtgggacctcctgtccttcctcgtccccagtctgctgctg
ctggtagtgttcaaggccttcgacgtacatgccttcacgcgggacggacacgtggccgac
gccctgctgctgctcacgctctacggctgggccatcatccccctcatgtacctgatgagc
ttctttttctccggggcggccaccgcctacacgcggctgaccatattcaacatcctgtcg
ggcatcgccaccttcctcgttgtcaccatcatgcgcatcccagcagtcaagttagaagaa
ctttccagaaccctggaccgcgtgttcctggtgcttcccaaccactgcttggggatggcg
gtgagcaacttctaccagaactacgagaccaggcggtactgcacctcctccgacgtggca
gcccactactgccggaaatacaacatccagtaccaggagaacttctacgcgtggagcacc
ccgggggtcggcaggttcgtgacctccatggccgcttcagggtttgcctacctcaccctg
ctcttccttgtggaggccgacctgctatggaggctgaagacctgcctgtgtgccttccgg
aggaggcgggcgctgacagaagtgtacacccggacggcggcgctccctgaagaccaggat
gtgatggacgaaaggaaccgcgtcctgtcccccagcctggactccctgctggacacgcct
ctgatcatcaaggagctctccaaggtgtacgagcaccgggctccgctcctcgccgtggac
aaggtgtcccttgcggtccagaaaggggagtgcttcggtttgctgggcttcaacggagcc
gggaaaaccacgactttcaaaatgctgaccggggaggagaccatcacctgtggggacgcc
tttgttgggggctacagcatcagctctgacatcgggaaggtgcggcagcgaatcggctac
tgtccccagttcgatgccctactggaccacatgacaggccgggagacactggtcatgttc
gcccggctccggggcatccccgagcgccacattggcgcatgcgtagagaacacgctgcgg
ggtctgcttctggaaccgcatgccaacaagctggtcaggacgtacagcggtggcaacaag
cgcaagctcagcactggcattgccctcctgggggagcccgcggtcatcttcctggacgag
ccgtccactggcatggaccctgtggcccggcgtctgctctgggacaccgtggcacgggcc
cgagagtccggcaaggccatcgtcatcacctcccacagcatggaggagtgtgaagccttg
tgcacccggctggccatcatggtgcagggtcagttcaagtgcctgggcagcccacagcac
ctcaagagcaagtttggcagcggctactccctacgggccaagatccggagtgacgggcag
caggagacactggaggagttcaaggcgttcgtgggcctgaccttcccaggcagcgtcctg
gaggatgagcaccaagggatggtccattaccacctgcccggcgatgacctcagctgggcg
aaggtatttggcgttctggagaaggccaaggagaagtacggggtggatgactactccgtg
agccagacctctctggagcaggtcttcctgagcttcgcccacctgcagccatccaccgag
gacgcgggtccgtga
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integrated database retrieval system
