Cervus canadensis (wapiti): 122439795
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Entry
122439795 CDS
T07554
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-12-like
KO
K16494
protocadherin beta
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccad04515
]
122439795
Cell adhesion molecules [BR:
ccad04515
]
Cadherins
Protocadherins
122439795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
122439795
NCBI-ProteinID:
XP_043321186
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All DBs
Position
4:complement(56471328..56474687)
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AA seq
799 aa
AA seq
DB search
MEIGGAGVLQIRQVLLFFVLLGMSQAGSDSGRFSVAEEMQSGTFVGNLARDLGLEVGELF
SRGARVVSNDNKQRLQLDINTGDLLLSEALDREELCGSTEPCVLHFQILMKSPLQFLRIE
LQVKDINDHSPVFLEKEMLLEIPENSPVGAVFLLESAKDLDVGINALKNYTVSPNSHFHI
KMRVNPDNRKYPELVLDKALDYEEQSELNFILTALDGGSPPKSGSALVRVVVVDINDNPP
EFEQPFYEVKISEDSILGSPVVTVSAWDLDSGKNGEISYMFSHASEDIRKTFEINQKSGE
VSLTSPLDFETTEAYSIIIQATDGGGLFGKSTLRIQVMDVNDNAPEVTVSSITSSIPENS
PEIVVMVFSIRDRDSGENGRMICSVSENLPFVLKSSVENYYTLETERMLDRESQAEYNIT
ITITDMGTPRLKTEHNITVLVADVNDNAPAFTQTSYTLWVRENNSPALHIGTVSATDTDA
GANAQVTYSLLPPPDPHLPLASLVSINPDNGHLFVLTSLDYEALQAFEFLVGAADRGSPA
LSSQALVRVLVEDANDNAPFVLYPLQNASAPCTELVPRAAEPGYLVTKVVAVDGDAGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAPKQRLVVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPPPEAEAAAAAPADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRGGA
GSAGRCPVPEGHFPGHLVDVSGTGTLSQSYQYEVCLTGGTXKNEFKFLKPILPNLSTQRP
GKETEENHTSYNSFGFNIQ
NT seq
2399 nt
NT seq
+upstream
nt +downstream
nt
atggagattggaggggcaggcgttctgcagataaggcaagtcctgcttttctttgttttg
ctggggatgtctcaagcggggtctgactctgggcgcttctcagtggcagaggaaatgcag
agtgggacctttgtaggcaatctggcaagagacctggggctggaagtgggtgaactattc
tccagaggggctcgggtggtatctaatgataacaaacagcgattgcagctggacataaat
acaggggatttgctcttaagtgaagcactagaccgggaggagctctgtggctccaccgag
ccctgtgtgctgcatttccagatattaatgaaaagccccttgcagtttttacggattgag
ctccaggtcaaggatataaatgatcactctcctgtcttcttagaaaaagaaatgctctta
gaaatcccagagaatagtcctgtcggtgctgtcttcttactagaaagtgcaaaggatttg
gatgtaggaatcaacgctctaaaaaactacacagtaagccccaactctcatttccacatt
aaaatgagagtcaatccggataacaggaaatacccagagttagttctggataaagcgctg
gattatgaagaacagtctgaactcaatttcatcctcaccgctctggatggcgggtctccg
cctaagtctgggagtgccttggtccgggtggtggtcgtggacattaatgacaacccccct
gagtttgagcagccattttatgaggtgaagatttcagaagatagcattctcggctcaccg
gttgtcacggtctcagcttgggacttagattcggggaaaaacggggaaatatcatatatg
ttttcccatgcctcagaagatattcgcaagacatttgaaattaaccaaaagtctggagaa
gtgagtttaacttcacccttggattttgaaacaactgaagcatattccataatcattcaa
gccacagatgggggaggcctttttggaaaatcaacactcagaattcaggtgatggatgtg
aatgacaatgctcctgaagtgactgtgtcatcaattaccagttcaatcccagaaaattct
ccggagattgtggttatggtttttagtatccgagacagagactctggggagaatgggagg
atgatttgttctgtttcagaaaacctcccgttcgtgctaaaatcttcagttgagaattac
tacacgttggaaacggaaagaatgctggacagggaaagccaagcggagtacaacatcacg
atcacgatcactgacatgggaactcccaggctgaaaaccgagcacaacataaccgtgctg
gtggccgacgtcaacgacaacgcccccgccttcacccagacctcctacaccctgtgggtc
cgcgagaacaacagccccgccctgcacatcggcaccgtcagcgccacagacacagacgcg
ggcgccaacgcccaggtcacctactcgctgctgccgccgccagacccgcacctgcctctc
gcctccctcgtgtccatcaaccccgacaacggccacctcttcgtcctcacgtccctggac
tacgaggccctgcaggccttcgagttcctcgtgggcgccgccgaccgcggctcgcccgcg
ctcagcagccaggcgctggtgcgcgtgctcgtggaggacgccaacgacaacgcgcccttc
gtgctctacccgctgcagaacgcctcggcgccctgcaccgagctggtgcccagggcggcc
gagcccggctacctggtgaccaaggtggtggcggtggacggcgacgcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcac
aacggcgaggtgcgcacggcgcggctgctgagcgagcgcgacgcgcccaagcagcggctg
gtggtgctggtcaaggacaacggcgagccgccgctgtcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccgcccccggaagcggaagcggcggcc
gcggcgccggccgacccgctcaccgtctacctggtggtggccttggcgtcggtgtcgtcg
ctcttcctcttctcggtgctggtgttcgtggcggtgcggctgtgcaggaggggcggggcg
ggctcggcgggtcgctgcccggtgcccgagggccacttcccgggccacctggtggacgtc
agcggcacggggaccctgtcccagagctaccagtacgaggtgtgtctgacgggaggtact
gtaagaatgagttcaaattcttgaagccgattctccccaatctctcgacccaacgccctg
ggaaagaaacagaggaaaatcatacttcctacaatagctttgggttcaatattcagtga
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