Cervus canadensis (wapiti): 122438573
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Entry
122438573 CDS
T07554
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03018
RNA degradation
ccad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122438573 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
122438573 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122438573 (LSM8)
03041 Spliceosome [BR:
ccad03041
]
122438573 (LSM8)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122438573 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
122438573 (LSM8)
Spliceosome [BR:
ccad03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
122438573 (LSM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
122438573
NCBI-ProteinID:
XP_043319492
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All DBs
Position
3:78443768..78452240
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AA seq
96 aa
AA seq
DB search
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgccttggagaactacatcaaccgaactgttgctgttattacttctgatggg
agaatgattgtgggaacactgaaaggttttgaccagaccattaatttgatactggatgaa
agccatgaacgagtgttcagctcttcacagggagtagaacaagtggtactagggttatac
atcgtaagaggtgacaatgttgcagtcatcggagaaattgatgaagagacagattctgca
cttgatttggggaatattcgagcagaacctttgaactctgtagcacactga
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