Cervus canadensis (wapiti): 122438527
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Entry
122438527 CDS
T07554
Symbol
DDX56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccad03009
]
122438527 (DDX56)
Enzymes [BR:
ccad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122438527 (DDX56)
Ribosome biogenesis [BR:
ccad03009
]
Eukaryotic type
Pre-60S particles
Helicases
122438527 (DDX56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
122438527
NCBI-ProteinID:
XP_043319401
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All DBs
Position
3:72616125..72625558
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AA seq
546 aa
AA seq
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MEDQESLGFEHMGLDHRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA
YAIPMLQLLLHRKATGPAVEQAVRALVLVPTKELARQAQSMIQQLAAYCARDIRVANVSA
AEDSASQRAVLMEKPDVVVGTPSRILNHLQQDNLKLRDSMELLVVDEADLLFSFGFEEEL
KSLLCHLPRIYQAFLMSATFNEDVHALKELVLHNPVTLKLQESQLPGPDQLQQFQVVCET
EEDKFLLLYALLKLSLIRGKSLLFVNTLERSYRLRLFLEQFSIPACVLNGELPLRSRCHI
ISQFNQGFYDCVIATDAEVLGPPVKGKHRGKGPKRDKASDPEAGVARGIDFHHVCAVLNF
DLPPTPEAYIHRAGRTARANNPGIVLTFVLPTEQSQLGKIEELLSGDSGAPVLFPYQFHM
EEIEGFRYRCRDAMRSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPL
HPAVVKPHLGNVPDYLVPPALRGLVHPHKKRKKPPASKKAKKAKTQNPLRSFKHRGEKRR
PTAAPS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcaagaatcgttgggcttcgaacacatgggcctggaccaccggctcctacag
gccgtcaccgatctgggctggtcgcgacccacgttgatccaggaaaaggccatcccgctg
gcgctggaagggaaggacctcctggctcgcgcccgcactggttccgggaagaccgccgct
tatgccattccgatgctacagctgttgctccacaggaaggcgacagggcctgcagtagag
caggctgtgagagcccttgtccttgtgccgactaaggaattggcaaggcaggcccaatcc
atgattcagcagctggctgcctactgtgctcgagacatccgggtggccaacgtgtcagcc
gctgaagactcagcctctcagagagctgtactgatggagaagcccgatgtggtggtgggg
accccatcccgcatattaaaccacttgcagcaagacaacttgaagcttcgagactccatg
gagctgctggtggtcgatgaggctgatcttcttttttcctttggctttgaggaggaactt
aagagtcttctctgtcacttgccccggatttaccaggcttttctgatgtcagctactttt
aatgaggatgtgcacgccctcaaggagctggtactacataacccggttaccctcaagtta
caggagtcccagctaccagggccagaccagttgcagcagtttcaggtggtctgtgagact
gaggaagacaaatttctgttgctatatgccctgctcaagctgtcgttgattcggggaaag
tctctgctctttgtcaacactctggagcggagttaccggctgcgcctattcctggagcaa
ttcagcatccccgcctgtgtgctcaatggagagcttccactacgctccaggtgccacatc
atctcgcagttcaaccagggcttctacgactgcgtcatagcaacagatgctgaagtcctg
gggcctccagtcaagggcaagcatcggggcaaaggacccaagcgggacaaggcttctgat
ccagaggcaggcgtggccaggggcatagacttccaccacgtatgtgccgtgctcaacttt
gatctcccccctacccccgaggcctacatacatagggccggcaggacggcacgtgccaac
aaccccggcatagttttgaccttcgtgctgcccacagagcagtctcagctgggcaagatc
gaggagcttctcagtggagacagtggggcccctgtcctgtttccttaccagttccacatg
gaggagatcgagggcttccgctaccgctgcagggatgccatgcgctcagtgactaaacaa
gccatccgcgaggcaaggctgaaggaaatcaaagaggagctcctgcactcagagaagctc
aagacatactttgaagacaaccccagggacctccagttgctgcggcacgacctgccctta
caccccgccgtggtgaagcctcacctgggcaacgtccctgactacctggttcctcctgct
ctgcgcggcctggtccacccacacaagaagcggaagaagccccctgcctctaagaaggcc
aagaaggcaaagacacagaacccactgcgaagcttcaagcacagaggagagaaacgcaga
cccacagcagcaccctcctga
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