Cervus canadensis (wapiti): 122434400
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Entry
122434400 CDS
T07554
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccad01002
]
122434400
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccad04121
]
122434400
Enzymes [BR:
ccad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122434400
Peptidases and inhibitors [BR:
ccad01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122434400
Ubiquitin system [BR:
ccad04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122434400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
Motif
Other DBs
NCBI-GeneID:
122434400
NCBI-ProteinID:
XP_043313658
LinkDB
All DBs
Position
X:complement(12372888..12491953)
Genome browser
AA seq
2568 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPFQNQTSSPDSSNENSPATPPDEQGQGDAPPQHE
DEEPAFPHADLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFR
DGLTMSFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPH
CKFHIYNGTRPCESVSTSAHSPEDELFARSSDPRSPKGWLVDLINKFGTLNGFQILHDRF
INGSALNVQIIAALIKPFGQCYEFLSQHTVKKYFIPIIEIVPQFLENLTDEELKKEAKNE
TKNDALSMIIKSLKNLASRIPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINKV
ISSISYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFVI
KEKALTLEDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASK
KQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCS
QDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQSQRSPHVFYRHD
LINQLQHNHALVTLVAENLATYMNSMRLYARDHEDYDPQTVRLGSRYSHVQEVQERLNFL
RFLLKDGQLWLCAPQAKQIWKCLAENAVYVCDREACFKWYSKLMGDEPDLDPDINKEFFE
NNVLQLDPFLLTENGMKCFERFFKAVNCREGKLVTKRRAYMMDDLELIGLDYLWRVVIQS
NDDIASRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDKDSIN
CARQEAVRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSLIVRFPNHGRQVDD
LDIWSHTNDTVGSVRRCILNRIKANVAHTKIELFVGGELIDSEDDRKLIGQLNLKDKSII
TAKLTQVSCNMPSSPDSSSDSSTGSPGTHCNRYSDGPKPEVESCLPGVIMSQHPRYISFL
WQVADLGSNLNIPPLRDGARILMKLMPMDSTIVEKLRAVCLDQAKLGENNLGPSLDSLFF
GPSASRVLYLTEVVYALLMPADMPLADDSCDFQFHFLKSGGLSLVLSMLTKNNFLPNTDM
ETRRGAYFSGLKIAKLLLTAVGYGHIRAVAEACQPVVDGADPITPINQVTHDQAVVLQNA
LQSIPNPSSECILRNVSIRLAQQISDEASRYMPDICVIRAIQKITWASGCGTLELVFSPN
EEITKIYEMTSSPSHEPDVEDEQVCCEALEVMTLCFALVPTALDALNKEKAWQTFIIDLL
LHCPSKIVRQLAQEQFFLMCTRCCMGHRPLLFLITLLFTILGSTARERGKHSGDYFTLLR
HLLNYAFNNNINVPNAEVLLNNEIDWLKRIRDNVKSRGETGVEEPILEGHLGVTKELLAF
QTPEKKYHIGCEKGGANLVKELIDDFIFPASKVYLQCMRNGELPAEQAIPVCSSPVTINA
GFELLVALAVGCVKNLKQIVDCLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFVGLK
NAGATCYMNSVIQQLYMIPSIRNSILAIEGTGSDIDDDMFGDEKQDSESNVDPRDDVFGY
PHQFEDKPALNKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNL
REQHDALEFFNSLVDSLDEALKALGHPAMLSQVLGGSFADQKICQGCPHRYECEESFTTL
NVDIRNHQNLLDSLEQYIKGDLLEGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRF
DYDWERECAIKFNDYFEFPRELDMEPYTVPGVARLEGDNVNPESQLMEQNEQSGSDTAGN
TKYRLVGVLVHSGQASGGHYYSYIIQRNGKDGDRNRWYKFDDGDVTECKMDDDEEMKNQC
FGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDQEDEMIRCISELTITKSHPI
MSPAIERSVRKQNVQFMHNRMQYSLEYFQFVKKLLTCNGIYLNPAPGQDHLLPEAEEITM
ISIQLGARFLFTTGFHTKKIVRGPASDWYDALCILLRHSKNVRFWFAHNVLFSVSNRFSE
YLLECPSAEVRGAFAKLIVFLAHFSLQDGPCPSSFTSPGPSSQACDNLSLSDHLLRAVLN
LLRREVSEHGRHLQQYFNLFVMYANLGMAEKTQLLKLSVPATFMLVSLDEGPGPPIKYQY
AELGKLYSVVSQLIRCCNVSSRMQSSINGNPPLPNPFGDPNLSQPIMPVQQNVADILFVR
TSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQ
ILLIEDSWQAHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSSCPVAY
QILQGNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHS
ARMTLAKACELCPEEVKKVTHGQQIEMEERKEPDDQEAPDDHESSPPEDAPLYPHSSGSQ
YQQNSHIHGQPYTGPAAHHLNNHQKTAQQQQENCEGNEEVSSSEMKDQ
NT seq
7707 nt
NT seq
+upstream
nt +downstream
nt
atgacagccactactcgtggctctccagtaggagggaatgacagccagggccaggctcct
gatggacagtctcagccccccttccagaatcagacctcatcacctgattcttccaatgag
aattccccagcaactcctccagatgaacaaggtcaaggtgatgctccaccacaacatgaa
gatgaagaacctgcatttcctcatgctgacctggcaaagttggatgacatgatcaaccgg
cctcgttgggtggttccagttttgccaaaaggggaattagaagtgcttttggaagctgct
attgatcttagtaaaaaaggtcttgatgttaaaagtgaggcatgtcaacgttttttccga
gatgggctaacaatgtctttcactaaaatccttatggatgaagcagtgagtggctggaag
tttgaaattcataggtgcattattaacaatactcatcgcctagtggaactttgtgtggcc
aagttgtcccaagactggtttccacttctagaacttctcgccatggccttaaatcctcat
tgcaaatttcatatttacaacggtacacgtccttgtgaatcagtttccacaagtgctcat
tcacctgaagatgaattatttgctcgttcctcagatcctcgatcaccaaaaggttggcta
gtggatctcatcaataaatttggcacattaaatgggttccagattttgcatgatcgtttt
atcaatggatcagcattaaatgttcaaataattgcagctcttattaaaccatttggacaa
tgctatgagtttctcagtcaacatacagtgaaaaagtactttattccaattatagaaata
gttccacaatttttagaaaatttaactgatgaagagctgaaaaaagaagcaaagaatgaa
accaaaaatgacgccctttcaatgattattaagtctctgaagaatttagcttcaaggatt
ccaggccaagaagaaactgtaaaaaatttggaaatttttaggttgaaaatgatactaaga
ttgttgcaaatttcttcttttaatgggaagatgaatgccctgaatgaaattaacaaggtg
atttctagtatatcatattatactcatcggcatggtaatcctgaggaggaggaatggctg
acagctgagagaatggcagaatggatacagcagaataatatcttatccatagtcttgcga
gatagtcttcatcagcctcagtatgtagaaaagctagagaagattcttcgttttgtgatt
aaagaaaaagctcttacgttagaagatcttgataatatctgggcagcacaggcagggaaa
catgaagccattgtaaagaatgtacatgaccttctggcaaagttggcttgggatttttct
cctgaacaacttgatcatctttttgattgctttaaggcaagttggacaaacgcaagtaaa
aagcagcgtgaaaagctactagagctgatacgacgtcttgcagaagatgataaagatggt
gtgatggcacacaaagtgttgaaccttctttggaatctggctcatagtgatgatgtgcct
gtagacatcatggacctagctctcagtgcgcacataaaaatacttgattatagttgttcc
caggatcgagacacacaaaagatccagtggatagatcgctttattgaagaacttcgcaca
aatgacaaatgggtaattcccgcgctgaaacaaataagagaaatttgtagtttgtttggg
gaagcacctcagaatttaagtcaatctcagcgaagtccccacgtattttatcgtcatgac
ttaatcaatcagcttcagcacaatcacgccttagttactttggtagcagaaaaccttgcg
acttacatgaatagcatgcgactatatgctagagaccatgaagactatgacccacaaact
gtgaggcttggaagtagatacagtcatgttcaagaagttcaagaacggcttaacttcctt
aggtttttattaaaggatggccagctgtggctttgtgctcctcaggcaaaacaaatatgg
aaatgcttagcagagaacgcagtttatgtttgtgatcgtgaagcctgttttaagtggtat
tccaagttaatgggggatgaaccagacttagatcctgatattaataaggaattctttgaa
aataatgtgcttcaacttgatcctttcctgttaactgaaaatggaatgaaatgttttgaa
cgattcttcaaagctgttaattgtcgagaagggaaactggtaacaaaaagaagagcctat
atgatggatgatttggaactaataggattagactacctttggagagtcgtaattcagagt
aatgatgatattgccagcagagctatagatctccttaaagaaatatatacaaatcttggc
cccagattacaggtcaatcaggtggttatccatgaagactttattcagtcttgctttgat
cgtttgaaagcttcatatgatacattgtgtgttttggatggtgacaaagacagcattaac
tgtgcaagacaggaagctgttcgaatggttcgagtattgactgttttacgtgaatacata
aatgaatgtgatagtgattatcatgaggaaagaacaattctacctatgtcaagagcattc
cgtggtaaacatctctctctcatagttcggtttccaaaccatggcagacaggttgatgat
ttggatatatggtctcatacaaatgatactgttggttcagtacgacgatgtattctcaat
cgtattaaggcaaatgtagcccatacaaaaattgaactctttgtaggtggtgaattaata
gattctgaagatgacagaaagctaattggacagctaaacttaaaagacaaatcaataatt
acggccaaacttacacaagtaagttgcaatatgccttccagccctgatagttcttctgat
tcctcaactggatctcctgggacccattgtaatcgttacagtgatggccctaaaccagaa
gtggaaagttgtttgcctggggtgataatgtcacaacatcccaggtacatctctttcctt
tggcaagtcgctgacttaggtagcaatctgaatataccacctcttagagatggagccaga
atacttatgaaacttatgccaatggatagcacaatagtagaaaaactaagagctgtttgt
ttggaccaggcaaaacttggagaaaataaccttggaccatctcttgattcacttttcttt
ggtccttctgcttcccgagttttatatctaacagaggttgtttatgccttgttaatgcct
gctgatatgcctctggcagatgattcttgtgactttcagtttcacttcttgaaaagtggt
ggcttatcccttgtactgagtatgctgacaaaaaacaacttcctgccaaatacagatatg
gaaacacgaaggggtgcatacttcagtggtcttaaaatagccaaactcttgttaactgca
gtaggttatggccatattagagctgtagcagaagcttgtcagccagttgtagacggtgca
gatcccataacaccgattaatcaagttactcatgatcaagcagtggtgctacaaaatgct
cttcagagcattcctaacccgtcatctgagtgtattcttagaaatgtatcaatacgtctt
gctcaacaaatatctgatgaggcttcaagatacatgcctgatatttgtgttattagagct
atacagaaaatcacctgggcatcaggatgtgggacattggagctagtatttagcccaaat
gaagaaatcactaaaatttacgagatgaccagcagtccaagccatgagccagacgtggaa
gatgaacaggtttgctgtgaagcattggaagtgatgactctatgttttgctctagttcca
acagccctggatgcacttaataaagaaaaggcttggcagacatttatcattgacttatta
ttgcattgtcccagcaaaattgttcgtcagttggcacaagagcagttttttttaatgtgc
accagatgttgcatgggacacagacctctgcttttcctcattactttgctctttaccatt
ttggggagcacagcaagagagagaggtaaacattcaggtgactacttcactcttcttcgg
caccttcttaattatgctttcaacaataatattaatgtgcccaatgctgaagttcttctc
aacaatgaaattgactggctcaaaagaattagggataatgttaaaagtagaggtgaaaca
ggcgttgaagagcctatcttggaaggccaccttggggtaacaaaagagttactggccttt
caaacacctgagaaaaagtatcatattggttgtgaaaaaggaggtgctaatcttgttaaa
gaattaatagatgatttcatctttcctgcctccaaagtttacctgcagtgtatgagaaat
ggagaactaccagctgagcaggctatcccggtctgtagttcaccagttaccatcaatgct
gggtttgaactacttgtagcattagctgttggctgtgtaaagaatctcaaacagatagta
gattgtttgactgaaatgtattacataggaacagcgataactacttgtgaagcacttact
gagtgggaatacctaccacctgttggaccccgcccaccaaaaggatttgtgggactcaaa
aatgctggtgctacttgttatatgaattctgtgatccagcagttatacatgattccttcc
atcaggaatagtattcttgcaattgaaggcacaggtagtgatatagatgatgatatgttt
ggtgatgagaagcaggacagtgaaagtaatgttgatccccgagatgatgtatttggatac
cctcatcaatttgaagacaaaccagcattaaataaaacagaagataggaaagagtacaat
attggtgttctgagacaccttcaggttatctttggtcatttagctgcttcccggctacag
tactatgtccccagaggattttggaaacagttcagactttggggtgagcctgttaatctt
cgtgaacaacatgatgccttagagttttttaattctttggtggatagtttagatgaagct
ttaaaagctttaggacatccagctatgctaagtcaagtcctgggaggttcctttgctgat
cagaagatttgccagggttgcccacatagatatgagtgtgaagaatcttttacaactctg
aatgtagatattagaaatcaccaaaaccttctcgattctttggaacagtatatcaaaggc
gatttattggaaggtgcaaatgcttatcgttgtgaaaaatgtgataaaaaggttgataca
gtaaaacggttgctaattaaaaaattgcctcctgttcttgctattcaattgaaacgtttt
gactatgactgggaaagagaatgtgcaattaaattcaatgattactttgaatttccacga
gagctggacatggaaccttacacagtaccaggtgttgcaaggctggaaggagataatgta
aacccagagagtcagttgatggaacagaatgaacagtctggaagtgatacagctggaaac
acgaaatacagacttgtgggggtgcttgttcacagtggtcaagcaagtggtggacattat
tactcctacatcattcagaggaatggcaaagatggtgacagaaatcgctggtataaattt
gatgatggagatgtaacagaatgtaaaatggatgatgatgaagaaatgaaaaatcagtgt
tttggtggagagtacatgggagaagtatttgatcatatgatgaaacgcatgtcatacaga
agacagaaaagatggtggaatgcttatatactgttttatgagcgaatggacacaatagac
caagaagatgaaatgataagatgcatatcagagctaactatcacaaaatcccatccgatt
atgtcaccagccattgagagaagtgtgcgaaaacaaaatgtgcaattcatgcataaccga
atgcagtacagcttagaatattttcagtttgtgaaaaaattgcttacatgtaatggtatt
tacttaaaccctgctccaggacaagatcacttattgcctgaagccgaagaaattaccatg
attagcattcagcttggagctaggttcctttttaccactggatttcacaccaagaaaata
gtccgtggccctgccagtgattggtatgatgcattgtgcattctgctccgtcatagcaag
aatgtacgtttttggtttgctcataatgtgcttttcagtgtttcaaatcgtttctctgaa
tatcttctggagtgccctagtgctgaagtgagaggtgcatttgcaaaacttatagtattt
cttgcacatttttctttgcaagatgggccttgtccttcatctttcacatctccaggacct
tctagtcaggcatgtgacaatttaagtttgagtgatcatctcctaagagcagtattaaat
ctcctgagaagggaagtgtctgaacatggtcgtcatttacagcagtatttcaatctgttt
gtcatgtatgccaatttaggtatggcagaaaagacacagcttctgaaattgagtgtacct
gctacctttatgcttgtgtctttagatgaggggccaggtcctccaatcaaatatcagtat
gcagaattaggcaagttatactcagtagtgtctcaactgatccgctgttgcaatgtctca
tcgagaatgcaatcttcaatcaatggtaatccccctcttcccaatcctttcggtgaccct
aacttatcacagcctataatgccagttcagcagaatgtggcagacattttatttgtgaga
acaagctatgtgaagaaaattattgaagactgcagtaactcagaggaaaccatcaaatta
cttcgtttttgctgctgggagaatcctcagttctcatctacagtcctcagtgaactactg
tggcaggttgcatattcatacacctatgaacttcggccatatttggatctacttctgcag
attttactgatagaggattcctggcaggctcacagaattcataatgcacttaaaggaatc
ccagatgaccgagatggattgtttgatactatccagcgctctaagaatcactatcaaaaa
agagcataccagtgtataaaatgtatggtggctctctttagcagttgtcctgttgcttac
caaatactacagggcaatggcgatcttaaaagaaagtggacctgggcagtagaatggctt
ggagatgaacttgaaagaagaccatacactggcaatccacaatacacttataataattgg
tctcctccagttcagagcaatgaaacatcaaatggttatttcttagagagatcacatagt
gctaggatgacactggcaaaagcttgtgaactctgtccagaggaggtaaaaaaagtcacc
catgggcagcaaatagaaatggaagaaagaaaagagccagatgaccaagaagccccagat
gatcatgaatcatctccaccagaagatgccccattatatcctcattcatctggatctcag
tatcaacagaatagtcacatacatggacagccatatacaggaccagcagcacatcacttg
aacaaccatcagaaaactgcccagcagcaacaagaaaactgtgaaggcaatgaagaagta
tcctcgtctgaaatgaaggatcagtga
DBGET
integrated database retrieval system
