Cervus canadensis (wapiti): 122438416
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Entry
122438416 CDS
T07554
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122438416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122438416
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122438416
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122438416
NCBI-ProteinID:
XP_043319196
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All DBs
Position
3:60698696..60699767
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AA seq
235 aa
AA seq
DB search
MEGAMQTESKIRADSGTEHGPRGPGCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYG
PAEVKVSKEIFNKATLEVILRPKTGLPGVAEKSRERLIRNTCEAVVLGALHPRTSITVVL
QVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSDGTLMLDPTAKQEKEARAV
LTFALDSVERKLLMSTTKGLYSDAELQQCLAAAQTASTHVFRFYRESLQRRYSKS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggagggggcaatgcagactgaatcgaagatccgggctgattctgggacagagcacggc
cctcggggccccggctgtagcctccggcactttgcctgcgaacagaacttgttatcccgg
cctgatggctctgcctcttttctgcaaggggatacctccgtcctggccggcgtgtacggg
ccagccgaggtgaaggttagcaaagagatcttcaacaaggccacgctggaagtgatcctg
aggccgaagactggtctgcctggcgtagcggagaagagccgggagcggctgatcagaaac
acatgcgaagcggtggtactgggagcgctgcacccccgaacctccataactgtggtgctg
caggtcgttagcgatgctggctctctcctggcctgttgcctgaatgctgcctgcatggcc
ctggtggacgccggtgtgcccatgcgggccctcttctgtggggtcacttgtgctctggac
tctgatgggaccctcatgctagaccctactgctaaacaggaaaaggaggcgcgggcagtc
ctgacctttgctcttgacagcgtggaacggaagctgctgatgtccactaccaaggggctc
tactccgatgccgagctccagcagtgcctggctgcggcccaaactgcctccacacacgtc
ttccgcttctaccgggaatcgctgcagaggcgttactcgaagagctga
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