Cervus canadensis (wapiti): 122434297
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Entry
122434297 CDS
T07554
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes protein 1A isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04110
Cell cycle
ccad04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122434297 (SMC1A)
04114 Oocyte meiosis
122434297 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccad03036
]
122434297 (SMC1A)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122434297 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
122434297 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
122434297
NCBI-ProteinID:
XP_043313417
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All DBs
Position
X:complement(54041808..54087873)
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AA seq
1233 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE
DSVSGSQRTSNIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggggttcctgaagctgattgagatcgagaactttaaatcgtacaagggtcggcagatt
atcggaccatttcagaggttcaccgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgccatcagctttgtgttgggtgagaaaaccagcaacctgcgggtaaagacc
ctaagggacctgatccacggagctcctgtgggcaaaccagcagccaaccgagcctttgtc
agcatggtctattctgaagagggtgctgaggaccgcacgtttgcccgtgtcattgtagga
ggttcctctgagtacaagatcaacaacaaagtggtccagctacatgagtacagtgaggaa
ttagagaagttgggcattcttatcaaagctcgtaacttcctcgtcttccagggtgctgtg
gaatccattgccatgaagaaccccaaagagaggacagctctttttgaagagatcagtcgc
tctggggagctggcccaggaatatgacaagcgaaaaaaggaaatggtaaaagctgaagag
gacacacagtttaattaccatcgcaaaaaaaacattgcagctgaacgcaaggaggccaaa
caagaaaaagaagaggctgaccgctaccagcgcctgaaggatgaggtggtgcgagctcag
gtacagttgcagcttttcaaactttatcataatgaagtggaaattgagaagctcaacaaa
gaactggcctctaagaacaaggagatagagaaggacaagaagcggatggacaaggtagag
gatgagctgaaggagaagaagaaggagctgggcaaaatgatgcgggaacaacagcagatt
gagaaggagatcaaggagaaggactcagagctgaaccagaagcggcctcagtacatcaag
gccaaggaaaatacttcccacaaaatcaagaagctggaagcagccaaaaagtcactacag
aatgctcagaagcattataagaagcgtaaaggtgacatggatgagctggaaaaggagatg
ctgtcagtggagaaagctcggcaggagtttgaggaacggatggaagaggaaagtcagagt
cagggcagagatttgaccttggaggagaatcaggtgaagaaatatcaccggttgaaagaa
gaagccagcaagagagcagctaccctggcccaggagctggagaagttcaatcgagaccag
aaggccgaccaggaccggctggatctggaggaacggaagaaagtagagacagaggccaag
atcaagcaaaagctgcgggagattgaagagaatcagaaacggattgagaaactagaggaa
tacatcacaaccagcaagcagtctctagaggaacagaagaaactagagggggagctgaca
gaagaggtggagatggccaagagacgtattgatgagattaataaggagctgaaccaggta
atggagcagctgggggatgcccgcatcgaccgccaggagagcagccgccaacagcgaaag
gcagaaattatggaaagcatcaagcgcctataccctggttctgtgtacggccgcctcatt
gacctctgccagcccacacaaaagaagtatcagattgcagtaaccaaggttttgggcaag
aacatggatgccattattgtggactcagagaagacaggccgggactgcattcagtatata
aaggagcagcgtggggagcctgagactttcttgcctcttgattacctggaggtaaaacct
acagatgagaaactccgggagctgaagggggcaaagctggtgattgatgtgattcgctat
gagccacctcacatcaaaaaggccctgcagtatgcttgtggcaatgcccttgtctgtgac
aacgtggaggatgcccgccgcatagcctttggaggccaccagcgccacaagacagtggca
ctggatgggaccctgttccagaagtcaggggttatctctggtggggccagtgacctgaag
gccaaggcccgacgctgggatgagaaagcagtagacaagttgaaagagaagaaggagcgg
ttgacagaagagctgaaggagcagatgaaggcaaagcgaaaagaggcagaactacgtcag
gtgcagtctcaggcccatggactgcagatgcggctcaagtactcacagagtgacctagaa
cagaccaagacacggcatctggcccttaatctgcaggaaaagtccaagctggagagtgag
cttgccaactttgggcctcgaatcaatgatatcaagaggatcatccagagccgagagagg
gaaatgaaagacttaaaggagaagatgaaccaggtagaggatgaggtatttgaagagttt
tgtcgggagattggtgtgcgcaatatccgggagtttgaggaagagaaggtgaagcggcag
aatgaaatcgccaagaagcgtttggagtttgagaatcagaagactcgtttgggtatccag
ttggattttgaaaagaaccaactgaaggaggaccaggataaagtacacatgtgggagcag
acagtgaaaaaagatgaaaatgagatagaaaagctcaagaaggaggagcaaagacatatg
aagatcatagatgagaccatggcccagctacaagacctgaagaaccagcacctggccaag
aagtcagaggtgaatgacaagaaccacgagatggaggagattcgtaagaaactggggggc
gccaacaaggaaatgacccatttacagaaggaggtgacagccattgagaccaagcttgaa
cagaagcgcagtgaccgccacaacttgctacaggcctgcaagatgcaggacatcaagttg
ccactgtctaagggcaccatggatgatattagtcaggaagagggtagctcccaaggggag
gattcagtgagtggctcccaacggacttccaatatctatgctcgagaggctctcatcgag
attgactacggcgacctgtgtgaggatctgaaggatgcccaggctgaggaggagatcaaa
caggagatgaacacgctgcagcagaagctgaatgagcagcagagtgtgctccagcgtatt
gctgcccccaacatgaaggccatggaaaagctggaaagtgtccgagacaagttccaagag
acctcagacgaatttgaggcggcccgaaagcgagccaagaaggccaagcaggcatttgaa
cagatcaagaaggaacgctttgaccgcttcaatgcctgttttgaatcggtggccaccaac
attgatgagatctacaaggccctgtcccgtaacagcagtgctcaggcgttcctgggccct
gagaaccctgaggagccctacttggatggcataaactacaactgtgtggctcctggcaaa
cgtttccgacccatggacaacttgtcagggggggagaaaacagttgctgctctggccttg
ctctttgccatccacagctacaagccagcccctttcttcgtcctggatgagatcgatgct
gccctggataacaccaacattggcaaggtggcaaattacatcaaggagcagtcaacttgc
aacttccaggccatcgtcatttctctcaaggaggagttctacaccaaggctgagagcctc
attggagtctaccctgagcaaggggactgtgtgatcagcaaagtcctgaccttcgacctc
accaagtacccagatgccaaccccaaccccaatgagcagtag
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