Cervus canadensis (wapiti): 122434887
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Entry
122434887 CDS
T07554
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
122434887 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccad01009
]
122434887 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccad04515
]
122434887 (PCDH11X)
Protein phosphatases and associated proteins [BR:
ccad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122434887 (PCDH11X)
Cell adhesion molecules [BR:
ccad04515
]
Cadherins
Protocadherins
122434887 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
DUF6377
Drf_FH1
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
122434887
NCBI-ProteinID:
XP_043314619
LinkDB
All DBs
Position
X:84115585..85101205
Genome browser
AA seq
1346 aa
AA seq
DB search
MDLLSGTYIFAVLLACVVFQSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPDKSLTTP
MQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIIVDTRCFYEVEVAVLPDEIF
RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYQLIK
GQNIFGLDIIETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVA
DTNDNHPVFKEDEIEVSIPENAPVGSSVTQLHATDADIGENARIHFYFSNLVSSMAKRLF
HLNSTTGLITVKEPLDREESPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPLIDIRYI
INPINGTVVLSENAPLNTKIALITVTDKDADHNGRVTCFTDHEVPFRLRPVFSNQFLLET
AAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKLKDENDNAPVFTQSFISLSVPENNS
PGTQLTKISATDADTGRNAEIHYLLGIDAPSEFNLDHRTGILTAVKKLDREKQEKYSFTV
LAKDNGMPSLITNATVLVTVLDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYG
ENSAVTLSILDANDDFTIDPQTGVIRPNISFDREKQESYTFYVKAEDGGRVSHSSTAKVT
INVVDVNDNKPVFVVPPSNYSFELVPPSANPGTVVFTVVAIDNDTGMNAELRYSIVGGNT
KGLFMIDQTTGNITLKEKCVLADLGLHKLIVKAKDLGQPDSLFSVINVNLFVNESMTNAT
LIYELVRKNIETPVTQNIETTDTSSPSSDYVKIMVAIVAGTITVILVIFITAVVRCRQSP
HLKAAQKNKQNSEWVTPNPENRQMMMMKKKKKKKKHTPKNLLLNFVTIEEAKADDADNDR
NAVTLDLPIELEEQTMGKYNWGSTPTTFKPDSPDLARHYKSASPQPAFQIQPETPLNSKH
HIIQELPLDNTFVGCDSISKCSSSSSDPYSVSECSYPVTTFKTPVSVHTRLPMKEVVRSH
TPMKETTTVEIWTHPHPQRKSEGKKAVKSQRRVTFHLPEGSQESNSDGGLGDHDAGSLPS
TSHALPLGYPQEEYFDHAVNNNRTEGDGNSDPESTFIPGLKKAAEIAIQPTLEEASDNCT
QECLILGHSDTCWMPASLTHSSPSQAQASTVCHSPPLTQTTLRRRNPLVTQAVALCHSPP
MTQAIALCHSPPPAQTSALHHSPPLAQALRHSPPPAQASALYYSPPLAQAATIHCSPPLP
QPAALHRSPAQPPMGLQQGWGQGAGPEGLLSLDQGAQGSTRSQFYAMSERLHPSDDSIKV
IPLTTFTTGQQARPSMDDSPIMEEHP
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttgtccgggacgtatatatttgcggttttgttagcatgtgtcgtgtttcag
tctggcgcccaggagaagaactacaccattcgggaagaaatgccagaaaacgtcctcata
ggcgacttgctgaaagacctcaacttgtcgctaattccagacaagtctttaacaactcct
atgcaattcaagttagtatacaagaccggagatgtgccactgattcgaattgaagagggc
acaggtgagatcttcactactggagctcgcattgatcgtgagaaattgtgtgctggcatc
atagtggacacccgttgcttttatgaagtggaggttgccgttctgccggatgaaatattt
agattggttaaaatacgttttctgatagaagacataaatgataatgcaccattattccct
gcaacggttatcaatatatcaattcccgagaactctgctataaactctcgatatgctctc
ccagcggccattgatccagacacaggaataaatggagttcaaaactaccaactaattaag
ggtcaaaatatttttgggcttgatatcatagaaacgccagaaggagagaagatgccacaa
ctaatagttcaaaaggagttagatagggaagaaaaagatacatatgtaatgaaagtaaag
gttgaagatggtggctttcctcaaagatccagtactgctattttgcaagtcagtgttgct
gatacaaatgacaaccatcctgtttttaaggaggatgagattgaagtcagtataccagaa
aatgctcctgtaggttcttcagtaacacagctccatgccacagatgctgatataggtgaa
aatgccaggattcatttctatttcagcaatcttgtctccagcatggccaagaggctattt
cacctcaactctactactgggcttatcacagtaaaagaaccactggatagggaggagtct
ccaaaccacaagttactggttttggcaagtgatggtggattgatgccagcaagagcaatg
gtgctagtaaatgttactgatgtcaatgataatgtcccattgattgacataagatacatc
atcaatccaatcaatggcactgtggttctttcagaaaatgctcctctcaacaccaaaatt
gctctcataactgtgacagataaggatgctgaccataatggtagggtgacatgctttaca
gatcatgaagtccctttcagattaaggccagtgttcagtaatcagttcctcctagagact
gctgcatatcttgactatgagtccacaagagaatatgccattaaattactggccgcagat
gctggcaagcctcctttgaatcaatcatccatgctcctcatcaaattaaaagatgaaaat
gacaatgctccagttttcactcagtctttcataagtctttctgtccctgagaataactct
cctggtacccagttgacaaaaataagtgcaacagatgcagacactgggcgtaatgctgag
atacattacctgctaggcattgatgctccgtctgaattcaacctggatcatcgtacaggc
atcctgactgcagtgaagaaactggatagagaaaaacaggaaaaatattcattcacagtt
ctggcaaaagacaatgggatgccatctttaataaccaatgccacagtcttagtgaccgtt
cttgatcagaatgacaacagtccagttttcactcacaatgagtacaacttctatgtccca
gaaaaccttccaagacatggcacagtaggactaatcactgtaactgatcctgattatgga
gaaaattctgcagtaactctctccattttagatgcaaatgatgacttcacaattgatcca
cagactggtgtcatccgaccaaatatttcatttgatagagaaaaacaagaatcttatact
ttctatgtaaaggctgaggatggtggtagggtatcacattcttcaactgccaaagtcact
ataaatgtggtcgatgtcaatgacaacaaaccagtttttgttgtccctccttccaactac
tcctttgaattggttccaccatccgctaatccaggcacagtggtcttcacagtagtcgct
attgacaatgacactggcatgaatgcagagcttcgttacagcattgtaggagggaacaca
aaaggtctgtttatgattgaccaaacaacaggcaacattacactgaaggagaaatgtgtc
cttgcagatcttggtttacacaaactgatagtcaaagccaaggatttagggcaacctgat
tctctcttcagtgtcataaatgttaatctatttgtgaatgagtcgatgaccaatgctaca
ctgatttatgaattggtgcgcaaaaacattgaaacaccagtgacccaaaatattgagaca
actgatacatcctcaccatcaagtgactatgtcaagatcatggttgccattgttgctggc
accataactgtcattcttgttattttcatcactgctgtagtaagatgccgccaatcacca
catcttaaggctgctcagaaaaacaagcagaattccgaatgggttactccaaaccctgaa
aacaggcagatgatgatgatgaagaaaaagaagaagaagaagaagcatacccctaagaac
ttactgcttaactttgtcactattgaagaagctaaggcagacgatgctgacaatgataga
aatgccgtcacactagaccttcccattgaattggaagagcaaaccatgggcaagtacaac
tggggcagtacacctactactttcaagcctgacagccctgatttggcccggcactacaaa
tctgcctctccacagcctgctttccagatccagccggaaactcccctaaattcaaagcac
cacatcatccaggaactgcctcttgataacacctttgtgggctgtgattccatctccaag
tgttcctccagcagttctgatccctacagcgtttctgagtgcagctatccagtgacaact
ttcaagacccctgtgtctgtacacaccagactgccaatgaaggaagttgtacgatctcac
acacccatgaaagaaacaactactgtggagatctggactcatccccatccacagcggaaa
tccgaggggaaaaaagcagtaaagtcccagcggcgtgtcacatttcacctaccagaaggc
tctcaagaaagcaacagtgatggtggactgggagaccatgatgcaggcagccttcccagc
acatcccatgccctgccccttggctatcctcaggaggagtactttgatcatgctgtaaac
aacaaccgcactgaaggggatggcaactcggatcctgaatccactttcattcctggacta
aagaaagctgcagaaatagctattcaacctactctggaagaggcctctgacaactgcact
caagaatgtctcatcttgggccactctgatacctgctggatgccagcttctctgactcat
tccagcccttcacaggcacaggcctccactgtatgccacagccctcccctgacgcagaca
actcttcgccgacgcaaccctctggtgacacaggcagttgctctctgccacagccctcca
atgacccaggctatagcactatgccacagccctccaccagcacagacctctgctctccac
cacagcccacctctagcacaggctcttcgccacagccctccaccagcacaggcctcagcc
ctttactacagccctcccctggcacaggctgctacaatccactgcagtcctcctctgcca
cagcctgctgcccttcatcgcagccctgcacaaccaccaatgggtctgcagcagggttgg
gggcaaggtgctggccctgaaggactactttctcttgaccaaggagcacaaggtagtaca
agatctcagttttatgccatgtctgaaagacttcatcctagtgatgattcgattaaagtc
attcccttgacaaccttcactacaggccaacaggctagaccctctatggatgattctcca
attatggaagaacatccataa
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