Cervus canadensis (wapiti): 122436652
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Entry
122436652 CDS
T07554
Symbol
NUP85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03013
Nucleocytoplasmic transport
ccad05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122436652 (NUP85)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122436652 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122436652 (NUP85)
03036 Chromosome and associated proteins [BR:
ccad03036
]
122436652 (NUP85)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122436652 (NUP85)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122436652 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_4
Motif
Other DBs
NCBI-GeneID:
122436652
NCBI-ProteinID:
XP_043316502
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All DBs
Position
1:6774627..6801306
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AA seq
656 aa
AA seq
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MEEFDGEPTVTWIPGVNSQKKQMCFDWGPGEMLVCETSFNIKEKPEMVAGCPFIHIIRKD
IDVYSKILRKLFNESHGIFVGLQRIEEELTGKSRKAQLVRVSKNYRSVIRACMEEMHQFA
VADKDSASGRQFSSQVSILSAMELIWNLCEILFIEVAPAGPLLLYLLDWVRLHVCEVDNL
SADVLGSENPSKHESFWNLVTTLVLQGRLDEARQMLSKEADANPASAGMCRVLGDLMRTM
PVLSPGNTQTLTELELRWQHWHEECERHLQDGTFASSPHLESLCKVLLGDDAALLEQKEL
LSNWYHFLVTRLLYSQPTVKPMDLHLYAQSSLDLFLGGESSPEPLDNILMAAFEFDIHQV
IKECSIALSNWWFVAHLTDLLDHCKLLQSHNLYFGSNMREFLLLEYASGLFAHHSLWQLG
VDYCDHCPELGRVSLELHIERIPLTTEQKALKVLRVCEQRQMTEQVRSICKILAMKAVRN
NRLGSALSWSIRAKDAAFATLVSDRFLRDYCERGCFSDLDLIDNLGPAMMLSDRLTFLGK
YREFHRLYGEKRFVDAASLLLSLMTSQIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYEL
LRCLEDLTSGRPLCGEPDAQQLQDDDIETTKVEMLRLALARNLARSIIKEGSLEGS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttcgatggcgagccgacggtcacttggattccaggagtgaattcccagaag
aagcaaatgtgttttgattggggtccgggggagatgctggtgtgtgaaacctctttcaat
ataaaagaaaaaccagagatggtggcaggttgcccctttatccatatcatccgaaaggat
atagatgtttactctaaaatcctgagaaaactcttcaatgaatcccatggaatcttcgtg
ggcctccagagaatcgaagaagagttgactgggaaatctagaaaagctcaattggttcga
gtgagtaaaaactaccgatcagtcataagagcgtgcatggaggaaatgcaccaatttgca
gttgctgataaagattcagccagtggccgccagttcagcagccaggtctccattctgtcg
gcaatggagctcatttggaacctttgtgagattctttttatcgaagtagccccagctggc
ccgctcctcctctacctccttgactgggtccggctgcacgtgtgcgaggtggacaatttg
tcagcagatgttctgggcagcgagaatccaagcaaacacgagagcttctggaacttggtg
accaccttggtgctgcagggccggctggacgaggcccgccagatgctctccaaggaagcc
gacgccaaccccgcctctgcaggcatgtgccgagtcctgggggacctgatgaggaccatg
cccgttctcagccctgggaacacgcagaccctgacggagctggagctgaggtggcagcac
tggcacgaggaatgcgagaggcacctccaggacggcacgttcgcctccagcccccacctc
gagtccctctgcaaggtcctgctgggagacgatgccgccctgctggagcagaaggagctt
ttgagtaactggtatcacttcctggtgacccggctgttgtactctcagcccacggttaag
cctatggatctgcacctctacgcccagtctagtcttgacctgtttctgggaggtgagagc
agcccagagcccctggacaacatcttgatggcagccttcgagtttgacatccaccaagtg
atcaaggagtgcagcatcgccctgagcaactggtggttcgtggcccacctgacggacctg
ctggatcactgcaagctgctgcagtcacacaacctctactttggatccaacatgagagag
ttcctcctgctggaatacgcctcaggactcttcgctcatcacagcctgtggcagctgggt
gtggactactgtgaccactgccctgagctgggccgggtctctctcgagctgcatattgag
cggatccctttgaccacggagcagaaagccctcaaggtactgcgggtctgcgagcagcgg
cagatgacggagcaagttcgcagcatctgtaagatcttggccatgaaagcggtccgcaac
aatcgcctgggctctgctctttcttggagcattcgcgccaaagatgccgcctttgccacg
ctggtgtcagacaggttcctcagggattactgtgagcgaggctgcttctctgacctggat
ctcattgacaacctggggccagccatgatgctcagtgatcgactgacattcctgggaaag
taccgcgagttccaccgcttatacggggagaagcgttttgtcgatgccgcctctctcctc
ctctctttgatgacatcccagattgccccccggtctttctggatgacgctgctcacagac
gccctgccccttttggaacagaaacaggtgatcttctccgcggagcagacgtacgagctc
ctgaggtgtctggaggacctgacctcaggaaggccgctgtgtggagagcccgacgcccag
cagctccaggatgatgatatcgagaccaccaaggtagaaatgctgagacttgctcttgca
cggaatcttgcccggtcgattataaaagaaggctcattggaaggttcctga
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