Cervus canadensis (wapiti): 122433481
Help
Entry
122433481 CDS
T07554
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122433481 (TNRC6A)
03036 Chromosome and associated proteins [BR:
ccad03036
]
122433481 (TNRC6A)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122433481 (TNRC6A)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122433481 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
122433481
NCBI-ProteinID:
XP_043312416
LinkDB
All DBs
Position
32:16365634..16461956
Genome browser
AA seq
1948 aa
AA seq
DB search
MRELEAKATKDVERNLSRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIK
PSVSQPQPANSNNGTSTATSTNNNAKRATANNQQPQPQPQPQQQPQQPPQPQPPPQALPR
YPREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLSSQSESSALTNQQPQNNGEVQI
SKNQSDINHNTSGSHYENSERGPVSSTSDSSTNCKNAVVNDSPEKEAWPSVPGSDPELVS
ECMDADSASSSESERHITIMASGSAGGENDGLRNSTGLGSQNKFVVGSSSNNVGHGSSTG
PWGFSHGAIISTCQVSVDAPESKSESSNNRMNAWGTVSSSSNGGLNPSTLNSASNHGAWP
VLENSGLALKGPVGSGSSGINIQCSTLGQMPNNQSINSKVGGASTHGTWGSLQETCESEV
SGTQKVSFSGQPQNITTEMTGPNNTTNFMTSSLPNSGSVQNNELPSNTGAWRVSTMNHPQ
IQAPSVVNGTSLSHLSNGESKSGGSYGTTWGAYGSNYSGDKCSSPNGQANGDTVNATLMQ
PGINGPVGTNFQVNTNKGGGVWESGAVNSQSASWGNGANSGGSRRGWGTPAQNTGTNIPS
VEWNKLPSNQHSNDSANGNGKKFTNGWKSTEEEDQGSATSQTNEQNSVWAKTGGAVESEG
STESTGRLEEKGTGESQSRDRRKMDQHTLLQSIVNRTDLDPRVLSNSGWGQTPIKQNTAW
DTETSPRGERKTDNGTEAWGSSATQTFNSGACVDKTSPSSNDTSSVSGWGDPKPALRWGD
SKGSSCQGGWEDDSAATGMVKSNQWGNCKEEKSAWNDSQKNKQGWGDGQKSNQGWSVSAS
DNWGETSRSNHWGEANKKSSSGGSDSDRSVSGWNELGKTSSFTWGNNINPNNSSGWDESS
KPNPSQGWGDPPKSNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATGKPPGTGWLGGP
MPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNVPNGSSRSD
QQAQVHQLLPSAGAISNKEASSGSGWGEPWGETSTPATTVDNGTSAWGKPVDSGPSWGEP
IAAASSTSTWGSSSVGPQTLSKSGPKSMQDGWCGDDMPLPGNRPTGWEEEEDVEIGMWNS
NSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERGMMKGGNKQEEAWINPFVKQFSNISFS
RDSPEENVQSNKMDLSGGMLQDKRMEIDKHSLNIGDYNRTVGKGPGSRPQISKESSMERS
PYFDKDGIVADESQNMQFMSSQSMKLPPSNSALPNQALGSIAGLGMQNLNSVRQNGNPSM
FGVGNTAAQPRGMQQPPAQPLSSSQPNLRAQVPPPLLSPQVPVSLLKYAPNNGGLNPLFG
PQQVAMLNQLSQLNQLSQISQLQRLLAQQQRAQSQRSVPSGNRQQQDQQGRPLSVQQQMM
QQSRQLDPNLLVKQQTPPSQQQSLHQPAMKSFLENVMPHTTPELQKGPSPINAFSNFPIG
LNSNLNVNMDMSSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSGFRLEESPFVPY
DYMNSSTSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYVTP
GSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNHSVPLSSTAQSASA
RNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQKPPLSSWDNSPLRV
GGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPLITFHLNL
PHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQSQSLTPSPSWQS
LGSSQSRLGSLDCSHSFSSRTDLNHWNGAGLSGTNCGDLHGTSLWGTPHYSTSLWGPPSS
SDPRGISSPSPINAFLSVDHLGGGGESM
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattggaagctaaagctaccaaagacgtagaaaggaatcttagcagggattta
gtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaagacgacaagaaaaag
aaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtgccagaacagataaag
cccagtgtaagccagcctcagcctgccaactctaataacggcacttccacagcaaccagc
actaataataatgccaagcgagccacagccaacaatcagcagccgcagccgcagccacag
ccgcagcagcaaccgcagcagccgccgcagccgcagccgccaccacaggccttgcctcgg
tacccccgggaagttccacctcgatttcgccaccaggagcataagcagcttctaaagagg
ggtcagcattttcccgtcatagcagcaaacctgggatctgctgttaaagtgttaagcagc
cagtcagaaagcagtgctttaacaaatcaacagccacaaaataacggagaggtgcagatc
agcaaaaaccagtcagatataaaccacaatacttcaggatcccattatgaaaattcagag
cggggacctgtgtcttctacaagtgactctagtacaaactgtaagaatgctgttgtgaac
gactcccctgaaaaagaagcatggccctcggtccctggcagtgatccggagttggtttca
gaatgtatggatgctgattctgcctccagttctgaatcagagcgacacatcactatcatg
gcttcagggagcgcaggcggtgaaaacgatggccttcggaacagcactggacttggatcc
caaaacaagtttgtggttggtagcagcagcaataatgtgggccatggaagcagtactggg
ccgtggggtttttcccacggagccataataagcacatgtcaggtgtctgtggatgctcct
gaaagcaaatcagaaagtagcaacaatagaatgaatgcttggggcactgtaagttcttca
tcaaatggagggttaaatccaagcactttgaattcagctagcaaccatggtgcctggcca
gtattagagaacagcggacttgccctaaaagggcctgtagggagcggtagttctggcatc
aatattcagtgcagtaccttaggccagatgcctaacaatcagagtattaactctaaagtg
ggtggtgcttccacccatggtacctggggaagccttcaggaaacttgtgaatctgaagta
agtggtacacagaaggtttcattcagtggtcaacctcaaaatattaccactgaaatgact
ggaccaaataacactactaactttatgacctctagtttaccaaactccggttcagtacag
aataatgaactgcctagtaatacaggggcctggcgtgtgagcacaatgaatcatcctcag
atacaggctccctcggttgtaaacggcacttccctttctcaccttagcaatggagagtca
aaaagtggaggctcttacggtactacatggggtgcctatggttctaattactctggagac
aaatgttcaagccctaatggccaagctaatggtgacactgtgaacgcaactctaatgcag
cctggcataaacgggcctgtgggcactaactttcaagttaacacaaataaaggaggaggc
gtgtgggagtctggagcagtgaattcccagagtgcatcctggggaaatggtgcaaattct
ggaggaagtcgaagaggatggggaactcctgcacaaaacactggcactaatatacccagc
gtggaatggaacaaactgcctagcaatcagcattccaatgacagtgcaaacggcaacggt
aagaagtttacaaacggatggaaatctactgaggaagaggatcagggttctgccacatct
cagacaaatgagcaaaacagtgtgtgggccaaaacgggaggtgcagtggagagtgaaggt
agcacagaaagcactggacgcctcgaggagaaagggactggggagagtcagagtagagac
agaaggaagatggatcagcacacgttactccaaagcattgtgaacagaacggacttagat
ccacgtgtcctgtccaactctggttggggacagactcctattaagcagaatactgcctgg
gataccgaaacatcacctagaggggagagaaagactgacaatgggacagaggcctgggga
agctctgcaacacagacttttaactcaggggcatgtgtagataagactagccctagtagt
aatgatacctcatctgtatcggggtggggagatcccaaacctgctctgaggtggggagat
tccaaaggctcaagctgccaggggggatgggaagatgactctgctgctacaggaatggtc
aagagcaatcagtgggggaactgcaaagaagagaagtccgcatggaatgattcgcaaaag
aacaaacagggatggggtgatgggcaaaagtcaaaccaagggtggtctgtctctgccagt
gataactggggagaaacttcaaggagtaaccattggggtgaggctaacaagaagtctagc
tcaggaggtagtgacagtgataggtctgtttctggttggaacgaactcggtaaaactagt
tcttttacatggggaaataacattaatccaaataattcatcaggctgggacgaatcttct
aaaccgaatccttcccagggatggggagaccctccaaagtctaatcagtctctaggttgg
ggagattcatcaaagccagtcagttctccagactggaacaagcaacaagacattgtcgga
tcttggggcatcccgccagcaacaggcaaacctcctggtacaggctggctgggaggacct
atgccagccccagcgaaagaggaagaacccacgggctgggaggagccatccccagaatcc
atacgtcgcaaaatggagattgacgacgggacttcagcttggggagatcccagcaaatac
aactacaaaaatgtgaacatgtggaacaaaaatgtcccaaatggcagcagccgctcagac
cagcaagcacaggtacaccagttgctaccgtctgcaggtgccatctcaaacaaagaggca
agcagtggctccggctggggtgagccctggggggagacttcaactccagccacaactgtg
gataatggtacttcagcctggggtaaacccgtagacagtgggcctagctggggcgaaccc
attgctgcggcatccagcacatccacgtggggttccagctctgttggtccacaaacatta
agcaaatctgggccaaaatctatgcaagacggctggtgtggtgatgatatgcccctgcct
ggaaatcgccccactggctgggaagaggaagaggatgtagagattggaatgtggaatagt
aattcatctcaagagcttaattcatctttaaattggccaccatatacaaagaaaatgtct
tcgaagggtctgagtggcaaaaaaaggagaagggaaaggggaatgatgaaaggtggaaac
aaacaagaagaagcatggataaatccatttgttaaacagttttcaaatatcagtttttcg
agagactcgccagaagaaaatgtacagagcaataagatggacctttctggaggaatgtta
caagacaaacgaatggagatagataaacatagcctaaatattggtgattacaatcgaacg
gtcgggaaaggccctggttctcggcctcagatttccaaagagtcttccatggagcgcagt
ccttattttgataaggatggcattgtagcagatgaatcccaaaacatgcagtttatgtcc
agtcaaagcatgaagcttcccccttcaaatagtgcactacctaaccaggccctgggctcc
atagcagggctgggtatgcaaaacttgaattctgttagacagaatggcaatcccagtatg
ttcggtgttgggaacacagcagcacaaccccggggcatgcagcagcctccagcacaacct
ctcagctcatctcagcctaatctccgtgctcaagtgcctcctccattactctcccctcag
gttccagtttcattgctgaagtatgcaccaaacaacggtggcctgaatccgctctttggc
cctcaacaggtagccatgctgaaccagctatcccaactaaaccagctttctcagatctcc
cagttacagcgattgttagcgcagcagcaaagggcgcagagtcagagaagcgtgccttct
gggaaccggcagcagcaagaccagcagggtcgacctcttagcgtgcagcagcagatgatg
caacaatctcgtcaacttgatccaaacctgttggtgaagcaacaaactccgccatctcag
caacagtcactccatcagccagccatgaagtctttccttgaaaatgtcatgccccacacg
acacctgagctgcaaaaagggccatcaccaataaatgctttcagcaacttccctataggc
ttgaactcaaacttgaatgtaaatatggatatgagcagtattaaagagccacagtcaaga
ctaaggaagtggactacagtggacagcatttctgtgaatacatctttggatcaaaactcc
agcaaacatggtgctatttcaagtggtttcaggctggaagagtctccgtttgttccctat
gactatatgaacagcagtacttcaccagccagtcctccaggttcaataggagatggctgg
ccacgtgccaaatcgcctaacggctctagcagtgttaattggccaccagaatttcgccct
ggtgaaccatggaaaggttatccaaacattgaccctgaaactgacccttacgtcactcct
ggcagtgtcataaacaatctttcaattaatactgtgcgggaagttgaccacctcagggac
aggaacagtgggtcgtcctcatccttgaacaccacgctgccttcaactagtgcctggtca
tccattcgtgcctccaaccacagcgttcccctcagcagcacagcacagagcgcttcagcc
agaaatagtgattccaaattgacatggtcccctggttcagttacaaacacctctctggct
catgagctgtggaaggtccctctgccacctaaaaacatcactgctccgtcccgcccacct
ccgggactgactggtcagaagccacccttgtcttcgtgggataattctccccttcgagta
ggtggaggatggggaaattctgacgccaggtataccccaggttccagctggggtgagagc
agctcagggagaataacaaattggcttgttctaaaaaaccttacacctcagattgatggc
tcaactctgcgtactctgtgcatgcagcatggcccactgataacattccacctgaacctc
ccacatggaaacgctttggtccgttacagttcaaaagaagaggtagtgaaggcacaaaag
tctctgcacatgtgtgtactggggaacactactattcttgctgagtttgccagtgaagag
gagatcagtcgtttctttgcacaaagtcagtctctgaccccttctcccagctggcagtct
ctcgggtccagccagagccggctgggctccctcgactgttcccactcattctccagccgg
accgatctcaatcactggaatggtgctgggctgtcgggaactaactgtggagaccttcat
ggcacttccctctgggggaccccacattattccacaagcctgtggggtcctcccagcagc
agcgacccccggggaattagcagcccatcccccattaatgcttttctttctgttgaccac
ctgggtgggggtggagagtccatgtaa
DBGET
integrated database retrieval system
