Cervus canadensis (wapiti): 122439187
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Entry
122439187 CDS
T07554
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122439187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122439187
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122439187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122439187
NCBI-ProteinID:
XP_043320212
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All DBs
Position
4:complement(41159255..41160194)
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AA seq
275 aa
AA seq
DB search
MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNXSIGTADGSSLVKLGNTTVICG
IKAEFAAPPTDAPDKGYVVPNVDLSPLCSWRFRSGPPGEEAQVASQFIADVIENSQIIQK
EDLCISPGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEETALAEVNL
KKKSYLNIRTHPVATSFAVFDDTLLIVDPTEEEEHLATGTLTVVMDEEGRLCSLHKPGGS
GLTGSKLQDCMSRAVTRHKEVKKLMDEVLKSMKPK
NT seq
827 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgggttcaaaactgtggaacctctggagtattacaggagatttctgaaagag
aattgccgtcctgatggaagagaacttggtgaattcagaaccacaactgtcaacgttcga
ttggtaccgcagatggttcttctttagtgaagctgggaaatactacagtaatttgtggaa
ttaaagcggaatttgcagcaccaccaacagatgcccctgataaaggatatgttgttccta
atgtggatctgtcacctctgtgttcctggagatttcggtctggccctcctggagaagagg
cccaagtggccagccagttcattgcagatgtcattgaaaattcacagataattcagaaag
aagacttatgcatctctccaggaaagcttgcttgggttttgtactgtgatctcatttgcc
tcaaccatgatggaaacattttggatgcttgtacctttgctttgttagcagctttaaaaa
atgtacagttgcctgaagttactataaatgaagaaactgctttagcagaagttaatttaa
agaagaaaagttatttgaatattagaactcatccagttgcaacttcctttgctgtgtttg
atgacactctgcttatagttgatcctacggaagaggaggaacatctggcaactggaacct
taacagttgtaatggacgaagaaggcaggctctgtagtcttcacaaaccaggtggaagtg
gactgactggatctaaacttcaagactgtatgagccgagcggttacaagacacaaagaag
taaaaaaactgatggatgaagtacttaagagtatgaaacccaaatga
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