KEGG   Cervus canadensis (wapiti): 122437761
Entry
122437761         CDS       T07554                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad03013  Nucleocytoplasmic transport
ccad03015  mRNA surveillance pathway
ccad03040  Spliceosome
ccad05014  Amyotrophic lateral sclerosis
ccad05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122437761
  09122 Translation
   03013 Nucleocytoplasmic transport
    122437761
   03015 mRNA surveillance pathway
    122437761
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    122437761
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    122437761
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccad03019]
    122437761
   03041 Spliceosome [BR:ccad03041]
    122437761
Messenger RNA biogenesis [BR:ccad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     122437761
    TREX complex
     122437761
Spliceosome [BR:ccad03041]
 Complex C
  Other components
   EJC/TREX
    122437761
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    122437761
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded
Other DBs
NCBI-GeneID: 122437761
NCBI-ProteinID: XP_043318239
LinkDB
Position
3:complement(31033055..31034218)
AA seq 256 aa
MADKMDMSLDDIIKLNWSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGTRRGTRGGSRGRGRGTGRSSKQQLSAE
ELDAQLDAYNARMDTS
NT seq 771 nt   +upstreamnt  +downstreamnt
atggccgacaaaatggatatgtctctggacgacatcattaagctgaactggagccagcga
ggcggccgcggcgggggcaggggccgcggccgggccggctcccagggtggccgcggcggc
ggggcccaggccgccgcgcgagtgaaccgaggcggcggacccattcggaatcggccggct
atcgcccgcggcgcggcgggcggcggcggcaggaaccggccggcgccctacagcaggccg
aaacaacttcctgacaaatggcagcatgaccttttcgatagcggttttgggggtggtgcc
ggcgtggagaccggtgggaaactgctggtgtcaaatctggattttggagtgtccgacgct
gatattcaggagctctttgctgaatttggaactctgaagaaggcggctgtgcactacgac
cgatctggccgcagtttaggaacagctgacgtgcactttgagcggaaggcagatgcacta
aaagctatgaaacagtacaacggcgtccctttggatggccgccccatgaacattcagctc
gtcacctcacagattgacacgcagcggagacctgcacagagtgtaaacagaggtgggatg
actagaaaccgtggttcaggaggtttcggtggcggcggcacccggagaggcacccgtgga
ggcagccggggcagaggcagaggcaccggcaggagttcaaagcagcagctttccgcagaa
gaattagatgcccagctggatgcttataatgcaagaatggacaccagttaa

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