Cervus canadensis (wapiti): 122435067
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Entry
122435067 CDS
T07554
Symbol
NXF3
Name
(RefSeq) nuclear RNA export factor 3 isoform X1
KO
K14284
nuclear RNA export factor
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03008
Ribosome biogenesis in eukaryotes
ccad03013
Nucleocytoplasmic transport
ccad03015
mRNA surveillance pathway
ccad05014
Amyotrophic lateral sclerosis
ccad05164
Influenza A
ccad05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122435067 (NXF3)
03015 mRNA surveillance pathway
122435067 (NXF3)
03008 Ribosome biogenesis in eukaryotes
122435067 (NXF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
122435067 (NXF3)
05168 Herpes simplex virus 1 infection
122435067 (NXF3)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122435067 (NXF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122435067 (NXF3)
03009 Ribosome biogenesis [BR:
ccad03009
]
122435067 (NXF3)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122435067 (NXF3)
mRNA cycle factors
Stress granule specific factors
122435067 (NXF3)
Ribosome biogenesis [BR:
ccad03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122435067 (NXF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
Tap-RNA_bind
LRR_NXF1-5
NTF2
Trans_reg_dom
Stm1_N
Motif
Other DBs
NCBI-GeneID:
122435067
NCBI-ProteinID:
XP_043314878
LinkDB
All DBs
Position
X:complement(89381484..89391388)
Genome browser
AA seq
526 aa
AA seq
DB search
MGQMGSDTPVLIAEHSDKLNPLQRRARSWRFLRRRHNYSSEHVTSQQQQDNDSGDVPMDV
QARYAPYAVPPHHQRSSFQKQDQMHIKMETKQKPPERKMERNRQDETLGSWFKIIIPFGV
KYDEKWLLNLIQKQCSVSFIPVEFHYEKMQAQFFVENASIACALKNVNGKIFNEDNEKIF
IFVEPCDAPPSVQKALKSEKVEQMKLSSLDQSNKKPYMVHSLSTIMDNASHTKNLNLSNT
EVKSAGEMDKGQQLEPQGMWVDRNAMCTTSPDKSTNISTILELFPRLLSLDGQETPSGLK
CAIEVPKCLPTCKGSFFGSDELKSLIMQFLQQYYLIHDYGDRQGLLCAYHEEACFSLTIP
FHLKDPGPSSMCAYFKNSRNMKKLKDPNLRFQLLKHTKCDIVHALCGLPKTQHDFRSFMV
DMWFQTESMLCFSVNGVFKEVEGRSPGCVRAFTRTFITTPATPSSFCIVNDKLFVSDFSP
KKTEPVLFIPKPEPSVNSMPTFSLEQQEIVQDFSIQSGMNFQQSQK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgggccaaatgggctctgacacacccgtcctgattgcagagcactctgataaactgaac
cctttacaaagaagagcacgaagctggaggtttttacgaaggcgacacaactattcgtct
gaacatgtcacttcccagcagcagcaagataatgattcaggtgatgttcccatggacgtc
caagcaagatatgctccctatgctgttccaccccatcatcagagaagcagttttcagaaa
caagaccaaatgcatattaagatggagacaaagcaaaagcctccagagagaaaaatggag
agaaacagacaggatgagaccttggggagctggttcaagatcataattccctttggtgta
aaatatgatgagaagtggctgctgaatttgattcagaagcaatgcagtgtctccttcatt
ccagtcgaatttcactatgagaaaatgcaggcccagttctttgtagagaatgccagcatt
gcctgtgcattgaagaatgtcaatggcaagattttcaatgaggataatgaaaagatattt
atctttgttgaaccctgtgatgcacccccatctgtgcagaaggcactgaagtctgaaaag
gtggaacagatgaagctttcatccttggaccagagcaacaaaaaaccctacatggtgcat
agcctgtccaccattatggataatgcttcccacaccaagaacttgaatctctccaacact
gaggtgaagtctgctggggagatggacaagggtcaacagctggaaccacaagggatgtgg
gttgacagaaatgccatgtgcaccacctcccctgataagtcaaccaacataagcaccatc
ctggagttgttccccaggttactaagcttggatggccaggagacaccctcagggcttaag
tgtgctattgaagtccccaaatgcttaccaacatgcaagggaagcttctttggatctgat
gagctgaagagtctaatcatgcaattcctgcagcagtattacttgatccatgactatggg
gaccgccagggactcctgtgtgcttatcacgaggaggcctgcttctccctgaccattcca
ttccacctcaaggacccgggcccaagcagcatgtgtgcatacttcaagaacagcaggaat
atgaagaagctcaaggaccccaatctgcggttccagctgctgaaacacacaaaatgtgac
attgtgcatgccctctgtgggttgcccaaaactcagcatgacttcaggtccttcatggtg
gacatgtggttccagacggaatcaatgctctgcttctctgtgaatggggtgttcaaggaa
gtagaaggaaggtctcctggctgtgtgcgtgccttcacccggactttcatcactacccct
gccaccccttccagtttttgtattgtgaatgataagctgtttgtgagtgacttcagcccc
aagaagactgagcctgtgctcttcatcccaaagcctgaaccctctgtcaactccatgccc
accttctccttggagcaacaggaaatagtgcaggatttctccatccagtctgggatgaac
ttccagcagtctcaaaagtga
DBGET
integrated database retrieval system
