KEGG   Cervus canadensis (wapiti): 122434534
Entry
122434534         CDS       T07554                                 
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X1
  KO
K14966  host cell factor 1
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad03083  Polycomb repressive complex
ccad04980  Cobalamin transport and metabolism
ccad05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    122434534 (HCFC1)
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    122434534 (HCFC1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    122434534 (HCFC1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccad01009]
    122434534 (HCFC1)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccad03036]
    122434534 (HCFC1)
   03029 Mitochondrial biogenesis [BR:ccad03029]
    122434534 (HCFC1)
Protein phosphatases and associated proteins [BR:ccad01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122434534 (HCFC1)
Chromosome and associated proteins [BR:ccad03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     122434534 (HCFC1)
   HMT complexes
    COMPASS/SET1 complex
     122434534 (HCFC1)
    MLL-HCF complex
     122434534 (HCFC1)
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     122434534 (HCFC1)
Mitochondrial biogenesis [BR:ccad03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    122434534 (HCFC1)
SSDB
Motif
Pfam: Kelch_5 Kelch_3 Kelch_4 Kelch_1 Kelch_6 Kelch_2 fn3
Other DBs
NCBI-GeneID: 122434534
NCBI-ProteinID: XP_043313925
LinkDB
Position
X:complement(142744501..142767929)
AA seq 2049 aa
MASAVSAANSPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIETL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PANPPKSPAPAAAAPAVQPLTQVGITLLPQAAAAPPTTTTIQVLPTVPGSSISVPAAART
QGVPAVLKVTGPQATTGTPLVTMRPASQAGKAPVTVTSLPAGVRMVVPTQSAQGTVIGSS
PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSPV
MVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT
ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT
ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ
AGATGRGLPRCAGEKAGVTSSAGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQ
GVTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTG
TVSTSLAGAGGHSTSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAAGLTTPT
ITMQPVSQPTQVTLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGT
VTLVCSNPPCETHETGTTNTATTTVVANLGGHPQPTQVQFVCDRQEATAALVTSTVGQPN
GSVVRVCSNPPCETHETGTTSTATTAMSGIGGGPRRDIRLACAATTIPTVVRVSVAAGAS
EGAQVSIKPACQTRQTSATSTTMTVMATGAPCSAGPLLRPSVALEAAGRGATLLQLGPLS
AQVRPSGEEGSLASLGPLVSVGRQLEVHHTHTTNTATVARSAMGAGEPHELLGAPTLVYE
SSASASVTAAALEALLCPSATVTQVCSNPPCETHETGTTHTPTTATSGGAAGQPEGGQQP
PTSRPCETHQTASTGTTMSVSLGALLPDATPSHRTLESSLEVAVPPAVAPQPGASLLTPF
PTQRVCSNPPCETHETGTTHTATTVTSNMSSNQDPPPPAGDQGEVESTQGDSVNIASSSP
ITTTVSSTLTRAVTTVTQSTPVPGPSVPKISSVTETAPGALTTEVPIPATITVTIANTET
SDMPFSAVDILQPPEELQASPGPRQQLPPRQLLQPASAPLVGDSAEVLSASQSPELQAAV
DLSSTGDPSSGQEPASSAVVATVVVQPPPPTQSEVDQLSLPQELMAEAQAGTTTLMVTGL
TPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMAGTGEPMDTSEAAAAVTQAE
LSHLSAEGQEGQATTIPIVLTQQELAALVQQQQLQEAQAQQQQHHLPTEALAPADSLNDP
TIESNCLNELAGAVPSTVGLLPPTATESLAPSNTFVAPQPVVVASPAKLQAAATLTEVAN
GIESLGVKPDLPPPPSKAPVKKENQWFDVGVIKGTNVMVTHYFLPPEDAVPTDDDSGTVP
DYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGA
HLTWEPPSVTSGKIIEYSVYLAIQSAQAGGETKSSTPAQLAFMRVYCGPSPSCLVQSSSL
SNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDSSGAKPASKRPMSSPEMKSA
PKKSKADGQ
NT seq 6150 nt   +upstreamnt  +downstreamnt
atggcttcggccgtgtcagccgccaactcgccagcggtgctcttgcagccccgctggaag
cgagtggtgggctggtcgggtccagtgccccggccccgccacggccaccgcgccgtggcc
atcaaggagctcatcgtggtgtttggcggcggcaacgaggggatagtggacgagctgcac
gtgtacaacacggcgaccaaccagtggttcatcccggctgtgagaggggacatccctcct
ggatgtgcagcctatggcttcgtgtgcgatgggacacgcctgcttgtgttcggagggatg
gtggaatatgggaagtacagcaacgacctctacgagctccaggcaagccggtgggaatgg
aagagactgaaagcaaagacgcccaaaaatgggcctcctccgtgtcctcgacttgggcac
agtttctcccttgtgggcaacaaatgttacctgtttgggggtctggccaatgatagtgag
gaccccaagaacaacattccgaggtacctgaatgacttatacatcctggaactgcggccg
ggctctggagtggtagcctgggacattcccatcacttatggtgtcctgcccccaccccga
gagtctcacactgcagtggtttacaccgagaaagacaacaagaagtccaagctggtgatc
tatggagggatgagtggctgcaggctgggggacctctggaccctggatatcgagactttg
acgtggaataagcccagcctcagcggggtggcacctcttcctcgaagtctccactcggcc
acgaccataggaaacaaaatgtacgtgtttggtggctgggtgcccctcgtcatggatgac
gtcaaagtggccacacacgagaaggagtggaagtgtaccaacaccctggcttgtctcaac
ctggataccatggcttgggagaccatcctgatggatacgctggaagacaatattccccgg
gcccgtgctggccactgcgcagtagccatcaatacccgcctttacatttggagtgggcgt
gacggctaccgaaaggcctggaacaaccaggtctgctgcaaggacctttggtacctggaa
acagaaaagccaccacctccagcccgggtacagctggtgcgagccaacactaactccctg
gaggtgagctggggggccgtggcgacagccgacagttaccttctgcagctccagaaatat
gacattcctgccacggctgccactgccacctcccccacacccaatccagtcccgtctgtg
cctgccaaccctcccaagagccctgccccagcagcagccgcacctgccgtgcagccgctg
acccaagtaggcatcacgctcctgccccaggctgctgccgcgcccccgaccaccaccacc
atccaggtcttgccgacggtgcctggcagctcaatctccgtgcccgccgcagccaggact
caaggtgtcccggctgtgctgaaagtgactggtcctcaggctaccacgggaaccccgtta
gtcaccatgcgacctgccagccaggctgggaaagcccccgtgaccgtgacctcccttccc
gcaggcgtgcggatggttgtgcctacacagagcgcccaggggacggtcattggcagcagc
ccacagatgagtggtatggctgcgttggcagccgcggctgctgccactcagaaaatccct
ccttcctcggcacccacggtcctgagtgtcccggctggcaccaccatcgtcaaaaccgtg
gccgtaacgccgggcaccaccacgctcccagccactgtgaaggtggcctcctcaccagtc
atggtgagcaacccagctactcgcatgctgaagactgcagctgcccaggtggggacctct
gtctcttctgccgccaacacgtctactcgtcccatcatcactgtacacaagtctgggact
gtgacagtggcccagcaagcccaggtggtgaccacagtggtgggtggggtcaccaagacc
atcaccctggtgaagagccccatttcggtcccaggaggcagtgctctgatttccaatctg
ggcaaagtgatgtcagtggtccagaccaaaccggttcagacttcggcagtcacaggccag
gcgtctacaggcccagtgactcagatcatccagactaaaggacccctgccagccgggacc
atcctgaagctggtgacgtctgcagatggcaagcctactaccatcatcacaaccacgcag
gccagcggggcagggactaagcctaccatcctgggcatcagcagtgtgtcccccagcacc
accaaacccggcaccacgactatcattaagaccatccccatgtcggctatcatcacacag
gcgggcgccacgggtaggggccttccccggtgtgctggggagaaagcaggcgtgactagc
agtgccggcatcaagtcgcccatcaccattatcaccaccaaggtgatgacttctggaact
ggagcccccgccaaaatcatcacagccgttcccaaaatcgctacgggccacgggcagcaa
ggagtgacccaggtggtgctgaagggcgcacctggccagccaggcaccatcctccgcact
gtgcctatggggggcgtccgcctggtcactcccgttactgtctctgctgtcaagccggct
gtcaccacactggttgtcaagggcaccacaggcgtcacgaccctgggcacagtgacaggc
accgtctccaccagcctggccggagctgggggccatagcaccagcgcctcgctggccacg
cccatcaccacgttgggcaccatcgccaccctctcaagccaggtgatcaaccccactgcc
atcaccgtgtcagcagcacagacaacgctgacagcggccgctgggctcaccacgcccacc
atcaccatgcagcctgtctcccagcctacccaggtgactctgatcacagccccaagtgga
gtggaggcccagcctgtgcacgacctcccagtgtccattctggcctctcctactacggaa
cagcccacggccacggtcaccatcgctgattcgggccagggtgatgtgcagcccggcact
gtgaccctggtgtgctccaacccgccgtgtgagacccacgagacgggcaccaccaacaca
gccaccaccactgtcgtcgctaatctgggggggcacccccagcccacccaagtgcagttc
gtctgcgacagacaggaggccactgctgctcttgtgacctccacggtgggccagccgaat
ggcagcgtcgttcgtgtctgctccaacccgccatgcgagacccacgagaccggcaccacc
agcacagccaccaccgccatgtccggcatcggaggcgggccacggcgagacatccggctc
gcctgcgcggccaccaccattcccactgtagtccgggtcagcgtggctgctggggcgtca
gagggagcccaggtttccatcaagcccgcatgccaaacccgtcagacgagcgcaaccagc
accaccatgactgtgatggccaccggggccccgtgctcagccggcccgctcctcagacca
agcgtggcccttgaggccgctggccgtggtgccactctcttacagctggggcccctgagt
gcccaggtcaggcccagtggcgaggaagggtccctcgccagcctgggcccactggtgtcc
gtggggcgccagctggaggtgcatcacacgcacacgaccaatacggccactgtggcccgc
tctgccatgggtgccggggagccccacgagctgctgggggcccccacactggtgtatgaa
agctcagccagcgcctctgtgactgccgcggctctggaggcactgctgtgcccctcagcc
accgtgacccaggtctgctccaaccccccgtgtgagacccacgagacgggtaccacccac
acacccaccacggccacgtccggaggggctgcaggccagccagagggtgggcagcagcct
cccaccagccggccctgtgagacgcaccagaccgcttccactggcacgaccatgtccgtc
agcttgggcgccctgctcccagatgccaccccctcccacaggaccctggagtccagcctg
gaggtggcggtgccgcccgcagtcgccccccagcccggcgcttcattgctcactcctttc
ccgacgcaaagggtgtgctccaacccgccctgtgagacgcacgagacaggcaccacacac
acggccaccactgtcacctccaacatgagttccaatcaagaccccccaccacctgccggc
gaccagggagaggtggagagtacccagggtgacagtgtgaatatcgccagttccagtccc
atcacgacaacagtgtcctccacgctgacacgggctgtgaccaccgtgacacagtccacg
ccagtcccaggcccttcggtgccgaagatctcatctgtgactgagactgccccaggggct
ctgaccaccgaagtccccatcccggccacgattacagtgaccatagccaacacagaaact
tctgacatgcccttctctgctgttgacatcctgcagcccccagaggagctccaggcctcg
ccagggccgcgccagcagcttccgccacggcagctcctgcagcctgcctccgcgcccctg
gtgggggactccgccgaggtcctgtcagcctcccagagccctgagctccaggccgccgtg
gatctgagcagtacaggggacccgtcttcaggccaggagcctgccagctcggctgtggtg
gccactgtggtggtccagccaccgccacccacccagtctgaagtagaccagttgtccctc
ccccaagagctgatggctgaggcccaggcgggcaccaccaccctcatggtgacagggctc
accccagaggagctggcagtgactgctgctgctgaagcggctgcacaggccgcagccaca
gaggaggcccaggccctggccatccaggccgtgctccaggccgcacagcaggctgtcatg
gcaggcactggggagccgatggatacttcagaggcggccgcggcagtgacgcaggcagag
ctgagccacctgtcagccgagggccaggaaggccaggcaaccaccatccccatcgtgctg
acacaacaggagctggccgccctggtgcagcagcaacagctccaggaggcgcaggcccag
cagcagcagcaccacctgcccacagaagcgctggcccctgccgacagcctcaatgaccca
accatcgagagcaactgcctcaatgagctggccggagctgtgcccagcaccgtgggcctg
ctgccccccacggccaccgagagcctggccccgtccaacacattcgtggccccccagccg
gtcgttgtggccagccctgcaaagctgcaggccgcggccaccctgacggaagtggccaat
ggcattgaatccctgggcgtgaagccagacctgccaccgccacctagcaaagcccctgta
aagaaggagaaccagtggtttgacgtgggggtcattaagggtaccaatgtgatggtgaca
cactatttcctgccacccgaagatgctgtcccaactgatgatgactcgggcaccgtgccc
gactacaaccagctaaagaagcaggagctgcagccaggcaccgcatataagttccgcgtc
gccgggatcaatgcctgcggccgggggcccttcagtgagatctcagcctttaaaacatgt
ctgcctggcttcccgggggccccgtgtgccattaaaatcagcaaaagtccagacggtgct
cacctcacttgggagccgccctctgtgacctccggcaagatcatcgagtactcagtgtac
ctggccatccagagcgcgcaggctggcggcgagaccaagagctcgaccccggcgcagctg
gccttcatgcgggtgtactgtgggcccagcccctcctgcctcgtgcagtcctccagcctc
tccaacgcccacattgactacaccaccaagcccgccatcatcttccgcattgccgcccgc
aatgagaagggctatggcccagccacccaagtcaggtggttgcaagaaaccagtaaagac
agctctggcgccaagccggccagcaagcggcccatgtcgtctccggaaatgaaatccgcg
ccaaagaaatcgaaggcagacggtcagtga

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