Cervus canadensis (wapiti): 122435076
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Entry
122435076 CDS
T07554
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccad04990
]
122435076 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
ccad04990
]
Other domain-containing proteins
Patched domain-containing proteins
122435076 (PTCHD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
122435076
NCBI-ProteinID:
XP_043314891
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All DBs
Position
X:26313542..26367843
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AA seq
888 aa
AA seq
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MLRQVLHRGLRTSFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQH
SLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVIVTSFQKANMLDQHHTDLILKLHA
AVTRIQVPRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKNARATNRTNFAITYPITHL
KDGRAVYNGHQLGGVTVHSKDRVKSAEAVQLTYYLQSINSLNDMVAERWESSFCDTVRLF
QKSNSKVKMYPYTSSSLREDFQKTSRVSERYLVTSLILVVTMAILCCSMQDCVRSKPWLG
LLGLVTISLATLTAAGIINLTGGKYNSTFLGVPFIMLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEALQEKPAWYRFLLTARFSEDTADGEEANTYES
HLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALMGYLQVSEGSDLSNIVATATQTIE
YTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNV
STGLPKKNFTDMLRNSFLKAPQFSHFQEDIIFSKKYNDEVDVVASRMFLVAKTMETNREE
LYDLLETLRRLSVTSKVKFIVFNPSFVYMDRYASSLGAPLHNSCISALFLLFFSAFLVAD
SLINVWLTLTVVSVEFGVIGFMTLWRVQLDCISVLCLIYGINYTIDNCAPLLSTFVLGKD
FTRTKWVKNALEVHGVAILQSYLCYLVGLIPLAAVPSNLTCTLFRCLFLIALVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDIDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaggtcctacacaggggcttgaggacgtctttctcccggctcggccacttc
atagccagtcaccctgtcttcttcgcctcggcgccggtgctcatctccatcctgctcggc
gccagcttcagccgctaccaggtcgaggagagcgtggagcacctgctggcgccccagcac
agcctcgccaagatcgagcgcaacctcgtcaacagcctcttcccggtcaaccgctccaag
caccggctgtactcggacctgcagacccctgggcgctacggccgggtcatcgtcacctcc
ttccagaaagccaacatgctggaccagcatcacaccgacctgatcttaaagttgcatgct
gctgtgaccaggatccaggttccaaggcctggatttaattacacatttgctcacatctgt
atcctgaataacgataagacttgcattgtggacgacatcgtgcatgtcctagaggagcta
aagaatgctcgggcgaccaaccggaccaattttgctatcacgtacccgatcactcactta
aaagatgggagggcagtttataacgggcaccagctgggaggcgtcactgtgcacagcaag
gatcgcgtgaaatctgcagaggccgtccagctcacctactacctgcagtccatcaacagt
ctcaacgacatggtggcagagaggtgggagtccagcttctgtgacaccgtccgactgttc
cagaaatctaacagcaaagtcaaaatgtacccttacacatcctcctcgctgagggaagac
ttccagaagaccagccgtgtatcggaacgctacctggtcaccagcctgatcctggtggtc
accatggccatcctctgctgctccatgcaggactgcgtccgcagcaaaccctggttgggc
ctgctcgggctggtgaccataagcctcgccaccctcaccgcggctgggatcatcaatctg
actggtgggaaatacaattccaccttcctgggagtccctttcatcatgctaggtcatgga
ttatatgggacttttgaaatgttatcctcctggaggaaaactagagaagaccaacatgtt
aaagagagaactgcagcagtctatgcagactccatgctctccttttctctcaccactgcc
atgtacctggtcaccttcggcataggggccagccctttcacgaacattgaggcagccagg
attttctgctgcaattcctgtatcgcaattttcttcaactacctctatgtactctcgttt
tatggttccagcctggtattcactggctacatagaaaacaattaccagcatagtatcttc
tgtaggaaagtcccaaagcctgaggcattgcaggagaagccggcatggtacaggtttctc
ctgacggccaggttcagcgaggacactgcggacggtgaggaagcgaacacttacgagagt
cacctattggtatgtttcctcaaacgctattactgtgactggataaccaacacctatgtc
aagccttttgtagttctcttttaccttatttatatttcctttgccttaatgggctatctg
caggtcagtgaagggtcagaccttagtaacatcgtagcgacggcgacgcaaaccattgag
tacactactgcccagcaaaagtactttagcaactacagtccggtgattgggttttacata
tacgagtctatagaatactggaacactagtgtccaagaagacgtgctagaatacaccaag
gggtttgtgcgaatatcctggtttgagagctacttaaattaccttcggaaactcaatgtg
tccactggcttgcctaagaaaaacttcacagacatgttgagaaattccttcctgaaagcc
ccccaattttcccattttcaagaggacataatcttctctaaaaagtataatgatgaggtt
gacgtagtggcctccagaatgttcttggtggccaagaccatggaaacaaacagagaagaa
ctctatgatctcctggagaccctgaggagactttctgtcacctccaaggtgaagttcatt
gtcttcaacccgtccttcgtgtacatggatcgatacgcctcctccctgggagcccccctg
cacaactcctgcatcagtgctttgttcctgctcttcttctcggcattcctggtggcagac
tctctgattaacgtctggctcactctaacggttgtgtccgtggagtttggagttataggt
ttcatgacattatggagagtgcaactggactgcatttctgtgctatgcttaatatatgga
attaactatacaattgacaactgtgctccactcttatccacctttgttctgggcaaggat
ttcacaagaacgaagtgggtaaaaaatgccctggaagtgcatggggtagcaattttacag
agttacctctgctatcttgttggtctgattcctcttgcagctgtgccttcaaatctgacc
tgtacactgttcaggtgcttgtttttaatagcgttggtcaccttctttcactgctttgcc
attttacctgtgatactgactttcctgccaccctctaagaaaaaaaggaaagagaagaaa
aatcctgaaaaccgggaggaaattgagtgtgtcgaaatggtggatatcgatagcacccga
gtggttgaccaaattacaacagtgtga
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