Cervus canadensis (wapiti): 122435090
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Entry
122435090 CDS
T07554
Symbol
CHD1L
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccad03036
]
122435090 (CHD1L)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122435090 (CHD1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
SWI2_SNF2
AAA_22
Torsin
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
122435090
NCBI-ProteinID:
XP_043314918
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All DBs
Position
2:complement(21048561..21119803)
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AA seq
898 aa
AA seq
DB search
MERAGAATPEGDMPGFLLALQSESRAEAPRARVQEQDLRQWGLTGIHLRPYQLQGVNWLA
QCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLSVLSNWKEEMERLA
PGLSCVVYAGDKDKRACLQQDLKQESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHR
LKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYALLSFVEPDLFSKEQVEDFVQRYQ
DIEKEPESASELYKLLQPFLLRRVKAEVATELPRKTEVVIYHGMSALQKKYYKAILMKDL
DAFENEMAKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASGKLHLLDKLLAF
LYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQQPIFTFL
LSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEI
VYRKAASKLQLTNIIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLSSEGSTMDEIDL
ESILGETEDGHWVSDALPTTAEEGSREPEEGKNHMYLFEGKDYSKEPSKEDRESFEQLVN
LQKTLLEKTSQEGRLLRNKGSVPIPGLVEGSTKRKRILSPEELEDRRKKRQEAAAKRKRL
LEEKRKKKEEAEHKKKMAWWESNNYQSFCLPSEESEPEDGEDESSAQLEYEDPDSTSIKY
VSGDVTHPQAGAEDAVIVHCVDDSGRWGRGGLFTALETRSAEPRKRYELAGKMKDLSLGG
VLLFPIDDKESRNEGQDLLALIVAQHRDRTNVLSGIKMAALEEALKKIFLAAKKRKASVH
LPRIGHATKGFNWYGTERLIRKHLASRGIPTYIYYFPRNKAAVLHLQASSSSSGQLVS
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtgcgggcgccgcgacccccgagggcgacatgcccggctttcttctggctctt
cagagcgagagccgagccgaggcgccgcgggcgcgggtgcaggagcaggacttgcggcag
tggggcctcacagggatacatctacgcccttatcagctgcagggagtcaactggctagcc
cagtgcttccactgtcagaatggctgcatcctgggggatgagatgggcttgggtaagacc
tgccagactattgcactcttcatttatttggcgggaagattaaatgatgaaggaccattt
ctgattctttgtcccttgtctgttttgagcaactggaaagaagagatggagagacttgct
ccaggtctttcctgtgtagtatatgccggtgacaaggacaagagagcctgcctacagcaa
gacctgaagcaggagtcgcgttttcatgtgttgctaactacctatgagatttgcttgaaa
gatgcatcttttctaaagtccttcccttggagtgttcttgttgtggatgaagctcacagg
ttgaaaaaccaaagctccttgctgcataagactctttcagagttctcagttgtcttcagc
ctcctgctgactggaacacccatccagaacagcctccaggagctctacgcactcctcagt
tttgtggagcctgatctcttttccaaggagcaggtggaagattttgttcagcgttaccag
gacattgagaaagagcctgagtcagcaagtgagctatacaaactcttgcagccatttctg
ctgaggcgagtaaaggctgaggtagccacagagcttcccaggaagacggaagtagtgata
taccacggcatgtcagcactgcagaaaaaatactacaaggccattctgatgaaagaccta
gatgcatttgaaaatgagatggcgaagaaagttaaacttcagaatgtcctgtcccagctt
cggaagtgtgtggatcacccgtatttgtttgatggtgtggaaccagagccttttgaaatt
ggagaccacctgattgaggctagcgggaaacttcacctgctggataaactgttggcattc
ctgtattccaaaggccatcgagttttacttttctcccagatgacccagatgttggatatt
ctccaagactacctggattatagaggctacagctatgagcgtgtggatggttctgtgaga
ggagaagagagacacttggccattaagaactttggacagcagcccatctttacttttctc
ttgagtaccagggcaggtggagttggcatgaacttaacggcagcagatactgttattttt
tttgacagtgatttcaatcctcagaatgacttgcaagcagctgcccgggctcaccgaatt
ggccagaacaagtctgttaaagttattcggctgattggccgagacactgtggaagagatt
gtctataggaaagcggcctccaaactgcagctcaccaacataatcatcgaagggggccat
ttcactctgggagcccagaaacctgctgcggatgccgacctccagttgagcgagatactc
aaatttggtttggataaactgctgtcctcagaggggagcaccatggatgaaatagacctg
gagtctatcctgggagaaacagaagatggccattgggtctctgatgccctgcctactaca
gcagaagaaggaagcagagagccagaggaaggaaaaaaccacatgtacttatttgaaggt
aaagattattctaaggagcctagtaaagaagacagagaatcatttgagcaactggtgaat
cttcagaaaacccttttggagaagactagtcaagagggccggttactccgaaataaaggc
agtgttcctatcccaggccttgtggaggggtccaccaaaaggaagcggattctgagccca
gaagaactggaggacagaaggaagaaaagacaagaagcagcggccaagagaaagagactg
ttagaggagaagaggaagaagaaggaagaagcagaacataagaaaaagatggcctggtgg
gagtccaacaattaccagtccttctgtctgccttctgaggagagcgaaccagaggacggg
gaagatgagagctctgcccaactggagtatgaggacccagactcaacctccatcaagtat
gtcagcggtgacgtcacccacccccaggctggggcggaggatgctgtcattgtgcactgc
gtagatgactctggtcgctggggcagaggtggtttattcacagctctggaaacaagatct
gctgagccaagaaaaagatatgagttggctgggaaaatgaaagatttgagtttgggaggt
gtccttttatttcctattgatgataaagagtcaagaaacgaagggcaagatttgttggcc
ttgattgtggcccagcaccgagatcgcaccaatgtcctgtctggcattaagatggcagcc
ctagaagaggccctgaagaagatatttttagcagcaaagaaaaggaaagcaagtgtccat
cttccacgcattggacatgccacgaaaggttttaactggtatggtactgagcgacttatt
aggaaacacttggcctcaagaggcatcccaacttacatctactattttcctagaaacaaa
gctgctgtccttcatctacaggcctcatcttcatcctcaggacagctagtatcttaa
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