Cervus canadensis (wapiti): 122436643
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Entry
122436643 CDS
T07554
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccad03016
]
122436643 (TRMT13)
Enzymes [BR:
ccad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
122436643 (TRMT13)
Transfer RNA biogenesis [BR:
ccad03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
122436643 (TRMT13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
122436643
NCBI-ProteinID:
XP_043316474
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All DBs
Position
2:complement(41324279..41342931)
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AA seq
481 aa
AA seq
DB search
MAASALTPHGTAFPEEGRCGYFVEKKKRFCRMVVAAGKRFCGEHAGASEEENARKRILCP
LDPKHTVYEDQLAKHLKKCNSREKPKPDFFIQDINAGLKDETEIPDQLVPISSLSEEQLE
NLIKKLRKASEGLNCTLKDQIMSHPALHDALNDPKNGDSAAKHLKQQASILGNIENLKLL
GPRRCFVEFGAGKGKLSHWVDIALKDAEKVHFILVEKVTTRFKVDGKHRKKNSVFERLQI
DIQHLCLNKIPLLSKEKLPVVGIGKHLCGVATDLALRCLVETYAASCEERNEEPLAKRIK
NDKTEKEINTLAKEGNEKNIPEKWTPVAGIVIALCCHHRCDWRHYVGKEYFRALGLGAVD
FHYFQRMSSWATCGMRKTSLEASNISTKRRDKQNDGSEEHDDGGYTITDDSPESLPGFLT
VEEKKKIGHLCKLLIDQGRIKYLQQKGFSPALQYYIDPLVSLENVLLTALPNHSSSPETS
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctctgcgctgacgccgcatggaactgcctttccagaagaggggcgatgcggt
tattttgtggaaaagaagaagcggttctgcaggatggtggtggcagccggaaaaaggttc
tgtggtgaacacgctggagcctcggaggaagaaaatgctcggaaaagaattctgtgtcct
ttagatccaaaacacacagtatatgaagatcaactagcaaagcatttgaaaaagtgtaac
tcaagagagaagccgaaacctgacttctttattcaagatattaatgcaggcttaaaagat
gaaactgaaataccagatcaattagttccaatttcgtctctctctgaagagcagctggaa
aacttaattaagaaattgagaaaagcaagtgaaggtttgaactgcacacttaaagatcag
attatgtcccatccagcgttgcatgatgcccttaatgaccctaaaaatggtgattctgca
gctaaacatctgaaacagcaggcttctattttaggtaacattgaaaatttaaagttactt
ggtccaagaagatgctttgttgaatttggagcaggaaagggaaaattatctcattgggtt
gatattgccttaaaagatgctgaaaaagttcacttcatcctagtagaaaaggtgaccaca
agattcaaggtagatggcaaacacagaaagaaaaactcagtgtttgaaagacttcaaatt
gatattcaacacttgtgtttgaacaagattcctttgctaagcaaagaaaaactacctgtg
gtaggaattggaaagcatctgtgtggtgtggcaacagatcttgcattacgatgtttggtt
gaaacctatgctgccagttgtgaggaaaggaatgaagaacctttagccaaacgcataaag
aatgataaaacagaaaaagaaattaacactttggccaaggaaggaaatgaaaaaaatatc
ccagagaagtggacccctgtggctggcattgttattgcactctgttgtcaccacaggtgt
gattggagacattatgtgggcaaagaatatttcagggctctgggccttggagcagtggat
ttccactatttccagcgaatgagtagttgggcgacttgtgggatgcgaaaaacgtctttg
gaagcttcaaatatttccacaaaaagaagagataaacagaatgatggcagtgaagagcat
gatgatggaggatacacaatcactgatgacagccctgagagtttgcctgggtttcttact
gttgaagaaaagaagaaaatagggcatctttgtaaattgctgattgaccaaggccgaatc
aagtatttacagcagaaaggcttcagtcctgctttacagtactatatagaccctctggtg
tctttggaaaatgtattgttaactgctttaccaaatcattcttcatcaccagaaacaagt
gcttaa
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