Cervus canadensis (wapiti): 122436974
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Entry
122436974 CDS
T07554
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122436974 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccad03041
]
122436974 (PRPF38A)
Spliceosome [BR:
ccad03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
122436974 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
122436974 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
122436974
NCBI-ProteinID:
XP_043317259
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All DBs
Position
2:complement(89092910..89114246)
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AA seq
312 aa
AA seq
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MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacggtaaaagatgcgcacagcatccacggcaccaaccctcagtatctg
gtggagaaaatcattcggacgcgaatttatgagtccaaatactggaaagaggagtgcttt
ggacttacagctgaacttgtagttgataaagccatggagttaagatttgtgggtggtgtc
tacggtggcaacataaagcccactccttttttgtgtttaaccttgaagatgcttcagatt
caacctgagaaggatatcattgtagagtttataaaaaatgaagatttcaagtatgtccgc
atgctgggagcactttacatgaggttgacaggtactgcaattgattgctacaagtacttg
gagcctctatacaatgactatcgaaaaatcaagagccagaaccgaaatggagagtttgag
ctgatgcatgtagatgaatttattgatgaactactgcacagtgagagagtctgtgatatc
attctgccccggctacagaaacgctacgtgctagaggaagccgagcagctggagccgcgg
gttagcgctctggaggaagacatggacgacgtggagtccagtgaagaggaggaggaggag
gatgagaagttggaaagagtgccatcacctgatcatcgccggagaagctaccgagacttg
gacaaaccccgtcgctctcccacactacgctatcggaggagtaggagtcggtctcccaga
aggcggagtcggtctcccaaaaggaggagcccctcccctcgccgagaacggcatcggagc
aagagcccaagacgtcatcgcagcaggtcccgagacagacggcacagatcccgctccaag
tccccaggtcatcaccgcagtcacagacacaggagccactcaaaatctcctgaaaggtct
aagaaaagccacaagaagagccggagagggaatgagtaa
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