Cervus canadensis (wapiti): 122433635
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Entry
122433635 CDS
T07554
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122433635 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122433635 (GSPT1)
03012 Translation factors [BR:
ccad03012
]
122433635 (GSPT1)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122433635 (GSPT1)
Translation factors [BR:
ccad03012
]
Eukaryotic type
Release factors
122433635 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
122433635
NCBI-ProteinID:
XP_043312681
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All DBs
Position
32:3759703..3791451
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AA seq
638 aa
AA seq
DB search
MDPGSGGGGGGGGGGGSSSSSDSAPDCWDQADMEAPGPGPCGGAGGPLAAAAAEAQREHL
SAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPSQSPASTAGAAANNHGAGSGAGGPSAPV
ESSQEEQSLLCEGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEAEPDGGSLGDGR
PTEESAQEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMV
DKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETDKKHFTILDAPG
HKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINK
MDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIG
LPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNV
EVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIE
HKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAG
TICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggcagtggtggcggtggcggcggcggcggcggcggcgggagcagcagcagc
agcgactcggcgcccgactgctgggaccaggcggacatggaagcccccgggccgggcccg
tgcggcggcgccggcggccccttggcggcggcggcggccgaggcccagcgtgagcacctc
agcgcggccttcagccggcaactcaacgtcaacgccaagcccttcgtgcccaacgtccac
gccgccgagttcgtgccgtccttcctgcggggcccgtctcagtcgccggcatccacagct
ggcgccgccgccaacaaccacggagccggcagcggcgcgggaggcccttcggcacctgtg
gagtcttctcaagaggaacagtcattgttgtgtgaaggttcaaattcagctgttagcatg
gaactttcagaacctattgtagaaaatggggagacagagatgtccccagaagaatcatgg
gagcacaaagaagaaataagtgaagccgagccagatggtggttccttgggagatggaagg
cccacagaggaaagtgcccaggaaatgatggaggaggaagaggaaataccaaaacctaaa
tctgtggttgcaccgccaggtgctcccaagaaagaacacgtaaatgtggtattcattggg
catgtagatgctggcaagtcaaccatcggaggacaaataatgtatttgactggaatggtt
gacaaaaggacacttgagaaatatgaaagagaagctaaagaaaaaaacagagaaacctgg
tacttatcttgggccttagacacaaatcaggaagaaagagacaagggtaaaacagtagaa
gtgggtcgtgcctattttgaaacggataagaagcattttacaattctagatgcccctggc
cacaagagttttgtcccaaatatgattggtggtgcttctcaagctgatttggctgtactg
gtaatctctgccaggaaaggagagtttgaaactggatttgaaaaaggaggacagacaaga
gaacatgcaatgttggcaaagacagcaggtgtaaaacacttaattgtgcttattaacaag
atggatgatccaacagtaaattggagcaatgagagatatgaagaatgtaaagagaaactg
gtgccgtttttgaaaaaagttggctttaatcccaaaaaggacatccacttcatgccatgc
tcaggactgacaggagcaaaccttaaggagcagtcagatttctgcccttggtacattgga
ttaccatttattccatatctggataatttgccaaacttcaatagatcagttgatggacca
atcaggctgccaattgtggataagtacaaggatatgggcactgtggtcctgggaaagctg
gaatcaggatctatttgtaaaggccagcagcttgtgatgatgccaaacaagcacaatgtg
gaagtccttggaatcctttccgatgatgtggaaaccgattctgtagccccaggtgaaaac
ctcaaaatcaggctgaaaggaattgaagaggaggagattcttccagggttcatactttgt
gatcctaataatctttgtcattctggtcgcacatttgatgcccagatagtgattatagag
cacaagtccatcatctgcccaggttataatgcggtgctgcatatccatacctgtattgaa
gaagtcgaaataacagccttaatctgcttggtagacaagaaatcaggagaaaagagtaag
actcgaccccgtttcgtgaaacaggatcaagtgtgcattgcccgcttgaggacagcagga
actatctgccttgagacctttaaagacttccctcagatgggtcgctttactttaagagat
gagggtaagaccattgcaattggaaaagttctgaaactggttccagagaaagactaa
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