Cervus canadensis (wapiti): 122439802
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Entry
122439802 CDS
T07554
Symbol
PCDHB8
Name
(RefSeq) protocadherin beta-8
KO
K16494
protocadherin beta
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccad04515
]
122439802 (PCDHB8)
Cell adhesion molecules [BR:
ccad04515
]
Cadherins
Protocadherins
122439802 (PCDHB8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
122439802
NCBI-ProteinID:
XP_043321194
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All DBs
Position
4:complement(56488069..56490555)
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AA seq
775 aa
AA seq
DB search
MEASRKLVCRQRQVLFFFLFLHLALAGIEFRRYSVVEEAEGSSFVTNLAKDLGLGQGELS
RRGTRVISKGNKLYLQLDQESGDLLLNEKLDREELCGQSEPCVLRFQVLLENPLEFFQAE
LQVIDINDHTPVFMDGDMLLKISESSLPGTTFPLKNAQDMDVGQNNIENYIISPNSYFRV
LTRKRSDGRKYPELVLDKVLDREEEAELRLTLTAQDGGSPPRSGTAHVYIEVIDINDNAP
EFEQPFYRIKIPEDSPKGFLVVKVSATDVDIGVNGEISYSLSQASEDISKTFEINAMTGE
IRLKKQLDFETTQSYEVNIEARDTGSLSGKCTVLIQVVDVNDNAPEVTMSALTGQIPENS
PETVVAVFSVSDLDSEENGKVSCSIQYDLPFLLKSSMENFYTLVTERPLDRETRAEYNIT
ITVTDLGTPRLKTQHNITVLVSDVNDNAPAFTQTSYTLWVRENNSPALHIGSVSATDTDA
GANAQVTYSLLPPPDPHLPLASLVSINPDNGHLFALTSLDYEALRAFEFRVGAADRGSPA
LSSQALVRLLVEDANDNAPFVLYPLQNASAPCTELVPRAAEPGYLVTKVVAVDGDAGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAPKQRLVVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPPPEAEAAAAAPADPLTVYLVVALASVSSLFLFSMLVFVAVRLCRRGGA
GSAGRCPVPEGHFPGHLVDVSGTGTLSQSYQYEVCLTRGSGTGEFEFLKPVVPNF
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagcaggaagctcgtttgcagacaaaggcaagtccttttcttctttctcttc
ttacacttagctctggcgggcattgaatttaggcgttattctgtggtggaggaagctgaa
gggagctcttttgtaaccaatttagcaaaagacttgggtctggggcagggggaactctcc
aggcggggaacaagggtcatttccaaagggaacaaactgtatttgcagctggatcaggag
tctggggatttactgctaaatgagaaactggaccgcgaggaactgtgtggtcagagcgaa
ccatgtgtgctgcgtttccaggttttgctagagaatcccttagagttttttcaagctgag
ctacaggtaatagacataaatgaccatactccagtgttcatggacggagatatgttgtta
aaaatatcagagagcagtcttcctggcactacatttcctctgaagaatgctcaggacatg
gatgtaggccaaaataatattgaaaattatataatcagtcccaactcctattttcgggtc
ctcactcgcaaacgcagcgatggcagaaaatatccggaacttgtgctggacaaagtgctg
gatcgcgaggaggaagctgagctcaggttaaccctcactgctcaggatggtggttctcca
ccacggtctggcaccgctcacgtctacatagaagtcatagacatcaatgataacgcccct
gaatttgagcagcctttctacagaataaagatccctgaggacagtcccaaaggcttcctt
gttgtcaaagtctctgctaccgatgtagacataggagtcaatggagagatttcctattca
ctttcccaggcttcagaagacatcagcaaaacctttgagatcaatgccatgactggagag
attcgactgaaaaaacaacttgatttcgaaacaactcagtcctatgaggtcaatatcgag
gccagagatactggaagcctttctggaaaatgtaccgttctgattcaagtcgtggatgtg
aacgacaatgccccagaagtcaccatgtctgcacttaccggacagatccctgagaactcg
cctgagactgtggttgcagttttcagtgtttcagatcttgactctgaagagaatggtaaa
gtaagttgctccattcagtacgatctaccgtttttgctgaaatcttccatggaaaatttt
tacactctagtaacagagcgaccgctagacagagagaccagagccgaatacaacatcacg
atcacggtcacggacttggggacacccagactgaaaacccagcacaacataaccgtgctg
gtgtccgacgtcaacgacaacgcccccgccttcacccagacctcctacaccctgtgggtc
cgcgagaacaacagccccgccctgcacatcggcagcgtcagcgccacagacacagacgcg
ggcgccaacgcccaggtcacctactcgctgctgccgccgccagacccgcacctgcccctc
gcctccctcgtgtccatcaaccccgacaatggccacctcttcgccctcacgtccctggac
tacgaggccctgcgggccttcgagttccgcgtgggcgccgccgaccgcggctcgcccgcg
ctcagcagccaggcgctggtgcgcctgctcgtggaggacgccaacgacaacgcgcccttc
gtgctctacccgctgcagaacgcctcggcgccctgcaccgagctggtgcccagggcggcc
gagcccggctacctggtgaccaaggtggtggcggtggacggcgacgcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcac
aacggcgaggtgcgcacggcgcggctgctgagcgagcgcgacgcgcccaagcagcggctg
gtggtgctggtcaaggacaacggcgagccgccgctgtcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccgcccccggaagcggaagcggcggcc
gcggcgccggccgacccgctcaccgtctacctggtggtggccttggcgtcggtgtcgtcg
ctcttcctcttctcgatgctggtgttcgtggcggtgcggctgtgcaggaggggcggggcg
ggctcggcgggtcgctgcccggtgcccgagggccacttcccgggccacctggtggacgtc
agcggcacggggaccctgtcccagagctaccagtacgaggtgtgtctgacgagaggctct
ggtactggcgagttcgaattcctgaagccagttgtacccaacttttag
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