Cervus canadensis (wapiti): 122439519
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Entry
122439519 CDS
T07554
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122439519 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122439519 (TTC37)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
122439519 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_8
TPR_16
TPR_17
TPR_14
TPR_12
TPR_CcmH_CycH
TPR_11
ANAPC3
TPR_9
Sel1
ARM_TT21_C
Fis1_TPR_C
ARM_TT21_2nd
ARM_TT21_5th
TPR_15
TPR_6
TPR_20
BTAD
TPR_30
TPR_5
DUF7017
Motif
Other DBs
NCBI-GeneID:
122439519
NCBI-ProteinID:
XP_043320548
LinkDB
All DBs
Position
4:15458129..15554246
Genome browser
AA seq
1563 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNHINAKDDLPGVYQKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHVEVARTWHKLIKTRQEEGADTQELHQLWRKLTQLLAGCTEDQNNETQQ
LLLTAFENALGLSDKIPSEDHQVLYKHFIQCLSKFPHETARLKKACEGMINVYPTVQYPL
EVLCLHLIESGSLTDEGEQYCCRLVEMDPQSGAGLIGLGIKALQDKKYEDAVRYLTEGIK
ESPLCTAGWYHLAEAQVRMHKPKEAVLSCNQALKNIDNLGVSGGRLHQKNLCLRLKAEAL
IKLSDYESSEEAIRTLDQVSDANNIPGLLVLKGLAYLNKGSLDEASKIMEDLLSSYPDLT
EAHALEALIHFTKKDYLQAEKCFQRALEKDAEVAEYHYQLGLTYWSMGEETRKDKTKALT
HFLKAAKLDTYMGKVFCYLGHYYKDVVGDKNRARGCYRKAFELDDTDAESGAAAVDLSVE
LEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESIYSVFKVAAIQQTLGKYKEAVAQYQLIIN
KKEDYVPALKGLGECHLLLAKAALVDYLDGKAVDYIEKALEYFTRALQHRADVSCLWKLV
GDACTSLSAVSPSKVNVSVLGVLLGQKEGKQVLKKNELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQHLADTGSNSDDLQELLEKSMHCLKKAVRLDSNNHLYWNALGVVSCYSGI
GNYALAQHCFIKSIQSEQINAVAWTNLGVLYLANEKIEQAHEAFKMAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSSRDTELYRYHILQMN
AVPAAHVVLSKYVERIQNYAPAFTMLGYLNEHLQLKKEAANAYQRAILLLQTAEDRDAYN
VTVRNYGRLLCSIGEYDKAIQAFKSTPLEDLEDIIGFALALFMKGVYKESSKAYERALAI
VELEQDKAHILTALAIAEYKQGKMDVAKTLLFKCSILKEPTVESLQALCALGLAMQDATL
SKAALNELVKHSKQNSDYQRSLLTSAIYALQGRSVAVQRQASRAVHSNPADPALWSLLSR
VVAQYTQRNAKGGAVAGNVAHILDSNHGKKALLYTAVNQLAMGSNSAEDEKNTALKTIQK
AALLSPGDPAVWAAVMAACHADGTLALVSSTPPKRTGLCWALLSAVSASIKDKGFYENYN
QSLERWSLSQAVTGLIDTGRISEAEALCTKSLKSNPDQPAVILLLRQVQCKPLLESRKPL
PDAVLEELQKTVMSNSTSVPAWQWLAHVSQSQGMMGAAEMCYRKSLQVASQQGSWGGKLS
SLLRLALLALEVCMANVSSDHWPSLVQEATAEALKLCFCPLAVLLQALLQFKRKMGARET
RRLLERVVYQPGYPKSIVSTARWYLLRHLHAKNDYELIDVLVNNAKTHGDARALELNQKL
SSQ
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaggaagtaaagactgctctgaaaagtgctagagatgcgatcagaaacaaa
gaatacaaggaagctttgaaacattgtaagacggtgttaaaacaagagaagaataactat
aatgcctgggttttcattggcgttgctgcagccgagctagaacagcctgatcaggcccag
ggtgcctacaagaaagctgctgaattagagccagaccagctactagcttggcaggggtta
gcaagtttgtatgagaaatgtaatcacatcaatgctaaggatgacttacctggtgtttac
caaaagctcctggatctgtatgaaagtgttgacaaacagaagtggtgtgatgtctgtaag
aaactggtggatctgtattaccaagaaaagaaacacgtagaggtggcccggacatggcac
aaattgataaagacacgacaggaagaaggtgcagacacccaggagcttcatcagctgtgg
aggaagttgactcagttgctggctgggtgcactgaggatcagaataatgagacccagcaa
ttgcttttaactgcctttgagaatgcactgggcttatcagataagattcctagtgaagat
caccaagtgctttataaacatttcattcagtgtttatccaaatttcctcatgagactgct
aggttgaagaaagcctgtgaaggaatgataaacgtctatcccactgtgcagtatccatta
gaagtgctttgtttacatttaattgaatcaggaagtcttactgacgagggagaacagtat
tgttgtagactagtggaaatggatccccaaagtggtgcaggtctcataggtttaggcatt
aaagcattacaagacaaaaagtatgaagatgctgttaggtacttaacagaagggataaag
gaaagccccctctgcacagctggatggtatcatctggcagaagcccaagtcagaatgcat
aaacctaaggaagctgttctttcgtgcaatcaagctctgaagaatatagataaccttggt
gtgtctggtggcagactgcatcagaagaatctttgtcttcgtttgaaagcagaggctttg
attaaactctcagattatgaatcttcagaggaagcaattcgtactcttgatcaggtttct
gatgcaaataatatcccaggacttttggttctcaaaggcttggcctatctgaacaagggc
tcattagatgaagcttcaaagattatggaagaccttctctcttcttaccctgacctaact
gaagctcatgccctggaggctttgattcattttaccaaaaaggactatctacaagcagaa
aaatgttttcagcgagctcttgagaaagatgctgaagttgctgaatatcattaccaactt
gggttaacatattggtccatgggtgaagaaacaagaaaagataaaacaaaggctcttacc
cactttttgaaggctgccaaactggatacatacatgggcaaagttttctgctatttaggt
cattattacaaagatgtagtaggtgataaaaatagggcccgtggatgttataggaaagct
tttgaattagatgacaccgatgcggaatctggagctgcagcagttgacttaagtgttgag
cttgaagagatggaaactgccttagctatcctgacaacagtcactcaaaaggcaagtgct
gggacggcaaagtgggcctggcttaggcgaggcctatactatctgaaagctggtcagcat
tcccaagcggtggctgatttacaggcagcattaagggcagacccgaaggacttcaattgc
tgggagtcattaggagaggcatacctaagcagaggtggctatacaacagccttgaaatcc
ttcacaaaagccagtgagctgaacccagagtccatctacagtgtgtttaaggtggcagca
atacagcaaacccttggcaaatataaggaggcggtagctcagtaccagctgatcattaac
aagaaagaagattatgtgcctgctctgaaaggtttgggtgaatgccacctcctgttggca
aaagcagctctagtcgattatcttgatgggaaagctgtagactacatagagaaagcactg
gaatattttactcgggctctgcaacatcgagctgatgtgtcttgcctttggaagctagtt
ggggacgcttgtaccagtctttctgctgtctcaccatctaaagtgaatgtcagtgtctta
ggagtccttctaggtcagaaagaaggaaaacaagtattaaagaaaaatgagctcctccat
cttggaggaagatgttacggtcgtgcattaaaactgatgtctacatctaatacatggtgt
gaccttggaattaattattatcgccaagcacaacatctagcagacacaggcagcaactca
gatgaccttcaagagttgttggagaaatctatgcattgtctaaaaaaagctgtgagactt
gacagtaataatcacttatactggaatgcgcttggtgtagtttcatgttacagtggtatt
ggaaattatgcccttgctcagcactgtttcatcaaatcaatccagtcagaacaaattaat
gcagttgcatggaccaacttgggagtgttataccttgcaaatgaaaaaattgagcaagct
catgaagctttcaaaatggctcaatcccttgatccatcttatttaatgtgctggattgga
caagctctaattgcagagacagtgggaagttatgacaccatggatctcttcaggcacact
acagaactcagtatgcatactgagggagcaataggttatgcgtattgggtctgcacaaca
ctgcaagataagagcagcagagacacggagctctaccggtaccacatcctgcagatgaat
gccgtcccagcagcgcacgtggtcctgagcaaatacgtggagagaattcagaattatgct
ccagctttcacaatgttgggttacttaaatgaacatctgcaactgaagaaggaagcagca
aatgcgtaccaaagggcaattttgttgttacagactgcagaagaccgagatgcttataat
gttacagtaagaaattatggcagattgttatgttccattggtgaatatgataaagctatc
caggcttttaagtcaacaccccttgaggatttagaagacatcatcggtttcgcattagct
ttgtttatgaagggtgtgtacaaggagagcagcaaagcgtatgagagagccttggcaatt
gttgaattagagcaagacaaagctcatatcctgacagctctggcaatagcagaatataaa
caaggaaaaatggatgtagccaagacattgctgttcaaatgctctatcttaaaggaacca
acagtggaaagccttcaagccctgtgtgctctgggattggcaatgcaggatgctacactg
tcaaaagctgcacttaacgagctagtgaagcacagcaaacagaacagtgattatcagagg
agccttcttacttcagccatctatgccctgcaaggccgcagcgtggcagtgcagagacaa
gcatccagagctgttcatagtaacccagctgatcctgctctttggtccctgttgtcccga
gtggttgcccagtatactcagcgaaatgcaaagggaggtgcagtggcaggaaacgtggct
catattctggactcaaatcatggaaagaaggcattactgtacactgcagtaaatcagttg
gcaatgggaagcaattcagcagaagatgagaaaaatactgcactaaagaccattcagaag
gcagctctcctttctccaggtgaccctgctgtctgggctgcagtgatggcagcgtgtcac
gccgatggtacactggccctggtgagcagcactccgccaaagaggacgggtttatgctgg
gcactgttatctgctgtttctgcttcaattaaagacaaaggattctatgaaaattacaac
cagtctcttgaaaggtggtctctctctcaagctgtcactggtttaatagacacaggaaga
atatctgaagctgaagccctctgcacaaagagtttaaaaagtaaccctgatcaaccagct
gttatcttgctcttgagacaagttcaatgtaaaccactcctggagtcacgaaaacctctc
ccagatgctgtacttgaagagctgcaaaaaacagtcatgtccaactcaacctctgttcca
gcttggcagtggctggcacacgtatctcagtcccagggaatgatgggcgctgcagagatg
tgctacagaaagagtctgcaagtagcgtcccagcagggcagctggggcgggaagctctcg
agcctgttgcggctagcactgctcgcgctggaagtctgcatggctaatgtttccagtgat
cactggccatccttggttcaagaagctacagctgaggccctgaaactttgcttttgtcca
cttgctgtccttttacaagctttgttacaattcaaacgcaaaatgggagcaagagagaca
cggcgacttttggagagagttgtgtatcaacctgggtatcccaaatctattgtttcaaca
gcacgttggtaccttctgagacacttacatgccaaaaatgactacgagctcattgatgtg
ctggtaaacaatgccaaaactcacggagatgcaagagcgttggaactgaatcagaaattg
tcctcacaataa
DBGET
integrated database retrieval system
