Cervus canadensis (wapiti): 122438805
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Entry
122438805 CDS
T07554
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein isoform X1
KO
K11988
sonic hedgehog
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04340
Hedgehog signaling pathway
ccad04360
Axon guidance
ccad05200
Pathways in cancer
ccad05205
Proteoglycans in cancer
ccad05217
Basal cell carcinoma
ccad05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122438805 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
122438805 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122438805 (SHH)
05205 Proteoglycans in cancer
122438805 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
122438805 (SHH)
05217 Basal cell carcinoma
122438805 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccad01002
]
122438805 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccad00536
]
122438805 (SHH)
Peptidases and inhibitors [BR:
ccad01002
]
Cysteine peptidases
Family C46: hedgehog family
122438805 (SHH)
Glycosaminoglycan binding proteins [BR:
ccad00536
]
Heparan sulfate / Heparin
Morphogens
122438805 (SHH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
VldE
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
122438805
NCBI-ProteinID:
XP_043319909
LinkDB
All DBs
Position
3:complement(109107287..109119524)
Genome browser
AA seq
456 aa
AA seq
DB search
MDEMLLLARCLLVLLVSSLLMCSGLACGPGRGFGKRRNPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLAADDEGRLLYSD
FLTFLDRDRGAKKVFYAIETREPRERLLLTAAHLLFVAPHNGSAAGAPEGAAAAAGGGAP
GRRALFASRVRPGQHVYVVAERGGARRLLPAAVHSVTLREETAGAYAPLTAHGTILINRV
LASCYAVIEEHSWAHGAFAPYRLAHALLAALAPGRTDRGGAGDGGGGGRVPPPVPGAADA
PGAAGIHWYSELLYQIGTWLLDSEALHPLGMAVKSS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggacgagatgctgctgctggcgagatgtctcctggtgctgctggtctcctcgctgttg
atgtgctcggggctggcgtgcggacccggcaggggatttggcaagaggcggaaccccaaa
aagctgacccctttagcctacaagcagtttatccccaacgtggccgagaagaccctaggg
gccagtggaagatacgaggggaagatcaccagaaactcagagcgatttaaggaactcacc
cccaattacaaccccgacatcatatttaaggatgaggaaaacactggagcggaccggctg
atgactcagaggtgcaaggacaagctgaacgccttagccatctccgtgatgaaccaatgg
ccgggcgtgaagctgcgggtgactgagggctgggatgaggacggccaccactcggaggag
tcgctgcactacgagggccgcgccgtggacatcaccacctcggaccgcgaccgcagcaag
tacggcatgctggcgcgcctggccgtggaggccggcttcgactgggtctactacgagtcc
aaggcgcacatccactgctccgtgaaagcagagaactcggtggcggccaagtcgggcggc
tgcttcccgggctcggccacggtgcatctggagcagggcggcaccaagctggtgaaggac
ctgcggcccggggaccgcgtgctggcggccgacgacgagggccggctgctctacagcgac
ttcctcaccttcctggaccgcgaccgtggcgccaagaaggtcttctacgccatcgagacg
cgggagcctcgcgagcgcctgctgctcaccgccgcgcacctgctctttgtggcgccgcac
aatggctcggccgcaggggcgcccgagggggcggcggcagcggcgggcgggggcgcgcca
gggcgccgggcgcttttcgccagccgcgtgcggccgggccagcacgtgtacgtggtggcc
gagcgcggcggggcccggcggctgctgcccgccgcggtgcacagcgtgacgctgcgcgag
gagacggcgggcgcctacgcaccgctcacggcacacgggaccatcctcatcaaccgggtg
ctggcctcgtgctacgcggtcatcgaggagcacagctgggcgcacggggccttcgcgccc
taccgcctggcgcacgcgctcctggccgcgctggcgcccgggcgcacggaccgcggcgga
gccggcgacggcgggggcggcggccgagtccccccgcccgtgccgggggcggccgacgcg
ccgggcgccgcgggcatccactggtactcggagctgctctaccaaataggcacctggctg
ttggacagcgaggccttgcacccgctgggtatggcggtcaagtccagctga
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