Cervus canadensis (wapiti): 122439804
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Entry
122439804 CDS
T07554
Symbol
PCDHB4
Name
(RefSeq) protocadherin beta-4
KO
K16494
protocadherin beta
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccad04515
]
122439804 (PCDHB4)
Cell adhesion molecules [BR:
ccad04515
]
Cadherins
Protocadherins
122439804 (PCDHB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
122439804
NCBI-ProteinID:
XP_043321195
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All DBs
Position
4:complement(56552298..56556470)
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AA seq
796 aa
AA seq
DB search
METLERLQPNRQVTTFILTVFLSQANPALIRYSVLEETESGSFIAHLTKDLGLGIGELNA
RSARVVCDDDKQRLLLDRQTGDLLLREKLDREDICGSVEPCVLHFQVFLETPVQFFEGEL
LIQDINDHSPVFPSREMLLKILENSQPGTVFPLKLAQDLDVGSNGLQKYTINANSHFHVL
TRNHSDGKKYPDLVQDKVLDREEQSEFSLTLMALDGGSPPRSSTSMVRILILDVNDNAPE
FVHTPYEVQVLENSPLDFLIVTVLAMDVDAGNFGTVSYSLFQASEEIKQTFSINEVTGEI
RLTKKLDFEQIKSYHVETEATDGGGLSGKGTVVIEVVDVNDNAPELTISSLISSIPENAP
ETVVSIFRIRDRDSGDNGKMICSIPDNLPFILRPTFKNFYTLVTDSPLDRESQAEYNITI
TVTDMGTPRLKTQHNITVLVADVNDNAPAFTQTSYTLWVRENNSPALHIGTVSATDTDAG
ANAQVTYSLLPPPDPHLPLASLVSINPDNGHLFALTSLDYEALRAFEFRVGAADRGWPAL
SSQALVRVLVEDANDNAPFVLYPLQNASAPCTELVPRAAEPSYLVTKVVAVDGDAGQNAW
LSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAPKQRLVVLVKDNGEPPLSASVTLHVL
LVDGFSQPYLPPPEAEAAAAAPADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRGGAG
SAGRCPVPEGHFPGHLVDVSGTGTLSQSYQYEVCLTGDHRTGEFKFLKPIFPNLLVQDTE
REIKESPNCRNSFVFS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggagacgctagagagactccaacccaacaggcaagtgaccacctttattttgacggta
ttcttgtctcaggctaaccctgcgcttattcgttattctgttctggaagaaacagagagc
ggctcctttatagcccatttaaccaaggacctgggcctgggaattggggagctgaacgcc
cggtcggctcgggtggtttgtgacgatgacaagcagcgcttgctgctggatcgtcagact
ggagatttgcttttgagggagaaactagaccgggaagacatatgtggctccgttgaaccc
tgtgtgctgcatttccaagtattcctggaaactccagtgcaattttttgaaggagaatta
ttaatacaggacataaatgaccactccccagtattcccgagtagggaaatgcttctgaaa
atactggaaaacagccagccagggactgtatttccgttgaaattagctcaggatttggat
gtgggtagcaacggtcttcaaaaatacactatcaacgccaattctcattttcacgttctc
actcgaaatcacagtgatggcaagaaatatccagatttggtgcaggacaaagtgctggat
cgagaggagcagtcagagttcagcttaaccctaatggcgctggatggtgggtctccacct
aggtccagcaccagcatggtgcgaatcctgatcttggacgtcaatgacaatgctcccgag
tttgtgcacactccatatgaggtgcaggttctggaaaacagccccctagatttcctaata
gttacagttttagctatggatgtagatgctgggaactttgggactgtttcctatagcttg
ttccaagcatcagaggaaattaaacaaactttctcaataaatgaagtcacaggagaaatc
cgactgacaaagaaattggattttgaacaaatcaaatcttaccacgtggaaactgaggct
acagatggaggaggcctttctgggaaaggcactgtggtcatagaggtggtagatgtgaat
gacaatgccccagaacttaccatatcttcactcattagctccatcccagaaaatgccccg
gagaccgtagtctctatcttccgaattcgagatagagactccggagacaatggaaagatg
atttgctccattccagacaacctgccatttattctaagaccgactttcaagaatttctac
accctggtaaccgatagccctcttgacagagaaagtcaagccgagtacaacatcaccatt
acggtcactgacatgggaacccccagactgaaaacccagcacaacataaccgtgctggtg
gccgacgtcaacgacaacgcccccgccttcacccagacctcctacaccctgtgggtccgc
gagaacaacagccccgccctgcacatcggcaccgtcagcgccacagacacagacgcgggc
gccaacgcccaggtcacctactcgctgctgccgccgcccgacccgcacctgcccctcgcc
tccctcgtgtccatcaaccccgacaacggccacctcttcgccctcacgtccctggactac
gaggccctgcgggccttcgagttccgcgtgggcgccgccgaccgcggctggcccgcgctc
agcagccaggcgctggtgcgcgtgctcgtggaggacgccaacgacaacgcgcccttcgtg
ctctacccgctgcagaacgcctcggcgccctgcaccgagctggtgcccagggcggccgag
cccagctacctggtgaccaaggtggtggcggtggacggcgacgcgggccagaacgcctgg
ctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaac
ggcgaggtgcgcacggcgcggctgctgagcgagcgcgacgcgcccaagcagcggctggtg
gtgctggtcaaggacaacggcgagccgccgctgtcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccctacctgccgcccccggaagcggaagcggcggccgcg
gcgccggccgacccgctcaccgtctacctggtggtggccttggcgtcggtgtcgtcgctc
ttcctcttctcggtgctggtgttcgtggcggtgcggctgtgcaggaggggcggggcgggc
tcggcgggtcgctgcccggtgcccgagggccacttcccgggccacctggtggacgtcagc
ggcacggggaccctgtcccagagctaccagtacgaggtgtgtctgacgggagaccataga
actggtgagttcaaattcctgaagccaatattccctaacctcttggttcaggacactgag
agagaaatcaaggaaagccccaactgtagaaacagctttgtattcagttaa
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