Cervus canadensis (wapiti): 122435040
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Entry
122435040 CDS
T07554
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122435040 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122435040 (CSTF2)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
122435040 (CSTF2)
U7-dependent histone pre-mRNA processing factors
122435040 (CSTF2)
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
122435040
NCBI-ProteinID:
XP_043314818
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All DBs
Position
X:complement(94911010..94947296)
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AA seq
577 aa
AA seq
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MAGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGETIS
PEDAPESISKAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTNIPTLIAGNPQTVHSAGPGSGSSVSMNQQNPQAPQAQTLSGMHVN
GAPPLMQASLQAGVAAPGQIPATVTGPGPGSLAPGGGMQAQVGMPGSGPVSMERGQVPMQ
DPRAAMQRGPLPANVPTPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHVP
GHDSRGPPPHEMRGGPLTEPRPLMAEPRGPMIDQRGPPLDGRGGRDPRGIDARGMEARAM
EARGLDARGLEARAMEARAMEARAMEARAMEARAMEVRGMEARSMDTRGPVPGPRGPIPS
GIQGPSPINMGAVGPQGSRQVPVMQGAGMQGGSIQGGGQPGGFSPGQNQVTPQDHEKAAL
IMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttgactgtgagagaccctgcggtggatcgttctctacgttccgtgttcgtg
gggaacattccttatgaggctactgaagagcagttaaaggacatcttttctgaggttgga
cctgttgttagtttcaggttggtttatgatagggagacaggaaagccaaaaggttatggc
ttctgtgaataccaagaccaggagacagcacttagtgccatgcgaaacctaaatgggcgt
gaatttagtgggagagcacttcgagtggacaatgctgccagcgaaaagaacaaagaagag
ctgaagagccttggaactggtgcccctgtcattgagtcaccttatggagagaccatcagt
cctgaggatgcccctgagtccattagcaaagcagttgccagccttccaccagagcagatg
tttgagctgatgaaacagatgaagctctgtgtccagaatagtcctcaagaagcacgaaac
atgctgcttcagaaccctcaactggcttacgctttgctacaagcacaggtagtcatgaga
attgtggatccagaaattgccttgaaaattctgcatcgccagacaaatatccctacgctg
attgcaggcaaccctcagacagtccacagtgccggacctggctcaggatccagtgtgtcg
atgaaccagcagaatcctcaggcacctcaggcccagactttgagtggaatgcatgtcaat
ggcgcacctcctctgatgcaagcttccctgcaggctggagttgcagcaccagggcagata
ccagccactgtaacaggacctggccctggttccttagctcctggaggaggaatgcaggcc
caggttggaatgccaggaagtggaccagtgtccatggagcggggacaagtgccaatgcaa
gaccccagagcagctatgcagcgtgggcccttgcctgccaacgtcccaacgcctcgaggt
ctgttgggagatgctccaaatgacccacgcggaggcactttactttctgtaactggagag
gtagaacctagaggttacctgggaccacctcatcagggtccgcccatgcaccatgtccct
ggccatgacagccgtggcccacccccacatgagatgaggggagggccattaactgagccc
agacctctaatggcagagccaagaggacccatgatagatcagaggggtccacccttggat
ggcagaggtggaagagatccccgaggcatagatgcacgagggatggaggcacgagccatg
gaggctagaggattagatgctagaggattagaagcccgtgcaatggaggcccgtgcaatg
gaggcccgtgcaatggaggcccgcgctatggaggctcgtgcaatggaagtcagaggaatg
gaggccagaagcatggatacaaggggcccagtgccaggcccaagaggccctatacctagt
ggaatccaaggtcccagtccaattaacatgggggccgttggaccccagggatccagacag
gtcccagtcatgcagggagcaggcatgcaaggaggaagcattcagggtggaggccagcct
ggtggctttagtcctggccagaaccaagtcactccacaggaccatgagaaggctgctttg
atcatgcaggttcttcaactaactgcagaccagatcgccatgctgcctcctgagcagagg
cagagtatcctgatcttaaaggaacaaatacagaaatctactggagctccttaa
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