Cervus canadensis (wapiti): 122434442
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Entry
122434442 CDS
T07554
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04151
PI3K-Akt signaling pathway
ccad04382
Cornified envelope formation
ccad04510
Focal adhesion
ccad04512
ECM-receptor interaction
ccad04518
Integrin signaling
ccad04820
Cytoskeleton in muscle cells
ccad04926
Relaxin signaling pathway
ccad04933
AGE-RAGE signaling pathway in diabetic complications
ccad04974
Protein digestion and absorption
ccad05146
Amoebiasis
ccad05165
Human papillomavirus infection
ccad05200
Pathways in cancer
ccad05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122434442 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122434442 (COL4A6)
04518 Integrin signaling
122434442 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122434442 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122434442 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
122434442 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
122434442 (COL4A6)
09158 Development and regeneration
04382 Cornified envelope formation
122434442 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122434442 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
122434442 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
122434442 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
122434442 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
122434442 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccad04147
]
122434442 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
ccad00536
]
122434442 (COL4A6)
Exosome [BR:
ccad04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
122434442 (COL4A6)
Glycosaminoglycan binding proteins [BR:
ccad00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122434442 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
122434442
NCBI-ProteinID:
XP_043313750
LinkDB
All DBs
Position
X:137608178..137922552
Genome browser
AA seq
1706 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKKPYGKPCGGQDCNGGCKCSPEKGARGRPGPIGIQGP
TGPQGLPGPSGLSGLKGERGSPGPLGLYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGP
PGLDGCNGTQGAVGFPGPDGYPGLPGPPGLPGQKGSKGEPVLVQGSLKGMKGEPGLPGLD
GITGPQGTAGSPGAVGPIGPPGLQGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGPQGFPGISGPPGLPGFGIAGEKGEKGIPGLPGPRG
PMGLEGVQGPPGSQGRKGSSGFPGLNGFPGIKGEKGGIGLPGPDIFIDTDGAVISGYPGD
PGMPGLPGLKGDEGIQGLPGPPGAPGLPALPGGPGALGPKGALGLKGERGNPGRTTTGAT
GLPGRDGLPGLPGLSGPPGAASETGTLQSTEPGLPGLRGEQGPKGHVGLKGMKGDPGFCA
CDGGVPNMGPPGEPGLPGPPGLLGLPGLKGTKGDPGSGGAQGPSGDPGVFGPRGPTGPKG
KKGDPTLSTGSGMPGEQGDPGPQGLPGETGAPGKDGIPGLPGLPGLLGDGAQGFPGEKGL
PGLPGEKGHTGPTGPPGIGLPGAPGPRGLPGDKGVDGLPGQPGPRGVPGDCCCREEVGKR
DLDTEGGITLPCIIPGPYGPSGLPGAPGFPGPKGARGLPGAPGQPGLRGNKGNPGSPGLV
HLPELPGFPGPHGEKGLPGFPGLPGKDGLPGKVGSPGLPGPKGAPGDILDAENGAPGEQG
LQGLPGDRGFPGDSGLPGLKGLLGNSGLLGPKGERGSPGIPGRVGQPGPPGPSGLFGIKG
KPGLRGPPGFPGISGHPGKKGPRGEIGLPASAGKRGLPGLKGLPGPPGPIGFLGNSGLPG
ATGLPGLPGLKGEKGSVGLTGFPGIPGLPGIPGASGLKGIPGSTGRVGPSGWAGSPGEKG
DRGEPGLFGIPSHRPPMLNLRFKGDKGSQGSAGAIGFPGPRGDKGEAGHPGPPGLPGAPG
FPSLIKGLSGRPGSPGSIGLRGLPGLKGLPGITGFPGIPGESGSQGLSGAPGLPGASGLP
GLKGDQGQTPGISGRPGPKGQPGESGFKGVKGKDGPVGDVGFPGNKGEDGKVGISGDVGL
PGFLGLPGVAGMRGNPGLPGSPGHPGATGPLGPPGLIGTKGFPGLPGLHGLNGLPGTKGT
HGTPGPSITGVPGPAGLPGPKGEKGSPGIGIGAPGKPGIRGPKGSQGFPGLQGTAGLPGA
LGLSLPSVIEGQPGDPGRPGLDGERGRPGPPGPPGPPGPSSDQGDPGDPGFPGIPGPQGP
KGDQGIPGFSGLPGELGLKGMRGEPGFMGTPGKVGPPGDPGLPGMKGKAGPRGLSGPRGA
PGHTPIAEAIQAPPGPMGLPGIDGIPGLMGDPGVQGPVGLQGSKGLPGIPGKDGTNGLPG
PPGALGDPGLPGLQGPPGFEGAPGKPGPFGRAGVPGQSLRVGYTLVKHSQSEQVPLCPSG
MSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWL
STTAPIPMMPVGQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLM
HTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGSRGTCHYFANKYSFWLTTVEERQQFRE
EPVSETLKAGQLHTRVSRCQVCMKSV
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgcttctggttactttgtgcctgactgaggaactggccgga
gcgggagagaagaagccctatgggaagccatgtgggggccaagactgcaatgggggctgt
aagtgctctcctgagaaaggagccagagggagaccaggaccaattggaattcaaggtcca
acaggtcctcaaggacttcctggccctagtggtttatcaggcttgaaaggagaaaggggc
tccccaggcccgctgggactgtatggaccaaaaggcgataagggtcccatgggtgttccc
ggctttcttggcatcaatggaattccgggccaccctggacagccaggacccagaggccca
ccaggcctggatggctgtaatggaactcaaggagctgttggatttccaggccctgatggc
tatcctgggcttcctggaccacctgggcttcctggtcagaaaggctctaaaggtgaacct
gtccttgtccaaggtagtctcaaaggaatgaagggggagcctgggctgcctggactggat
ggaatcactggcccacaaggaacagctggatctccaggagctgtaggacccataggacca
ccaggattgcaaggtcctcctggcccccctggtttccctggtcctgatgggaatatgggg
ttaggtttccaaggagagaaaggagtcaagggagatgttggcctgcctggtcctgcagga
cccccaccatctactggagaactggaattcatgggatttcccaaagggaagaaaggatcc
aagggtgaaccagggcctcagggcttcccaggaataagtggtccacctggtctgccggga
tttggaattgctggagaaaaaggagaaaagggaattcctggtttgccaggacctaggggt
cccatgggtttagaaggagtccaaggccctccagggagtcagggcaggaaggggtcttca
ggtttccctgggcttaatggattcccaggaattaagggtgaaaaaggtggcattggcctg
ccaggtccagatattttcatcgatacagatggtgctgtgatctcaggttatcctggagac
cctggtatgccaggcctcccaggccttaaaggagatgaaggcatacagggcctacctggc
cctcctggcgcccctggattaccagctttaccaggtggccccggtgctctggggcccaag
ggagctctaggcctgaagggggaacgaggaaaccctggccgcaccacaacgggggcaact
ggtctccctggcagagatggtttgccaggcctcccaggcctatcaggcccacctggtgca
gcatctgagacgggaaccctacagagcacagaaccaggattgccgggactccgaggggaa
caaggtccaaaaggacacgtaggcctcaaaggaatgaaaggggacccaggtttttgtgct
tgtgatggtggtgtccccaacatggggccacctggggagccaggcctgcctgggccacca
ggacttctgggccttccaggtcttaaaggaaccaaaggtgatccaggctctgggggtgca
cagggcccatcaggggatccaggtgtatttgggcctcgaggtccaacaggccctaaagga
aagaaaggggacccgaccctcagcacaggatcagggatgccaggagagcaaggtgatcct
ggcccccaggggctccctggtgagacaggagccccaggcaaggatggaataccaggttta
ccagggctgccaggccttctgggtgatggtgcacagggcttccccggtgaaaaggggtta
ccaggacttcctggtgaaaaaggccacactggtccaactggccccccaggaattgggcta
ccaggggctcctggacctcgtggacttcctggagataaaggagtagatggattaccaggg
caaccaggcccccgtggagttccaggtgactgctgctgcagggaggaggttgggaaaaga
gacttagacacagagggaggtatcaccttgccttgtattattcctggaccgtatggtcca
tcaggactcccaggagctcccggattcccaggccctaaaggggcccgtggcctccctggg
gctccaggccaacctggattgcgtggaaataaagggaaccccggaagtccaggattggtt
cacctgcctgaattgccagggtttcctggacctcatggggagaagggcttacctgggttt
cctgggctccctggaaaagatggcttgcctgggaaagttggcagccccggcttaccaggt
cccaagggagcccctggtgacatccttgatgctgaaaatggtgctccaggggagcaaggc
ctacagggactgcctggggacagaggatttcctggagactctggccttccaggactcaag
ggtttgcttgggaattcgggcttgctcggccccaaaggtgagcggggcagccctggaata
ccaggccgcgtgggtcagccaggccccccaggccctagtggtctatttggcatcaagggc
aaacccgggctccgcggacccccaggctttccaggcatttcaggacatcctggaaagaaa
ggtccaagaggcgagataggtctccctgcatcagctggaaagagaggcctgcctgggctg
aaaggacttccgggaccaccagggccaattggcttcctggggaactcaggcttgccaggg
gccactgggttgccaggcctgccaggtctgaagggtgagaaggggtctgttggactgaca
ggttttccagggattccaggtctccctggtattcctggagcaagtggattaaagggaatt
cctgggtcaacaggaagagtggggccatctggatgggctggtagccctggtgaaaaagga
gacagaggtgaaccaggcctctttgggatacccagtcatcgacctccaatgctgaacctc
cgcttcaaaggagacaaaggttctcagggctcagctggagccattggatttcccggaccc
agaggtgacaaaggagaggctggccaccccgggccaccaggcttgcctggagctcctggc
ttccccagcctcatcaagggacttagtgggagaccaggctcccctggctccataggacta
cggggcttacccggcctgaaggggctccctggaatcacaggtttcccaggaattccagga
gaaagtggttcacagggtctcagtggagctcccgggctaccaggagcatctggtctccca
ggtttaaaaggagatcaaggccagacacctggaatttctggtaggccaggacccaaggga
caacctggggagtctggtttcaaaggtgtgaaaggaaaagacggaccagttggtgatgtg
ggtttcccaggaaacaaaggtgaagatgggaaagttggtatttctggagatgttggcctt
cctggcttcctaggactccccggagttgcaggcatgagaggaaatccagggcttccaggt
tctccaggccacccaggggcaactgggcccctggggccccctggcctaataggaaccaaa
ggtttccctggacttccaggtttacatggactgaatgggcttccgggaaccaagggaacc
catggaactccaggacctagtataactggtgtgcctgggccagctggcttgcctggtccc
aaaggggaaaaaggttctccaggaattggcatcggagccccaggaaagccaggtataaga
ggacccaaaggtagtcaaggttttccaggtctccagggcaccgctggtctccctggtgcg
ctgggcctctccttgccttcagtcatagaaggacagcctggcgaccctgggcgaccaggc
ctagatggagaacgaggccgcccaggcccccctgggcctccaggcccccctggaccatcc
tcagatcaaggcgaccctggagaccctggcttccctggaattcctggccctcaagggccc
aaaggagaccaaggaattccaggtttctctggcctccctggagagctaggattgaaaggc
atgagaggtgagcctggcttcatggggactccaggcaaggttggaccacctggagaccca
ggacttcccgggatgaaggggaaggcggggccaagaggcttatccggccctcgaggtgct
cctggacacacacccattgcagaagccatccaggctccccctggacccatgggtcttcca
ggcattgatggcatccctggcctcatgggagaccctggggtccaaggacctgtgggccta
caaggatctaaaggtttacctggcatccccggcaaagatggcaccaatggactccctggc
ccacccggggctcttggtgatcctggtctccctggactacaaggccctccgggatttgaa
ggagctccagggaagccgggccccttcgggagggctggagtgcctgggcagagcctgaga
gtgggctacaccttggtgaagcacagccagtcagaacaggtgcccctgtgccccagtggg
atgagccagctctgggtgggttacagcctgctgttcgtggaggggcaggagaaagcccac
aaccaggacctggggtttgctggctcctgcctgccccgcttcagcaccatgccattcatc
tactgcaacatcaatgaagtgtgccactatgcccgacggaatgataagtcctactggctc
tccaccaccgcccccatccctatgatgcccgtcggccagacacagatcccccagtacatc
agccgctgctctgtgtgtgaggcgccctcgcaagccattgctgtgcacagccaggacatc
accatcccacagtgccccctgggctggcgcagtctgtggattgggtactccttcctcatg
cacacagccgccggtgcagagggaggaggccagtccctggtctctcctggatcctgccta
gaggatttccgggctactcctttcatcgagtgcagtggttcccggggcacctgccattat
tttgccaacaaatatagtttctggctgacaacagtggaagagaggcagcagttcagggag
gagcccgtatctgagacactgaaagccggacagctccatacccgggtcagtcgctgccag
gtgtgtatgaaaagtgtgtag
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