Cervus canadensis (wapiti): 122433796
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Entry
122433796 CDS
T07554
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03015
mRNA surveillance pathway
ccad05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122433796 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
122433796 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122433796 (HBS1L)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122433796 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
122433796
NCBI-ProteinID:
XP_043312703
LinkDB
All DBs
Position
33:complement(8663645..8744804)
Genome browser
AA seq
686 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSAVEPVEEYDYE
DLKEFSSSLVNHQLSGIDQARLYSCLDHMREVLGDAVPDDILIEAVLKNKFDVQKALSVV
LEQDKVQNFKVRSEGAISTGKIAKEKSIDSQSSQSESEIVPKVTKMTVSGKKQTMGFEVP
RVTAEENGHSFHTPQKGHSSEDTNLVSSDVLESASKSALPSYTIQASEEQSSTPTPVKKS
SKLRQQIDIKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGDVNKRTMHKYEQE
SKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITG
AAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERF
QEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFK
PPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHD
EPVDWAAAGDHVSLTLVGMDIIKINVGCIFCVPKEPIKVCTRFRARILIFNIEIPITKGF
PVLLHYQTVSEPAVIKRLISVLSKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKD
FKELGRFMLRYSGSTIAAGVVTEIKD
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgac
ctctatggccagtctgtagaggatgattattgtatttccccatcaacagctgctcaattt
atttactcacgacgtgacaaaccttcagctgttgaacccgtagaagaatatgattatgaa
gatttgaaagaattctccagttctcttgtgaatcatcagctaagtggaattgatcaagct
cgtctttattcatgccttgatcacatgagagaggtacttggagatgctgtgccagatgac
atattgattgaagcagttctgaagaacaagtttgatgtgcagaaggctttgtcagtggtt
ctggagcaagataaagtgcagaattttaaagtcaggagtgagggagcaatatctacagga
aaaatagcaaaagaaaaatcaatagattcccagtcatctcaaagtgaatctgaaattgtg
ccaaaagttactaagatgactgtatctggaaagaagcaaactatgggatttgaagtgccc
agagtaactgctgaagaaaatggtcatagtttccacacacctcaaaaaggacactctagt
gaagataccaaccttgtttcttctgatgtacttgagagtgcttctaaatcagctcttcca
tcctacaccattcaagcatcagaagagcagagttcaacaccaacaccagtgaaaaagtct
agcaagctgaggcaacaaatagatatcaaagcggaactggagaagcggcaaggaggaaag
cagctgctcaacctagtggtcattggtcatgttgatgctgggaagagtactctgatggga
catttgctttatcttctgggtgacgtaaacaaaagaactatgcataagtatgaacaagag
tctaaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggacgagactggtgaa
gaaagggaaaggggggtaacaatggatgttggtatgacaaagtttgagaccaaaacgaaa
gttattacattaatggatgctccaggccataaggatttcattccaaatatgattacagga
gcagcccaggcagatgtagctgttttagttgtagatgccagcaggggagagtttgaagct
ggatttgagactgggggacaaacacgagagcatggcctcttggttcgttctcttggagtg
acccaactcgcagttgccgtcaataaaatggatcaggttaattggcaacaagaaaggttt
caagagattactggaaaacttgggcactttcttaagcaagcaggttttaaggaaagtgat
gtagcttttatccctacaagtggtctcagtggtgaaaatctaatcacaagatctcaatca
agtgaacttacaaaatggtataaaggactatgtttattagaacaaattgattccttcaag
cctcctcaaagatctatagataagccttttagattatgtgtatctgatgttttcaaagat
caaggatctggattttgtgtaactggcaaaattgaagctggttatatccaaactggtgac
cgactactagcaatgcctcctaatgaaacttgtactgcaaaaggaatcactctgcacgat
gaacctgtcgactgggcggcagcaggagatcatgttagtcttacgttggttggaatggat
atcatcaaaatcaatgttggctgcatattttgtgtccccaaagaacccattaaggtttgc
actcgtttcagagcccgaattctcatctttaatattgaaattcctatcactaaaggattt
cccgtgctgttacactaccaaaccgtcagtgaacctgctgttattaaaagattgattagt
gtcttaagcaaaagcactggtgaagtcacaaagaaaaagcctaaattgttgaccaaaggc
cagaatgcattagtggagctacagacacaaagaccagtggctcttgagctgtacaaagac
tttaaagagctggggagattcatgctgcgctacagcggttccaccatagctgctggtgta
gtgactgagataaaagattga
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