Cervus canadensis (wapiti): 122437247
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Entry
122437247 CDS
T07554
Symbol
SFPQ
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccad01009
]
122437247 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccad03021
]
122437247 (SFPQ)
03041 Spliceosome [BR:
ccad03041
]
122437247 (SFPQ)
Protein phosphatases and associated proteins [BR:
ccad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122437247 (SFPQ)
Transcription machinery [BR:
ccad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122437247 (SFPQ)
Spliceosome [BR:
ccad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122437247 (SFPQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
122437247
NCBI-ProteinID:
XP_043317889
LinkDB
All DBs
Position
2:105040681..105056560
Genome browser
AA seq
707 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPVPGQGGPKPQI
PPPPPHQQQQQPPPQQPPPQQPPPLQPPPHQPPHQQPPHQQPPPPPQDSSKSVVPQGPGS
APGVGSAPPATGSAPPATPPTSGAPTGPGPTPTPPPAVTSAPPGAPPPAPPSSGVPSTPP
QAGGPPPPPPAGGPVPGPKQGPGPGGPKGGKMPGGPKPGGGPGLTTPGGHPKPPHRGGGE
PRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKANLSLLRRPGEKTYTQRCRLF
VGNLPADITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGR
QLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFAS
KPAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRF
AQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLM
RRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYSRM
GYMDPRERDMRMGGGGAMNMGDPYGSGGQKFPPLGGGGGIGYEANPGVPPATMSGSMMGS
DMRTERFGQGGAGPVGGQGPRGMGPGTPAGYGRGREEYEGPNKKPRF
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggaccggttccgaagccggggcggtggcggtggtggcttccaccgacgcgga
ggaggaggcggccgcggcggcctccacgacttccgctccccgccgcccggcatgggcctc
aatcagaatcgcggacccatggggcccgtgccgggccaaggtggccccaagcctcagatc
ccgccaccgcctccgcaccagcaacagcagcagccaccgcctcagcagccgccaccgcag
cagccgccgccgcttcagcccccgccgcaccagccgccccatcagcagccgccgcaccag
cagccgccgccgccgccacaggactcatctaagtctgtcgttcctcaaggacccggttcg
gctcccggagtaggcagcgcccctccggccaccggctcggcgccgcccgccacacccccg
acctcgggggcccccacggggccaggccccaccccgaccccgccgcccgctgtcacctcg
gcgcccccaggtgcgcctccaccggctccgccgagcagtggggtgcccagcaccccccct
caggctgggggcccgccgcctccaccacctgcagggggcccggtgcccgggcctaagcag
ggcccgggacccggcggccccaagggcggcaaaatgccaggcgggccgaagcctggcggc
ggcccgggcctaactactcctggcggccaccctaagccaccgcaccgaggtggcggggag
ccccgcgggggccggcaacaccatccgccctaccaccagcagcaccaccaagggccgccg
cccggagggcccggcggccgcagcgaggagaagatttcggactctgaggggtttaaagcc
aacttgtcactcctgaggaggcctggagagaaaacttacacccagcgttgtcggttgttt
gttggtaatctacctgcagacatcacggaggatgaattcaaaagactttttgctaaatat
ggagaacctggagaagtttttataaacaaaggcaaaggatttggatttattaagcttgaa
tctagagcgttggccgaaatagctaaagctgaacttgatgatacacccatgagaggtaga
cagcttcgggttcgatttgccacacatgctgctgccctttctgttcgaaatctttcacct
tatgtttccaatgaactgttggaagaagcctttagccagtttggtcctattgaaagggct
gttgtaatagtggatgatcgtggaagatctacagggaaaggcattgttgaatttgcttcc
aaaccagcagcaagaaaagcatttgaaagatgcagtgaaggtgttttcttactgacaaca
actcctcgtccagtcattgtggaaccacttgaacagttagatgatgaagacggtcttcct
gaaaaacttgcccagaagaatccaatgtatcaaaaggagagagaaacccctcctcgtttt
gcccagcatgggacatttgagtatgagtattctcagcggtggaagtcccttgatgaaatg
gaaaaacagcagcgggaacaagttgaaaaaaacatgaaagatgcaaaagacaaattggaa
agtgaaatggaagatgcctatcatgagcatcaggcaaatcttttgcgtcaagatctaatg
agacgccaggaagaattaagacgcatggaagaactgcacaatcaagaaatgcagaaacgt
aaagagatgcaattgaggcaagaggaagaacgacgtaggagggaagaagagatgatgatt
cgtcaacgtgagatggaagaacagatgagacgccaaagagaggaaagttatagtcggatg
ggctatatggatccaagagaaagagacatgagaatgggtggtggaggagcaatgaacatg
ggagatccctatggctcaggaggccagaaatttccacctctaggtggtggtggtggcata
ggttatgaagctaatcctggagtcccaccggcaacaatgagtggttccatgatgggaagc
gacatgcgtactgagcgctttgggcagggaggtgcgggacctgtgggtggacagggtcct
agaggaatggggcctggaactccagcaggatatggtagagggagagaagagtatgaaggc
ccaaacaaaaaaccccgattttag
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