Cervus canadensis (wapiti): 122438091
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Entry
122438091 CDS
T07554
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122438091 (VPS50)
Membrane trafficking [BR:
ccad04131
]
Protein recycling
Others
EARP complex
122438091 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
122438091
NCBI-ProteinID:
XP_043318529
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All DBs
Position
3:9566070..9686673
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AA seq
964 aa
AA seq
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MQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSASEG
SNMMGAEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQSSATSSKTVTLFEQYCSGGNPFEIQADHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDFVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLDVSADPTATLTAAEERKEKVPSPHLSHLVVLTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDTLLKEFEQFNMRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLSAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaataaaatctcttatgacccggcagggtctgaaaagtcctccagagagcctc
agtgatcttggtgccattgagagtctccgggtccctggaaaggaggaattccgagaactt
cgagaacaacctagtgaccctcaagctgaacaagaactaattaatagtattgaacaagtg
tatttttctacagattcatttgatattgttaaatatgaactagagaagctccctcctgtt
ctcaatttgcaagaattagaggagtacagagacaaattgaaacaacagcaggctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtcaaggaacttgag
agagttacctcattacaaacaggtcttcagttagctgctgttatctgcaccaatgggagg
agacacttgaatattgcaaaggaaggttttactcaagctagtttaggcctccttgcaaat
cagaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtccgcttaagtgaaatgctggaggaggaagactatccaggagctatt
cagctgtgcctggagtgtcagaaagctgccagcacttttaaacattacagttgcataagt
gaactgaattcaaagttgcaagatactttagaacaaatcgaggaacagttggatgttgct
ctgtccaaaatctgcaagaattttgatattaaccactacaccaaagttcaacaagcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcatatgcacttcacccaagcc
attcataacaccgtgtttcaagttgttcttggctatgtggagctatgtgcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacgcatgttacaccagacagc
tatatcccatgccttgctgacctgtgcaaagcactgtgggaagtcatgctcagctattac
aggactatggaatggcatgaaaagcatgacaatgaggatactacttctgcttctgaaggg
agtaatatgatgggtgctgaagaaacaaattttgatcgtggctacataaaaaagaaatta
gaacatggacttacacgaatatggcaggatgttcagctaaaagttaaaacctacttgctt
ggaactgatttgtctatattcaaatatgatgatttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaagaatct
attagaaaacaaagtgtcaattattttaagaactaccatagaacaaggcttgatgaactg
agaatgtttctagagaatgagacctgggaactttgtcctgtgaagtcaaatttcagcatc
ttgcaacttcatgaatttaagttcatggaacagtctcgttccccatccgtttcccccagt
aagcagtcatctgcaacttcctcaaaaacagtaaccttgtttgagcagtactgcagtggt
gggaacccatttgaaattcaggccgaccacaaagatgaagaaacggaagatgtcctggct
tctaatgggtatgaatctgatgaacaagaaaaaagtgcttatcaggaatatgacagtgac
agtgatgttcctgaggaactaaaacgagattttgttgatgagcagacaggagatgctcct
gtgaaaagtgtttctcgagagaccctaaaaagcaggaagaaatcagattacagtctaaat
aaagtgaatgcacccatcttaacaaatacaacattaaatgtaataaggcttgttggtaaa
tatatgcagatgatgaacattcttaagccaattgcttttgatgttatccatttcatgtct
cagctctttgattattacttgtatgcaatatataccttttttggtcggaatgattcgttg
gaatcaacaggactaggtcttagcagtagtagactaagaacaactctaaacaggatacaa
gaaagcctcattgatctggacgtttcagctgaccccactgccacgctcacagcagcagaa
gagagaaaggagaaggtaccaagtcctcacctcagtcacctagtggttctgacatctggg
gacacgttgtatgggttggcagaaagagtggtcgccacagaatccttggtattcttggct
gaacagtttgagttccttcagcctcatctggatgctgtgatgcctgcagtcaaaaagccc
tttcttcagcagttttattctcagacagtctcaacggccagtgaactacgcaaaccaatt
tactggattgtagctggtaaagccattgattatgaacagatgctgctcctaatggctaat
gtgaaatgggatgtaaaagaaattatgtcacagcacaacatatatgtagatacactgcta
aaggaatttgagcagtttaacatgcggttaaatgaagtttctaagagagttcggataccc
ttgcctgtgtctaatatactttgggaacattgtatacgcctggctaatagaactattgtg
gaaggatacgccaacgtcaagaagtgtagtaatgagggtcgtgccttgatgcaattggat
tttcaacagtttttaatgaaacttgaaaagctaactgatattagacccattccggataaa
gaatttgtggaaacctatattaaagcgtactacctaactgagaatgacatggaacgctgg
atcaaagagcacagggagtattcaacaaagcagctgaccaacctggtaaatgtttgcctg
ggatcccacatcaataagaaagcaagacaaaaacttctctcagctatagatgatatagac
agacccaaaagataa
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