Cervus canadensis (wapiti): 122435773
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Entry
122435773 CDS
T07554
Name
(RefSeq) long-wave-sensitive opsin 1
KO
K04251
long/medium wavelength-sensitive opsin
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ccad04030
]
122435773
G protein-coupled receptors [BR:
ccad04030
]
Rhodopsin family
Vision
Opsin
122435773
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Srt
Srg
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
122435773
NCBI-ProteinID:
XP_043315795
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All DBs
Position
X:142896668..142911218
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AA seq
364 aa
AA seq
DB search
MAHEWGPQRLAGGQPQANFEESTQGSIFTYTNSNSTRDPFEGPNYHIAPRWVYHLTSAWM
VFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAIADLVETIIASTISVVNQMYGYFV
LGHPLCVVEGYTVSLCGITGLWSLAIISWERWMVVCKPFGNVRFDAKLAIAGIAFSWIWA
AVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLVITCCFIPLSVIVLCYL
QVWLAIRTVAKQQKESESTQKAEKEVTRMVMVMILAFCLCWGPYTFFACFAAAHPGYAFH
PLVAALPAYFAKSATIYNPIIYVFMNRQFRNCILQLFGKKVDDSSELSSVSKTEASSVSS
VSPA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgagtggggcccccaaaggcttgcaggtgggcagccacaggccaactttgag
gagagcacccaggggagcatcttcacctacaccaacagcaactccaccagagatcccttc
gaaggccccaattaccacattgctcccagatgggtgtaccacctcaccagcgcctggatg
gtcttcgtggtcatcgcgtccgtcttcactaatgggctcgtactggcagccaccatgaag
ttcaagaagctccgccaccctctcaactggatcctggtcaacttggccatcgctgacctg
gtggagaccatcatcgccagcaccatcagcgtcgtgaaccagatgtacggctactttgtg
ctgggccaccccctttgtgtcgtggagggctacactgtctccttgtgtgggatcaccggt
ctctggtccttggccatcatctcctgggagaggtggatggtggtctgcaagccctttggc
aacgtcagatttgatgccaagttggccatcgcgggcatcgccttctcctggatctgggct
gctgtgtggacggctccacccatctttggttggagtaggtactggccccatggcctgaag
acttcctgtggccccgatgtgttcagtggcagctcctacccgggggtgcagtcgtacatg
attgttctcgtgatcacgtgttgcttcatcccgctcagcgtcatcgtgctctgctacctg
caagtgtggctggctatccgaacggtggcgaagcagcagaaagaatctgagtccacccag
aaggcggagaaggaagtaacccgcatggtgatggtgatgatcttagccttctgtctctgc
tgggggccctacaccttctttgcctgcttcgccgctgcacaccccggctacgccttccac
cctctggtggccgccctgccagcctactttgccaaaagtgccactatctacaaccccatt
atctatgtcttcatgaaccgccagtttcgaaactgcatcttgcaactttttgggaagaag
gtggatgacagctctgaactctccagtgtttccaaaacagaggcgtcatccgtctcttca
gtgtcacctgcatga
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