Cervus canadensis (wapiti): 122435105
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Entry
122435105 CDS
T07554
Symbol
SOX3
Name
(RefSeq) transcription factor SOX-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122435105 (SOX3)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122435105 (SOX3)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122435105
NCBI-ProteinID:
XP_043314940
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Position
X:109670227..109671721
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AA seq
453 aa
AA seq
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MRPARDHASGASSLLGPADLARTTAASLPFPPDPRAQRPPSAPPTESPGLFTVAAPAPGA
PSPPATLAHLLPAPAMYSLLETELKNPVGPPTPAAGAGGPAAPGGAGKSSANAGGGANAG
GGSSGGASAGGGGGGGGGGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEIS
KRLGADWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLL
PPGAAAAAAAAAAAAAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLGYAPPATMSSPP
PPPALPQMHRYDMAGLQYSPMMPPGAQSYMNAAAAAAAASGYGSMAPSAAAAAAAAYGQQ
PAAAAAAAAAAMSLGPMGTVVKTEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAAD
AASPLPGSRLHSVHQHYQGAGTAVNGTVPLTHI
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctgcccgagaccacgcatcaggtgccagcagcctgctgggtcccgctgacttg
gcgcggaccactgcggccagcctgcccttcccgcccgacccgcgggcccagcggccccca
agcgcccctccgacggagtccccgggccttttcaccgtggccgctccagcgccgggagcg
ccttctcctcccgccaccctggcgcaccttcttcccgccccggccatgtacagcctgctg
gagactgaactcaagaacccagtggggccacccaccccagcggcaggcgcgggcggcccg
gcagccccgggtggcgcaggcaagagtagtgcgaacgccggcggcggcgcgaacgcaggc
ggcggcagcagcgggggcgcgagcgccgggggcggcggtgggggcggcggcggcggcggc
ggcgggggcagcgatcaggaccgcgtgaagcggcccatgaatgccttcatggtgtggtcc
cgcgggcagcggcgcaagatggccctggagaaccccaagatgcacaactccgagatcagt
aagcgcttgggcgccgactggaaactgctgacggacgccgagaagcggccgttcatcgac
gaggccaagcggctgcgcgcggtgcatatgaaagagtacccggactacaagtaccggccg
cgccgcaagaccaagacgctgctcaagaaggacaagtactccctgcccggcggcctgctg
ccccccggcgccgccgccgcggccgcggccgccgccgccgccgcggccgccagtagcccg
gtgggcgtgggccagcgcctggacacgtacacacacgtgaacggctgggccaacggcgcg
tactcgctggtgcaggagcagctgggctacgcgccgcccgcgaccatgagcagcccgccg
ccgccgcccgcgctgccgcagatgcaccgctacgacatggccggcctgcagtacagcccc
atgatgccgcccggcgcccagagctacatgaacgccgcggccgccgccgccgccgcctcg
ggctacgggagcatggcgccctccgccgccgccgccgccgccgccgcctacgggcagcag
cccgcggccgccgccgccgccgccgccgccgccatgagcctgggccccatgggcacggtg
gtgaagacggagcccagctcgccgccccccgccatcgcgtcgcactcgcagcgagcgtgc
ctcggcgacctgcgcgacatgatcagcatgtacctgccgcccggcggggacgcggcggac
gccgcctcgccgctgccgggcagccgcctgcatagcgtgcaccagcactaccagggcgcc
gggactgccgtcaacggcacggtgccgctgacccacatctga
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