Cervus canadensis (wapiti): 122435409
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Entry
122435409 CDS
T07554
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122435409 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122435409 (ATRX)
03036 Chromosome and associated proteins [BR:
ccad03036
]
122435409 (ATRX)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
122435409 (ATRX)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122435409 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
122435409
NCBI-ProteinID:
XP_043315490
LinkDB
All DBs
Position
X:32249875..32514271
Genome browser
AA seq
2485 aa
AA seq
DB search
MYISKNREVTIESKLNTLVQKLHDFLAHSSEESEETSSPPRLVMNQSTDKVSGSGNNSDM
MENSREEGASSAEKSKSSGSSRSKRKPSIVTKYVESDDEKPLDETVNEDASNENSENDIT
MQSLPKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVSCTACGQQ
VNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHN
AFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKKK
IKVDNEKSSKVYDHAPRFSPKKNSPNCNGEEKKLDDSYSGSVTYSYSALIVPKDMIKKTK
KLIETTANMNSSYVKFLKQATDNSEINSATKLRQLKAFKSVLADIKKAHLALEEDLNSEI
QALDAVNKEKNTKEHKVIDAKSETKVRKGEKPCVLERKDISKSEGKLSRKQVDSEHVGQS
VAVEEQRAHKNASTEYKKSDKKEPQYEPTNTSEDLDMDIVSVPSSVPEDIFENLETAMEF
QSSADYQGDGNSGTEQELETSVKLNITSKDNRGGIKSKTTAKVTKELYVKLTPVSLSISP
IKGADCQEVPQDKDSYKSSCLNPKPENCEPGQEKNDNEHLAKSEVPLLSEESDLRRSPRV
KTTPLRRQTENNRTISNSDEENNETVKEQQKLSVPMRKKDKRNSSDSAIDNPKPNKLPKS
KQSEIVDHISDSDEMLAILKDVPSVSHSSSDTDINEPHTNNEKTFYSKIQRGKDDKRKRK
RKSSTSGSDFDIKKGKSVKKAIISKKKRQNQSESSNYDSELEKEIKSMSKIGTARTTKKR
VPNKEDYDSSEDEKHSKKGMDDQGHKSLRTAQEGSSDDAERKQERENFSSAEGTVDKDKT
IMELRDRLSKKQQPNVSSESADKLCSGKEESFNSPEDKMVAESKGKSKHQRTRMCKKILG
GLCDVAEKFSEKEQSDESSEDDNEQSKKAIEEKEKKTADLNKKVIKMEQEYESSSDSTEK
LPEGEEICHFPKSVKQNKSSANGEKKCKKIKDKASKKKGELPDNSEKLPGKREGCDSSED
KRSKNGTSSREKKRFNLPEKSSRKRQDCSSSDTEKYSMKEDGCDFSDKRPKRIELRERRN
LNSNRNSKEVQSGSSSSDVEESSEDNKNLKKQRASAKKKAGSMKEKMRNSLRTSTKRKQA
DITSSSSSDIGDDDQKSVGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVTV
DDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDESEEGKKRTGKHNEENLGDEEVKNQ
ANSESDSDSEESKKPRYRHRLLRHKLTLSDGESGEEKKMKPKEHKEAKGRNRRKVSSEDS
EDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENK
SNSEEDKEEDEEDDEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRI
AEREREREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDG
VQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCP
LNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYR
NLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILT
GTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHIL
YEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGK
AGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDDY
TKKKKAKGKKGKKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGNVDETGNNPSVSLKLEES
KATSSNPSSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISL
DLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETN
VRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLA
QGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRD
TPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTM
RFNIPTGTNLPPVSFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAVRI
QPLEDIISAVWKENMNLSEAQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQR
ILMNRRLQQQYNQQQQQQMTYQQATLGHLMMPKPPNLIMNPSNYQQIDMRGMYQSVAGGM
QPPPLQRAPPPMRSKNPGPSPGKSM
NT seq
7458 nt
NT seq
+upstream
nt +downstream
nt
atgtacatatcaaaaaatagagaagttaccatcgaaagcaagttgaatacattggtgcag
aagcttcatgactttctggcacactcatcagaggaatctgaagaaacaagttctcctcca
agacttgtgatgaaccaaagcacagataaagtcagtgggtctggcaataactctgatatg
atggaaaacagcagggaagagggagctagctctgcagaaaaatccaaatcatcaggatca
tcacgatcaaagaggaaaccttcaattgtaacaaagtatgtagaatctgatgatgaaaaa
cctttggatgaaactgtaaatgaagatgcttctaatgaaaattcagaaaatgatattact
atgcaaagcttgccaaaaggtacagtgattgtacaaccagagccagtgctgaatgaagac
aaagatgattttaaagggcctgaatttagaagcagaagtaaaatgaaaactgaaaatctc
aaaaaacgcggagaagatgggcttcatgggattgtgagctgtacagcttgtggacaacag
gtcaatcattttcaaaaagattccatttatagacatccttcactgcaagtacttatttgt
aagaattgctttaaatattacatgagtgatgatattagccgtgactcagatggaatggat
gaacagtgtagatggtgtgcagaaggtggaaacttaatttgttgtgacttttgccataat
gccttctgtaagaagtgcattcttcgcaaccttggtcgaaaggagctgtctacaataatg
gatgaaaacaaccagtggtattgctacatttgtcacccagagcctttgttggacttggtc
acggcatgtaacagcgtgtttgaaaacttagaacagttgttgcaacaaaataagaagaag
ataaaagttgacaatgaaaagagtagtaaagtatatgatcatgcacccagattttctcca
aagaaaaacagtccaaattgtaatggagaagaaaagaagttagatgattcatattctggt
tctgtaacctactcttactcagcactaattgtgcccaaggacatgattaagaagacaaaa
aaactgattgagactactgccaacatgaattccagttacgttaagtttctgaagcaggca
acagataattcagaaatcaattccgctacaaagttacgtcagcttaaggcttttaagtct
gtgttggctgatatcaagaaagctcatcttgcattagaagaagatttgaattcagagatt
caagctttggatgctgtaaacaaagagaaaaataccaaagagcataaagtcatagatgct
aagtctgaaacaaaagtaagaaaaggagaaaaaccttgtgttttggaaaggaaggatatt
tcaaaatcagaaggtaaactgtcaagaaagcaggtagatagtgagcatgtgggtcagagt
gttgcagtagaggaacaaagagcacataaaaatgccagtactgaatataagaaatctgat
aaaaaagaacctcagtatgaacctactaacacttctgaagacttagacatggatattgtg
tctgttccttcctcagttccagaagacatttttgagaatcttgagactgctatggagttt
cagagttcagcagattatcagggagatggcaacagtggaactgagcaagaactggagact
tctgtaaaattaaatattacttcaaaagacaacagaggaggtattaaatcaaaaacaaca
gctaaagtaacaaaagaattatatgttaaactcacccctgtttccctttctatttcccca
attaaaggtgctgattgtcaggaagttccacaagataaagatagctataaaagttcttgt
ctgaaccctaagccagagaactgtgaacctggacaggaaaagaatgataatgagcatttg
gctaaaagtgaagttccgttactttcagaagaatctgatcttcgaagatccccacgtgta
aagactacacctttgaggcgacagacagaaaacaaccgtacaatatctaattcagatgaa
gaaaataatgaaacagttaaggagcagcaaaaactttcggtcccaatgagaaaaaaggat
aagcggaattcttctgacagtgctatagataatcctaaacctaataaattgcctaaatct
aagcagtcagagattgtggatcacatttcagattctgatgaaatgctggcaatcctcaaa
gacgtgcccagtgtgagtcacagttcttcagatactgatattaatgaacctcatacaaat
aatgagaagactttttattcaaagattcaaagagggaaagatgataaaagaaaaaggaaa
cgaaaaagttctacttctggctcagattttgatattaagaaaggtaaatcagttaaaaag
gctataatttctaaaaagaaacggcaaaaccagtctgaatcttctaattatgactcagaa
ttagaaaaagagataaagagtatgagtaaaattggaactgccagaacaaccaagaaaaga
gttccaaataaagaagattatgattcttctgaagatgaaaaacacagcaaaaaaggaatg
gatgatcaaggtcataaaagtttgaggactgcacaggaaggatcatctgatgatgctgaa
aggaaacaagagagagagaatttctcttcagcagaaggcacagttgataaagacaagacc
atcatggaattgagagatcgcctctctaagaagcagcagcccaatgtttcctcagagagc
gctgataagctttgttctgggaaagaggagagttttaattctccagaagataaaatggtt
gctgaatctaaaggaaagagtaagcaccagcgaaccagaatgtgtaagaaaatactgggt
ggcttatgtgatgttgctgagaagttctcagagaaagaacagagtgatgaatcctctgaa
gatgataacgagcagagcaaaaaggcaattgaagaaaaagaaaagaaaactgcagacttg
aataaaaaagtaattaagatggagcaagagtatgaatcatcatctgatagtactgagaaa
ttacctgagggagaagaaatttgtcactttcctaaaagcgtaaaacaaaataagagctca
gctaatggggaaaagaaatgcaaaaaaataaaagataaagcttctaaaaagaagggtgaa
ttacctgataattctgagaagttaccagggaaaagagaaggttgtgactcttccgaagat
aagaggagtaagaatggaacatccagtagagagaagaaaaggttcaacttgcctgaaaag
agttcgaggaagagacaggattgttcatcatctgatactgaaaaatattccatgaaagaa
gatggttgtgatttttctgataagagaccaaaaagaatagaattaagggaaagaaggaat
ttaaattcaaatagaaatagcaaggaagtacaaagtggctcatcatcttctgatgttgag
gaaagttctgaagataataaaaacctgaagaaacaaagagcttcagctaaaaagaaggca
ggcagtatgaaggagaaaatgagaaactccctgagaacaagcactaaaagaaagcaggct
gacattacttcctcatcttcttctgatataggagatgatgatcagaaatctgtaggtgag
ggcagcagtgatgagcagaaaattaagcctgtgactgaaaatttagtgctgtcgtcacat
actggattttgtcaatcgtcaggagacgaagccttatctaaatcagtgcctgtcacagtg
gatgatgacgatgatgacaatgatcctgaaaatagaattgccaagaagatgcttttagaa
gaaattaaagccaatctttcctccgatgaggatggatcttcagatgagtcagaagaaggg
aagaaaagaactggaaaacacaatgaagaaaaccttggagatgaggaagtaaaaaatcaa
gccaattctgaatcagattcagattctgaagaatctaagaagccaagatacagacatagg
cttttgagacacaagctgactctgagtgatggagaatctggagaagaaaaaaagatgaag
cctaaagagcacaaagaagccaaaggcagaaatagaaggaaggtgagtagtgaagattct
gaagattctgattttcaggaatctggagttagtgaagaagttagtgaatctgaagatgaa
caacggcccagaacaaggtctgcgaagaaagcagagttggaagaaaatcagagaagttac
aaacagaagaagaaaaggcgacgcattaaggttcaagaagactcatccagtgaaaacaag
agcaattctgaagaagataaagaagaagatgaagaagatgatgaagaagaagatgaaaat
gatgattccaagtctcctggaaaaggcagaaagaaaattcggaagattcttaaagatgat
aagctaagaacagaaacacaaaatgctcttaaggaagaagaagagaggcgaaaacgtatt
gctgagcgagagcgagagcgagagaaattgagagaggtgatagaaattgaagacgcttca
ccgactaagtgtccaataacaacgaagttggttttagatgaagatgaagaaaccaaagaa
cctttagtgcaggttcatagaaatatggttatcaaattgaaaccacatcaagtagatggt
gttcagtttatgtgggattgctgctgtgaatctgttaaaaaaacaaagaaatctccaggt
tcaggatgcattcttgcccactgcatgggccttggtaaaactttacaggtggtaagtttt
cttcatacggttcttttgtgtgacaaattggatttcagcacagctttagtggtttgtcct
cttaatactgctttgaattggatgaatgaatttgagaagtggcaggagggattaaaagat
gatgagaagcttgaggtctctgaattagcaactgtgaaacgtcctcaagaaagaagctac
atgctacagaggtggcaagaagatggtggtgttatgatcataggctatgagatgtacaga
aatcttgctcaaggaaggaatgtgaagagtaggaaacttaaagaaatatttaacaaagca
ttggttgatccaggacctgactttgttgtttgtgatgaaggccatattctaaaaaatgaa
gcatctgctgtttcaaaagctatgaattctatacgatcaagaaggaggattattttaacg
ggaacaccacttcaaaataacctaattgagtatcattgcatggttaactttatcaaagaa
aatttgcttggatccattaaggaattcaggaatcggtttataaatccaatccaaaatggt
cagtgtgcagattctaccatggtagatgtcagagtaatgaaaaaacgtgctcacattctc
tatgaaatgttagctggatgtgttcagaggaaagattatacagcattaacaaagtttttg
cctccaaagcatgagtatgttttagctgtgagaatgactcctattcagtgcaaactctat
cagtactacttagatcacttaacaggcgtaggtaatagcagtgaaggcggaagaggaaag
gcaggtgcaaaacttttccaagattttcaaatgttaagtagaatctggactcatccatgg
tgtttgcagctggactacattagtaaagaaaacaagggatattttgatgaagacagtatg
gatgaatttatagcttcagattccgatgaaacctccatgagtttaagctctgatgattat
acaaaaaagaaaaaagcaaaggggaaaaagggaaaaaaagatagtagctcaagtggaagt
ggcagtgacaatgatgttgaagtgattaaagtctggaattcaagatctcgaggaggtggt
gaaggaaatgtggatgaaacaggaaacaatccctcagtttctttaaaactggaagaaagt
aaagctacttcttctaatccaagcagcccagctccagactggtacaaagattttgttaca
gatgctgatgctgaggttttagagcattctggaaaaatggtacttctctttgaaattctt
cgaatggcagaggaaattggggataaagtccttgttttcagccagtctctcatatctctg
gacttgattgaagattttcttgaattggctagtagagagaagacagaagataaagataag
cctctcatttataaaggtgaagggaagtggctcagaaacattgactattaccgtttagat
ggctctacaactgctcagtcaaggaaaaaatgggctgaagaatttaatgatgaaactaat
gtgagagggcgattatttatcatttccaccaaagcaggatctcttggaattaatctggta
gctgctaatcgagtgatcatatttgatgcctcttggaatccatcttatgacatccagagt
atattcagagtttatcgctttggacaaactaaacctgtgtatgtatataggttcttagct
cagggaaccatggaagataagatttatgatcgacaagtaactaagcagtcactgtctttt
cgagttgttgatcaacagcaagttgaacgtcattttaccatgaatgagctgactgaactt
tatacttttgagccagacttgttagatgaccctaattcagaaaagaagaagaaaagggat
actcccatgctgccaaaggacaccatacttgcagaacttcttcaaatacataaagaacac
attgtaggatatcatgaacatgattctcttttggaccacaaagaagaagaagagttgact
gaagaagaaagaaaagcagcttgggctgaatatgaagcagagaagaagggactgaccatg
cgtttcaacataccaactgggaccaatttaccccctgtcagttttaactctcaaactcct
tatattcctttcaatttgggagccctatcagcaatgagtaatcaacagctggaggacctc
attaatcaaggaagagaaaaagttgtggaagcaacaaacagtgtgacagcagtgaggatt
cagcctcttgaagatataatttcagctgtatggaaggaaaacatgaacctctcagaggcc
caggtacaggcattagcattaagtagacaagccagccaggagcttgatgtcaaacgaaga
gaggcaatctacaatgacgtgttgacaaaacaacagatgttaatcagctgtgttcagcga
atacttatgaaccgaaggctccagcaacagtacaatcagcagcagcagcagcaaatgact
tatcaacaagcaacactgggtcacctcatgatgccaaagcctccaaatttaatcatgaat
ccttctaactaccagcagattgatatgagaggaatgtatcagtccgtggctggtggtatg
cagccaccaccattacaacgtgcgccacccccaatgagaagcaaaaatccaggaccctcc
ccagggaaatcaatgtga
DBGET
integrated database retrieval system
